Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 8.9e-81 303.5 151 100.0
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.4e-80 301.2 151 99.3
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.4e-54 216.5 149 71.1
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.9e-54 216.1 146 72.6
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.3e-31 140.2 143 51.0
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 1.7e-31 139.8 143 51.0
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.4e-30 136.7 143 51.0
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 1.6e-29 133.3 143 49.7
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 2.7e-29 132.5 146 49.3
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 2.7e-29 132.5 145 49.0
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 6.1e-29 131.3 151 47.7
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 7.9e-29 131.0 143 47.6
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 7.9e-29 131.0 148 47.3
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 7.9e-29 131.0 146 47.9
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 1.4e-28 130.2 145 46.9
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 1.8e-28 129.8 147 47.6
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 1.8e-28 129.8 132 56.1
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.8e-28 129.8 143 49.0
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 2.3e-28 129.4 146 47.9
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.3e-28 129.4 148 46.6
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.3e-28 129.4 148 46.6
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 2.3e-28 129.4 140 48.6
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 2.3e-28 129.4 146 47.3
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 3.9e-28 128.6 145 48.3
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 5.1e-28 128.3 146 45.9
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 8.8e-28 127.5 148 43.9
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 8.8e-28 127.5 140 47.9
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 1.1e-27 127.1 117 53.8
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.1e-27 127.1 117 53.8
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 1.5e-27 126.7 144 47.2
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.5e-27 126.7 144 45.1
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 2.0e-27 126.3 146 45.9
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 2.0e-27 126.3 146 45.2
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 2.0e-27 126.3 117 53.8
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 2.6e-27 125.9 145 45.5
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 2.6e-27 125.9 144 46.5
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 2.6e-27 125.9 117 53.8
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 2.6e-27 125.9 144 46.5
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.3e-27 125.6 117 53.8
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 4.4e-27 125.2 147 45.6
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 4.4e-27 125.2 148 46.6
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 5.7e-27 124.8 141 44.7
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 7.4e-27 124.4 145 43.4
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 9.7e-27 124.0 148 45.9
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 9.7e-27 124.0 117 53.0
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 1.3e-26 123.6 145 44.1
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 1.7e-26 123.2 146 45.9
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 1.7e-26 123.2 147 44.9
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 1.7e-26 123.2 143 45.5
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.7e-26 123.2 145 44.1
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 2.2e-26 122.9 117 53.0
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 2.8e-26 122.5 124 50.8
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 2.8e-26 122.5 148 43.9
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 2.8e-26 122.5 148 45.9
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 2.8e-26 122.5 149 44.3
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 2.8e-26 122.5 146 46.6
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 3.7e-26 122.1 147 44.9
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 3.7e-26 122.1 144 43.8
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 6.3e-26 121.3 140 47.1
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 6.3e-26 121.3 145 44.1
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 8.2e-26 120.9 144 45.8
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 1.1e-25 120.6 145 44.1
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 1.8e-25 119.8 117 49.6
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 3.1e-25 119.0 164 41.5
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 9.1e-25 117.5 145 42.8
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 9.1e-25 117.5 146 44.5
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 9.1e-25 117.5 117 49.6
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 9.1e-25 117.5 145 43.4
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 2.0e-24 116.3 144 41.7
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 4.5e-24 115.2 128 47.7
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 4.5e-24 115.2 141 45.4
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 5.9e-24 114.8 142 43.0
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 7.7e-24 114.4 145 41.4
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 1.0e-23 114.0 146 42.5
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 1.7e-23 113.2 117 47.0
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 3.8e-23 112.1 183 37.2
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 1.1e-22 110.5 145 43.4
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 5.5e-22 108.2 113 48.7
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 9.4e-22 107.5 95 54.7
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 1.2e-21 107.1 98 55.1
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 1.2e-21 107.1 94 54.3
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 1.6e-21 106.7 138 46.4
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 2.7e-21 105.9 121 47.1
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 4.7e-21 105.1 113 47.8
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 3.0e-20 102.4 151 43.0
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 6.7e-20 101.3 112 47.3
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 5.7e-19 98.2 153 37.3
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.3e-18 97.1 114 44.7
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.4e-17 93.6 125 43.2
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 2.0e-16 89.7 132 34.8
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 2.6e-16 89.4 134 34.3
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 3.5e-16 89.0 115 47.0
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 5.9e-16 88.2 113 39.8
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.7e-15 86.7 113 39.8
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.8e-15 85.5 124 35.5
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 2.5e-14 82.8 105 42.9
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.3e-12 76.3 132 31.1
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 8.8e-12 74.3 83 50.6
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 1.2e-11 73.9 90 42.2
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 1.2e-11 73.9 54 57.4
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 7.5e-11 71.2 99 35.4
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.7e-10 70.1 136 33.1
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 2.2e-10 69.7 123 33.3
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 3.1e-09 65.9 120 35.8
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.5e-08 62.0 133 27.1
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 3.8e-07 58.9 84 40.5


User provided reference genes

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