Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 5.4e-47 190.7 96 100.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.5e-46 188.0 96 97.9
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.5e-41 172.6 96 90.6
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 4.5e-38 161.0 96 86.5
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.3e-37 159.5 96 85.4
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 5.0e-37 157.5 96 86.5
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 3.4e-33 144.8 84 89.3
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 7.5e-33 143.7 94 79.8
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 2.2e-32 142.1 94 78.7
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 2.2e-32 142.1 86 82.6
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.9e-32 141.7 94 79.8
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 2.9e-32 141.7 94 76.6
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 2.9e-32 141.7 95 80.0
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 2.9e-32 141.7 84 86.9
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 4.9e-32 141.0 84 84.5
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 6.4e-32 140.6 90 77.8
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 8.3e-32 140.2 94 78.7
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 1.1e-31 139.8 91 79.1
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.1e-31 139.8 80 90.0
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.4e-31 139.4 90 80.0
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 1.9e-31 139.0 94 71.3
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.9e-31 139.0 92 78.3
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 2.4e-31 138.7 90 80.0
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 83 85.5
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 83 85.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.4e-31 138.7 83 85.5
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 3.2e-31 138.3 91 79.1
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.2e-31 138.3 91 79.1
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 3.2e-31 138.3 86 82.6
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 3.2e-31 138.3 89 73.0
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 4.1e-31 137.9 84 84.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 4.1e-31 137.9 91 74.7
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 5.4e-31 137.5 94 76.6
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.4e-31 137.5 94 76.6
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 9.2e-31 136.7 91 78.0
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 9.2e-31 136.7 94 76.6
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 75.5
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 1.2e-30 136.3 83 84.3
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.2e-30 136.3 90 78.9
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.2e-30 136.3 85 82.4
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 1.2e-30 136.3 84 83.3
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.6e-30 136.0 84 81.0
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.6e-30 136.0 77 85.7
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.0e-30 135.6 84 81.0
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 3.5e-30 134.8 93 68.8
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.5e-30 134.8 84 79.8
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.5e-30 134.8 91 78.0
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 3.5e-30 134.8 94 73.4
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 3.5e-30 134.8 86 74.4
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 3.5e-30 134.8 90 77.8
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.6e-30 134.4 82 76.8
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.6e-30 134.4 82 76.8
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 4.6e-30 134.4 82 76.8
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 4.6e-30 134.4 94 76.6
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 4.6e-30 134.4 84 83.3
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 4.6e-30 134.4 78 83.3
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 6.0e-30 134.0 77 85.7
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 6.0e-30 134.0 94 76.6
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 6.0e-30 134.0 87 72.4
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 6.0e-30 134.0 94 75.5
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.0e-30 134.0 94 74.5
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 6.0e-30 134.0 92 78.3
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 7.8e-30 133.7 82 76.8
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.0e-29 133.3 82 75.6
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.0e-29 133.3 84 84.5
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 1.3e-29 132.9 84 81.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-29 132.5 82 75.6
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 1.7e-29 132.5 82 75.6
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 1.7e-29 132.5 82 75.6
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 2.3e-29 132.1 84 77.4
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 2.3e-29 132.1 83 79.5
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.0e-29 131.7 87 79.3
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 3.0e-29 131.7 81 75.3
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.9e-29 131.3 83 80.7
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.9e-29 131.3 83 80.7
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 3.9e-29 131.3 87 79.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 3.9e-29 131.3 76 82.9
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 5.0e-29 131.0 85 71.8
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 6.6e-29 130.6 82 74.4
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 8.6e-29 130.2 82 81.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.5e-28 129.4 94 72.3
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.9e-28 129.0 99 71.7
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.5e-28 128.6 90 75.6
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 3.3e-28 128.3 82 74.4
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 3.3e-28 128.3 82 74.4
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 4.3e-28 127.9 82 74.4
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 4.3e-28 127.9 82 74.4
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 4.3e-28 127.9 82 74.4
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 4.3e-28 127.9 82 74.4
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 5.6e-28 127.5 76 82.9
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 7.3e-28 127.1 83 73.5
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 7.3e-28 127.1 82 79.3
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 7.3e-28 127.1 86 73.3
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 1.2e-27 126.3 78 78.2
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.6e-27 125.9 82 72.0
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.1e-27 125.6 109 65.1
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.1e-27 125.6 89 69.7
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 3.6e-27 124.8 70 85.7
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 4.7e-27 124.4 83 72.3
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 6.2e-27 124.0 74 79.7
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.1e-26 123.2 74 85.1
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.8e-26 122.5 70 82.9
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.3e-26 122.1 105 66.7
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.1e-26 121.7 108 62.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 3.1e-26 121.7 76 82.9
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 5.2e-26 120.9 77 81.8
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 1.5e-25 119.4 77 83.1
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.3e-24 116.3 72 77.8
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.7e-24 115.9 70 78.6
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 2.2e-24 115.5 110 62.7
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.9e-24 115.2 78 75.6
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 3.7e-24 114.8 78 79.5
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 6.4e-24 114.0 68 82.4
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.1e-23 111.3 68 80.9
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 7.1e-23 110.5 78 75.6
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.0e-21 106.7 64 79.7
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 2.3e-21 105.5 66 77.3
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 9.5e-20 100.1 83 60.2
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 6.2e-19 97.4 71 70.4
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 2.2e-16 89.0 94 58.5
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 3.7e-16 88.2 76 63.2
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 9.2e-15 83.6 65 69.2
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.5e-12 75.5 47 76.6
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 3.3e-12 75.1 92 43.5
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 9.6e-12 73.6 61 55.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 3.1e-10 68.6 57 59.6
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 5.2e-10 67.8 68 52.9
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 4.4e-09 64.7 48 70.8
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-08 62.8 48 62.5
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-08 62.8 48 62.5
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-08 62.8 48 62.5


User provided reference genes

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