Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.1e-79 298.5 161 100.0
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.0e-62 242.7 163 82.2
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.4e-62 241.9 142 93.7
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 3.4e-62 241.9 142 89.4
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 2.7e-59 232.3 142 85.2
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.4e-52 209.9 142 79.6
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 3.1e-39 165.6 145 65.5
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 2.6e-38 162.5 144 66.0
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.2e-37 159.5 143 68.5
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.4e-36 156.8 141 64.5
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 4.2e-36 155.2 142 64.8
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 4.2e-36 155.2 173 56.6
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.2e-35 153.7 143 62.2
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 3.5e-35 152.1 144 62.5
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 3.5e-35 152.1 145 63.4
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 4.6e-35 151.8 147 60.5
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 7.9e-35 151.0 147 62.6
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.0e-34 150.6 145 62.1
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.8e-34 149.8 140 62.9
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.8e-34 149.8 146 63.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 3.0e-34 149.1 145 60.0
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 5.1e-34 148.3 145 61.4
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 5.1e-34 148.3 146 61.0
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 8.7e-34 147.5 145 62.1
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 1.1e-33 147.1 147 59.2
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.1e-33 147.1 145 63.4
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.5e-33 146.7 145 58.6
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 3.3e-33 145.6 154 58.4
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 3.3e-33 145.6 142 59.9
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 3.3e-33 145.6 147 59.9
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 3.3e-33 145.6 145 59.3
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 3.3e-33 145.6 143 62.2
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 3.3e-33 145.6 146 61.6
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 9.7e-33 144.1 144 63.2
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 9.7e-33 144.1 152 59.2
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 9.7e-33 144.1 150 60.7
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.3e-32 143.7 145 59.3
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.6e-32 143.3 144 60.4
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.6e-32 143.3 147 59.2
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.8e-32 142.5 142 59.2
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.8e-32 142.5 147 58.5
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 3.7e-32 142.1 147 59.9
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 3.7e-32 142.1 143 59.4
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 4.8e-32 141.7 145 57.9
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 4.8e-32 141.7 105 74.3
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 4.8e-32 141.7 144 59.0
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 6.3e-32 141.4 145 58.6
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 6.3e-32 141.4 148 60.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 8.2e-32 141.0 145 59.3
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.4e-31 140.2 145 62.8
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.8e-31 139.8 145 62.1
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.4e-31 139.4 145 55.9
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 2.4e-31 139.4 141 55.3
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 2.4e-31 139.4 145 60.0
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 3.1e-31 139.0 141 58.2
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 3.1e-31 139.0 146 60.3
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 4.1e-31 138.7 149 56.4
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 4.1e-31 138.7 148 56.8
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 4.1e-31 138.7 145 59.3
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 5.3e-31 138.3 145 60.0
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 6.9e-31 137.9 136 61.8
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.2e-30 137.1 149 57.7
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 5.9e-30 134.8 149 55.7
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 5.9e-30 134.8 138 58.7
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 5.9e-30 134.8 120 65.0
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.0e-29 134.0 141 58.9
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 1.3e-29 133.7 112 65.2
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.3e-29 133.7 147 57.1
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.7e-29 133.3 144 56.9
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 3.8e-29 132.1 152 55.3
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 6.5e-29 131.3 142 54.9
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 6.5e-29 131.3 146 55.5
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 2.5e-28 129.4 153 56.9
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.2e-28 128.6 132 60.6
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 4.2e-28 128.6 147 54.4
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 5.5e-28 128.3 145 55.2
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 5.5e-28 128.3 155 54.8
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 7.2e-28 127.9 153 56.2
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 7.2e-28 127.9 153 56.2
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 7.2e-28 127.9 144 54.2
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 9.3e-28 127.5 155 55.5
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 9.3e-28 127.5 155 55.5
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.2e-27 127.1 132 59.8
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.2e-27 127.1 145 56.6
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.6e-27 126.7 131 56.5
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.6e-27 126.7 152 55.9
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.7e-27 125.9 132 59.1
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.7e-27 125.9 129 58.1
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 7.9e-27 124.4 153 52.9
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.0e-26 124.0 152 53.3
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 2.5e-25 119.4 86 65.1
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 5.7e-25 118.2 99 67.7
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 7.4e-25 117.9 82 73.2
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 9.7e-25 117.5 132 53.0
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 9.7e-25 117.5 103 61.2
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 3.1e-23 112.5 99 62.6
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 5.3e-23 111.7 118 55.1
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 5.9e-22 108.2 92 67.4
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.7e-21 106.7 72 77.8
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.7e-21 106.7 87 66.7
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 2.7e-19 99.4 142 43.7
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 4.7e-19 98.6 132 49.2
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.0e-18 97.4 83 63.9
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 2.6e-17 92.8 82 53.7
Peaxi162Scf00447g00114 Petunia axillaris HOM05D000049 ORTHO05D008785 7.4e-17 91.3 60 81.7
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.7e-16 90.1 90 58.9
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 4.1e-15 85.5 114 47.4
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.0e-14 83.2 108 49.1
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 2.6e-14 82.8 86 51.2
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 2.2e-13 79.7 85 51.8
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 2.5e-12 76.3 82 47.6
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 4.2e-12 75.5 55 70.9
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 4.2e-12 75.5 107 43.0
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 6.1e-11 71.6 83 44.6
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.8e-10 70.1 126 42.9
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.4e-09 65.5 63 60.3


User provided reference genes

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