Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 6.5e-73 277.3 143 100.0
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.4e-66 255.0 143 91.6
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 6.8e-46 187.6 143 71.3
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 1.0e-41 173.7 143 67.8
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 5.0e-41 171.4 142 64.8
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 1.2e-37 160.2 94 81.9
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.8e-27 126.3 93 69.9
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.4e-27 125.9 93 68.8
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 6.2e-23 111.3 152 51.3
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.2e-21 107.1 153 47.7
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.5e-21 106.7 98 57.1
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 3.4e-21 105.5 91 57.1
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 4.6e-18 95.1 95 52.6
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 1.3e-17 93.6 92 54.3
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 3.9e-17 92.0 133 45.1
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 1.5e-16 90.1 80 60.0
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 3.3e-16 89.0 142 39.4
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 9.5e-16 87.4 94 46.8
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 1.2e-15 87.0 83 50.6
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.7e-15 85.1 149 40.3
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.1e-14 84.0 119 41.2
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 2.3e-14 82.8 136 42.6
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 2.3e-14 82.8 136 41.2
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 2.3e-14 82.8 147 40.8
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.0e-14 82.0 144 41.0
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 6.8e-14 81.3 139 37.4
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 8.9e-14 80.9 132 43.2
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.2e-13 80.5 139 38.1
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.5e-13 80.1 139 38.8
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 2.0e-13 79.7 114 42.1
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 4.4e-13 78.6 91 45.1
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 9.9e-13 77.4 143 38.5
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.7e-12 76.6 147 36.1
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 2.2e-12 76.3 87 48.3
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 2.2e-12 76.3 91 44.0
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 2.9e-12 75.9 88 44.3
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 2.9e-12 75.9 95 47.4
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.4e-11 73.6 81 50.6
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.9e-11 73.2 144 37.5
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 4.1e-11 72.0 107 38.3
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 5.4e-11 71.6 121 37.2
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 5.4e-11 71.6 100 39.0
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 7.1e-11 71.2 128 35.9
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 7.1e-11 71.2 98 37.8
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.2e-10 70.5 129 38.0
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 2.1e-10 69.7 140 35.7
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 2.7e-10 69.3 145 36.6
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 2.7e-10 69.3 144 37.5
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 3.5e-10 68.9 129 34.9
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 3.5e-10 68.9 75 46.7
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 4.6e-10 68.6 94 41.5
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 1.0e-09 67.4 143 34.3
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 1.0e-09 67.4 68 48.5
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 1.3e-09 67.0 138 36.2
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 1.3e-09 67.0 138 34.8
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 1.3e-09 67.0 104 44.2
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 1.7e-09 66.6 127 36.2
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 3.0e-09 65.9 95 44.2
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 3.0e-09 65.9 94 40.4
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 3.9e-09 65.5 131 38.2
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 5.1e-09 65.1 86 39.5
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 5.1e-09 65.1 143 34.3
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 5.1e-09 65.1 125 38.4
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 8.6e-09 64.3 49 61.2
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 1.1e-08 63.9 101 38.6
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 1.5e-08 63.5 92 35.9
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.5e-08 63.5 94 40.4
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.5e-08 62.8 86 38.4
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.5e-08 62.8 96 38.5
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 3.3e-08 62.4 103 38.8
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 7.3e-08 61.2 146 33.6
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 9.5e-08 60.8 128 35.9
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 9.5e-08 60.8 140 34.3
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.1e-07 59.7 100 40.0
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 1.1e-06 57.4 138 31.2
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 1.8e-06 56.6 77 37.7
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.8e-06 56.6 138 30.4
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 2.4e-06 56.2 108 31.5
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 2.4e-06 56.2 93 33.3
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 8.9e-06 54.3 100 37.0


User provided reference genes

Program Settings