Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.6e-175 617.8 327 100.0
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.7e-148 528.5 324 89.5
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 2.8e-103 379.4 335 69.6
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 6.0e-98 361.7 331 67.7
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 2.2e-76 290.0 259 69.1
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 4.5e-53 212.6 351 42.5
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.5e-51 206.8 346 45.7
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.7e-47 193.0 325 42.5
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 6.9e-46 188.7 342 40.4
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 5.1e-41 172.6 364 39.3
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 2.0e-40 170.6 336 35.4
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.2e-39 167.2 346 40.2
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.8e-39 166.8 384 38.8
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 3.7e-39 166.4 321 39.6
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.4e-38 164.5 366 35.8
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.0e-37 160.6 377 36.1
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 4.5e-37 159.5 346 39.0
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.0e-36 158.3 343 38.2
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.7e-36 157.5 368 35.3
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.3e-33 147.1 390 35.6
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 6.3e-31 139.0 365 34.5
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.1e-30 136.7 369 34.7
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.3e-30 136.0 368 35.3
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.6e-29 134.4 364 34.6
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 2.0e-29 134.0 361 35.7
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 5.9e-29 132.5 379 32.5
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 7.7e-29 132.1 364 35.7
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.0e-28 131.7 328 34.5
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.1e-27 128.3 369 34.4
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 4.7e-26 122.9 328 33.8
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 6.1e-26 122.5 355 32.4
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 6.1e-26 122.5 355 32.4
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 2.3e-25 120.6 354 36.2
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 5.2e-25 119.4 292 36.0
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.4e-24 116.7 361 30.2
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.7e-24 115.9 363 34.4
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.7e-23 114.4 382 31.4
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 4.8e-23 112.8 393 31.3
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 8.3e-23 112.1 371 31.5
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 1.1e-22 111.7 358 32.7
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.4e-22 111.3 360 28.6
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.4e-22 111.3 362 30.9
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 3.1e-22 110.2 273 37.4
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 7.0e-22 109.0 389 32.4
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.2e-21 108.2 351 33.3
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.6e-21 107.8 351 31.9
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 2.7e-21 107.1 389 30.8
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 4.5e-21 106.3 358 31.3
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.9e-21 105.9 362 33.1
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.3e-20 104.8 350 29.4
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 3.8e-20 103.2 361 31.0
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.8e-20 103.2 360 31.1
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 8.5e-20 102.1 349 28.4
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.1e-19 101.7 356 31.2
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 3.2e-19 100.1 376 27.7
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 9.4e-19 98.6 336 31.2
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.6e-18 97.8 359 31.5
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.6e-18 97.8 371 31.3
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 2.7e-18 97.1 385 28.6
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.2e-16 91.7 354 31.1
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 2.6e-16 90.5 337 28.5
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 3.4e-16 90.1 351 29.3
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 2.8e-15 87.0 351 30.2
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 4.9e-15 86.3 357 28.0
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 8.3e-15 85.5 335 26.6
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 8.3e-15 85.5 373 28.4
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.1e-14 85.1 205 34.1
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.4e-14 84.7 184 38.0
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.4e-14 84.7 332 26.5
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.8e-14 84.3 335 26.3
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 2.4e-14 84.0 375 28.8
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 2.4e-14 84.0 341 29.3
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 4.1e-14 83.2 365 26.6
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 4.1e-14 83.2 321 29.3
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 7.0e-14 82.4 114 42.1
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.7e-12 77.8 329 30.4
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.3e-12 77.4 335 30.1
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 2.9e-12 77.0 341 31.7
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.5e-11 74.7 115 37.4
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.9e-11 74.3 180 38.3
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.9e-11 74.3 364 27.7
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.9e-11 74.3 144 41.7
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 5.6e-11 72.8 361 26.9
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 7.2e-11 72.4 343 25.9
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 9.5e-11 72.0 352 27.8
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 1.6e-10 71.2 212 36.3
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 4.0e-09 66.6 363 24.8
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 6.8e-09 65.9 382 27.2
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 8.9e-09 65.5 378 26.5
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 8.9e-09 65.5 151 33.1
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 9.8e-08 62.0 361 28.0
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.3e-07 61.6 325 29.5
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.2e-07 60.8 184 30.4
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 2.2e-07 60.8 356 26.1
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 8.3e-07 58.9 327 28.4
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 8.3e-07 58.9 353 26.9
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.1e-06 58.5 342 28.7
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 2.4e-06 57.4 360 25.8
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.4e-06 57.4 366 26.2
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 3.2e-06 57.0 392 26.3
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.1e-06 56.6 102 34.3
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.0e-06 55.8 358 24.3


User provided reference genes

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