Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 0.0e+00 1636.7 826 100.0
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 0.0e+00 1332.0 826 84.6
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 6.1e-256 887.9 828 61.4
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 5.9e-251 871.3 828 59.7
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 6.5e-250 867.8 828 59.5
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 7.9e-248 860.9 822 59.7
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 4.5e-243 845.1 828 58.9
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 1.2e-155 554.7 586 50.9
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 3.9e-130 469.9 531 49.5
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.4e-127 460.7 546 47.8
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 2.6e-126 457.2 502 50.2
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 5.2e-122 443.0 648 42.1
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 1.1e-121 441.8 616 45.1
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 3.8e-117 426.8 529 45.7
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 5.2e-114 416.4 530 45.1
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 3.7e-104 383.6 587 43.3
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 1.7e-101 374.8 533 43.3
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 5.0e-101 373.2 370 54.6
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.3e-100 370.5 530 42.3
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 3.4e-97 360.5 879 33.8
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 4.4e-97 360.1 372 53.5
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 1.3e-96 358.6 540 42.4
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.3e-96 356.3 721 35.5
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 5.8e-89 333.2 559 38.5
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 9.8e-89 332.4 611 37.0
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 9.8e-89 332.4 532 40.2
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 9.8e-89 332.4 401 47.4
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-88 332.0 401 45.9
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 3.2e-87 327.4 418 45.2
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-85 320.5 404 45.0
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.6e-85 319.3 384 45.8
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 3.6e-83 313.9 369 48.2
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 4.7e-83 313.5 368 46.5
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 4.0e-82 310.5 379 47.8
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 6.8e-82 309.7 388 47.4
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 3.4e-81 307.4 372 47.6
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 7.5e-81 306.2 389 46.0
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 9.8e-81 305.8 390 44.9
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 8.3e-80 302.8 576 35.6
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.1e-79 302.4 382 45.5
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 1.9e-79 301.6 400 45.2
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 4.1e-79 300.4 386 46.6
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.3e-77 294.7 610 34.4
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.3e-77 294.7 371 45.3
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 3.0e-77 294.3 460 40.4
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 3.9e-77 293.9 578 36.0
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 7.3e-76 289.7 375 43.7
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 3.1e-74 284.3 415 41.2
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 4.0e-74 283.9 374 44.4
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 2.0e-73 281.6 359 46.0
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 2.1e-70 271.6 300 51.3
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 3.3e-68 264.2 274 52.2
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.2e-65 255.8 373 41.6
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.3e-64 252.3 273 49.5
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 2.2e-64 251.5 455 38.5
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 3.2e-63 247.7 563 33.4
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.2e-62 245.7 331 45.0
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 3.5e-62 244.2 279 50.9
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.3e-60 237.3 337 43.0
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 1.2e-57 229.2 257 49.0
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 9.9e-57 226.1 265 47.2
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 8.4e-56 223.0 260 48.8
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 1.2e-54 219.2 413 36.3
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.6e-54 218.8 593 30.5
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 2.1e-54 218.4 305 43.6
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-53 214.2 442 34.8
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 1.1e-50 206.1 424 35.6
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-50 205.7 255 44.7
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.2e-47 194.5 195 53.3
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 9.3e-47 193.0 321 39.3
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.0e-45 188.0 226 48.2
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 1.6e-43 182.2 190 54.2
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 1.8e-42 178.7 280 41.1
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 4.0e-42 177.6 282 40.8
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 5.5e-39 167.2 242 40.5
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 2.1e-38 165.2 229 41.5
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 4.6e-38 164.1 297 38.7
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 4.8e-35 154.1 292 37.7
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 4.8e-35 154.1 129 59.7
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 6.2e-35 153.7 180 45.6
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 1.4e-34 152.5 197 45.7
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 4.1e-34 151.0 154 55.2
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 4.1e-34 151.0 295 34.6
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.6e-33 146.7 168 51.8
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 1.3e-32 146.0 129 59.7
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.2e-31 141.4 166 50.0
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.2e-31 141.0 158 50.6
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.6e-30 139.0 166 50.0
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-27 129.4 133 52.6
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 9.0e-26 123.2 226 38.5
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 1.2e-25 122.9 234 34.2
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.9e-24 118.2 133 46.6
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.9e-24 118.2 100 57.0
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 2.9e-24 118.2 163 44.2
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 6.5e-24 117.1 151 47.7
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.1e-22 112.1 70 72.9
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 4.6e-22 110.9 148 44.6
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.1e-22 110.5 84 61.9
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 7.9e-22 110.2 163 44.8
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 7.9e-22 110.2 163 41.7
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-21 109.4 107 49.5
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 1.8e-21 109.0 163 41.7
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 2.5e-20 105.1 162 43.8
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 7.4e-20 103.6 163 41.7
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.4e-20 103.6 103 48.5
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 1.3e-19 102.8 157 41.4
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 4.8e-19 100.9 227 31.3
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 8.2e-19 100.1 160 40.6
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 2.4e-18 98.6 165 40.0
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 2.0e-17 95.5 161 39.8
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 7.7e-17 93.6 76 56.6
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.5e-16 90.1 101 45.5
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 1.1e-15 89.7 160 37.5
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 9.4e-15 86.7 91 52.7
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 2.6e-12 78.6 125 39.2
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.7e-12 76.6 77 50.6
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 8.2e-11 73.6 98 43.9
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.1e-10 73.2 169 29.0
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-10 72.8 106 37.7
HanXRQChr03g0083731 Helianthus annuus HOM05D005777 ORTHO05D006854 2.9e-08 65.1 93 37.6
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 2.9e-08 65.1 54 55.6
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 5.0e-08 64.3 84 44.0
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.2e-07 61.2 35 74.3
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 6.1e-06 57.4 42 54.8


User provided reference genes

Program Settings