Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.6e-39 165.6 83 100.0
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 8.8e-38 159.8 80 98.8
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 2.6e-34 148.3 81 88.9
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 6.5e-33 143.7 81 87.7
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 8.5e-33 143.3 81 85.2
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 2.6e-26 121.7 80 71.2
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 2.6e-26 121.7 126 56.3
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 7.7e-26 120.2 77 72.7
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.0e-25 119.8 78 73.1
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.0e-25 119.8 83 71.1
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 1.0e-25 119.8 78 71.8
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.0e-25 119.8 75 77.3
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.3e-25 119.4 75 77.3
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-25 119.4 80 71.2
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.2e-25 118.6 75 76.0
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 2.9e-25 118.2 78 71.8
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 3.8e-25 117.9 78 69.2
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 3.8e-25 117.9 78 70.5
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 5.0e-25 117.5 78 69.2
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 6.5e-25 117.1 80 68.8
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 8.5e-25 116.7 77 70.1
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 8.5e-25 116.7 77 72.7
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 8.5e-25 116.7 76 73.7
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.1e-24 116.3 76 72.4
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.5e-24 115.9 77 72.7
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 1.5e-24 115.9 76 73.7
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.5e-24 115.9 78 70.5
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 2.5e-24 115.2 80 68.8
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 2.5e-24 115.2 77 70.1
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 2.5e-24 115.2 77 71.4
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.2e-24 114.8 77 70.1
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.2e-24 114.8 77 70.1
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 5.5e-24 114.0 77 71.4
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 7.2e-24 113.6 77 68.8
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 7.2e-24 113.6 77 68.8
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 7.2e-24 113.6 77 68.8
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 7.2e-24 113.6 77 67.5
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 7.2e-24 113.6 77 67.5
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 7.2e-24 113.6 80 67.5
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 9.4e-24 113.2 77 71.4
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 9.4e-24 113.2 80 66.2
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 1.2e-23 112.8 77 67.5
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.6e-23 112.5 77 68.8
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.6e-23 112.5 83 65.1
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 68.8
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 68.8
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 68.8
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 68.8
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 68.8
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 2.1e-23 112.1 77 71.4
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 2.7e-23 111.7 80 65.0
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 2.7e-23 111.7 77 68.8
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 3.6e-23 111.3 83 63.9
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 4.7e-23 110.9 77 70.1
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 4.7e-23 110.9 77 66.2
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 67.5
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 70.1
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 66.2
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 66.2
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 66.2
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 66.2
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 66.2
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 66.2
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 6.1e-23 110.5 79 67.1
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 6.1e-23 110.5 79 67.1
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 8.0e-23 110.2 83 65.1
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 8.0e-23 110.2 83 62.7
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 8.0e-23 110.2 77 66.2
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 8.0e-23 110.2 77 66.2
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 8.0e-23 110.2 77 66.2
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.0e-22 109.8 77 66.2
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 1.0e-22 109.8 77 67.5
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.0e-22 109.8 77 67.5
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 1.0e-22 109.8 77 67.5
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.0e-22 109.8 77 67.5
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 1.4e-22 109.4 71 71.8
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.4e-22 109.4 75 69.3
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 1.8e-22 109.0 77 67.5
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.8e-22 109.0 95 60.0
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.8e-22 109.0 77 66.2
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 3.0e-22 108.2 70 74.3
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 4.0e-22 107.8 73 68.5
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 4.0e-22 107.8 74 67.6
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 5.2e-22 107.5 76 67.1
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 5.2e-22 107.5 74 67.6
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 6.7e-22 107.1 76 69.7
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 6.7e-22 107.1 78 70.5
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 2.6e-21 105.1 77 67.5
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 3.3e-21 104.8 101 54.5
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 5.7e-21 104.0 66 75.8
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 7.5e-21 103.6 69 72.5
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 7.5e-21 103.6 69 72.5
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 7.5e-21 103.6 61 82.0
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 2.2e-20 102.1 61 80.3
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 4.8e-20 100.9 69 66.7
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 1.4e-19 99.4 98 54.1
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 3.1e-19 98.2 68 70.6
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.1e-19 98.2 75 66.7
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 5.3e-19 97.4 68 66.2
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 7.0e-19 97.1 67 70.1
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 9.1e-19 96.7 67 71.6
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 5.9e-18 94.0 78 60.3
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.1e-16 89.7 77 59.7
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.5e-16 89.4 52 82.7
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 3.2e-16 88.2 58 75.9
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 3.2e-16 88.2 60 68.3
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 3.2e-16 88.2 60 71.7
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.2e-15 86.3 61 67.2
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 3.6e-15 84.7 55 72.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 4.7e-15 84.3 52 76.9
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 6.1e-15 84.0 55 76.4
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 1.4e-14 82.8 52 75.0
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.6e-13 78.6 71 56.3
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 3.4e-13 78.2 67 58.2
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 7.5e-13 77.0 65 58.5
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.3e-12 76.3 57 68.4
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 2.8e-12 75.1 69 52.2
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 4.8e-12 74.3 67 59.7
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.2e-10 69.7 69 53.6
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 7.7e-10 67.0 52 65.4
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 7.2e-08 60.5 48 66.7
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.2e-07 59.7 54 51.9
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 3.6e-07 58.2 38 71.1
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 4.0e-06 54.7 34 79.4


User provided reference genes

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