Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002788g0030 Nicotiana tabacum HOM05D007782 ORTHO05D009833 1.7e-31 138.7 68 100.0
Peaxi162Scf00117g01316 Petunia axillaris HOM05D007782 ORTHO05D009833 2.3e-20 101.7 70 72.9
PGSC0003DMG400004987 Solanum tuberosum HOM05D007782 ORTHO05D009833 8.8e-20 99.8 70 68.6
Solyc12g056090.2 Solanum lycopersicum HOM05D007782 ORTHO05D009833 2.0e-19 98.6 70 67.1
Sopen12g028600 Solanum pennellii HOM05D007782 ORTHO05D009833 2.6e-19 98.2 70 67.1
CAN.G2065.2 Capsicum annuum HOM05D007782 ORTHO05D009833 4.8e-18 94.0 71 64.8
CAN.G98.14 Capsicum annuum HOM05D007782 ORTHO05D009833 2.2e-15 85.1 68 60.3
Cc08_g15700 Coffea canephora HOM05D007782 ORTHO05D009833 5.5e-14 80.5 68 55.9
Eucgr.E00835 Eucalyptus grandis HOM05D007782 ORTHO05D009833 2.1e-13 78.6 60 63.3
Cfa012852 Carpinus fangiana HOM05D007782 ORTHO05D009833 3.6e-13 77.8 51 66.7
CiPaw.12G085400 Carya illinoinensis HOM05D007782 ORTHO05D009833 3.6e-13 77.8 51 68.6
Haze_08681 Corylus avellana HOM05D007782 ORTHO05D009833 3.6e-13 77.8 51 66.7
ClCG01G002060 Citrullus lanatus HOM05D007782 ORTHO05D009833 4.7e-13 77.4 54 68.5
CsaV3_5G002190 Cucumis sativus L. HOM05D007782 ORTHO05D009833 6.1e-13 77.0 54 68.5
MELO3C005735.2 Cucumis melo HOM05D007782 ORTHO05D009833 1.4e-12 75.9 54 66.7
Thecc.03G292200 Theobroma cacao HOM05D007782 ORTHO05D009833 2.3e-12 75.1 64 54.7
Sed0001446 Sechium edule HOM05D007782 ORTHO05D009833 3.0e-12 74.7 47 70.2
vmacro11447 Vaccinium macrocarpon HOM05D007782 ORTHO05D009833 4.0e-12 74.3 65 52.3
Manes.01G046100 Manihot esculenta HOM05D007782 ORTHO05D009833 5.2e-12 73.9 47 68.1
Potri.003G136500 Populus trichocarpa HOM05D007782 ORTHO05D009833 5.2e-12 73.9 52 59.6
Prupe.5G114300 Prunus persica HOM05D007782 ORTHO05D009833 5.2e-12 73.9 52 63.5
TAR636G2384 Trochodendron aralioides HOM05D007782 ORTHO05D009833 5.2e-12 73.9 48 68.8
Aqoxy7G00161 Aquilegia oxysepala HOM05D007782 ORTHO05D009833 6.8e-12 73.6 46 71.7
Dinv37557 Davidia involucrata HOM05D007782 ORTHO05D009833 6.8e-12 73.6 62 56.5
Sabra03G0098200 Salix brachista HOM05D007782 ORTHO05D009833 6.8e-12 73.6 52 59.6
QL02p031553 Quercus lobata HOM05D007782 ORTHO05D009833 8.8e-12 73.2 47 66.0
Actinidia27340 Actinidia chinensis HOM05D007782 ORTHO05D009833 1.2e-11 72.8 47 70.2
Nn1g01795 Nelumbo nucifera HOM05D007782 ORTHO05D009833 2.6e-11 71.6 52 67.3
MD06G1100800 Malus domestica HOM05D007782 ORTHO05D009833 3.4e-11 71.2 52 59.6
RcHm_v2.0_Chr7g0195561 Rosa chinensis HOM05D007782 ORTHO05D009833 3.4e-11 71.2 52 59.6
SalBow8G2543 Salvia bowleyana HOM05D007782 ORTHO05D009833 3.4e-11 71.2 64 48.4
BcaNung05927 Brassica carinata HOM05D007782 ORTHO05D009833 4.4e-11 70.9 47 66.0
Lalb_Chr09g0332651 Lupinus albus HOM05D007782 ORTHO05D009833 4.4e-11 70.9 58 56.9
THA.LOC104814903 Tarenaya hassleriana HOM05D007782 ORTHO05D009833 4.4e-11 70.9 45 66.7
Hund14240 Selenicereus undatus HOM05D007782 ORTHO05D009833 5.7e-11 70.5 48 62.5
Thhalv10026535m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 7.5e-11 70.1 45 66.7
FAN04G1669 Fragaria x ananassa HOM05D007782 ORTHO05D009833 7.5e-11 70.1 46 65.2
FAN08G0568 Fragaria x ananassa HOM05D007782 ORTHO05D009833 7.5e-11 70.1 46 65.2
DCAR_027723 Daucus carota HOM05D007782 ORTHO05D009833 9.8e-11 69.7 58 55.2
Sp7g21730 Schrenkiella parvula HOM05D007782 ORTHO05D009833 9.8e-11 69.7 61 52.5
Lalb_Chr05g0224281 Lupinus albus HOM05D007782 ORTHO05D009833 1.7e-10 68.9 58 55.2
Aa31LG6G7000 Aethionema arabicum HOM05D007782 ORTHO05D009833 2.8e-10 68.2 43 67.4
arahy.Tifrunner.gnm1.ann1.WVD97E Arachis hypogaea HOM05D007782 ORTHO05D009833 2.8e-10 68.2 48 64.6
Ca_17498_v3 Cicer arietinum L. HOM05D007782 ORTHO05D009833 2.8e-10 68.2 51 58.8
Ciclev10023213m.g Citrus clementina HOM05D007782 ORTHO05D009833 2.8e-10 68.2 50 58.0
Lsat_1_v5_gn_6_11880 Lactuca sativa HOM05D007782 ORTHO05D009833 2.8e-10 68.2 61 54.1
CARHR231160 Cardamine hirsuta HOM05D007782 ORTHO05D009833 3.7e-10 67.8 46 60.9
PSO135G0862 Papaver somniferum HOM05D007782 ORTHO05D009833 3.7e-10 67.8 47 66.0
AT4G23760 Arabidopsis thaliana HOM05D007782 ORTHO05D009833 4.8e-10 67.4 43 65.1
C07p53110 Brassica napus HOM05D007782 ORTHO05D009833 4.8e-10 67.4 45 64.4
BolC7t45807H Brassica oleracea HOM05D007782 ORTHO05D009833 4.8e-10 67.4 45 64.4
Migut.E01229 Erythranthe guttata HOM05D007782 ORTHO05D009833 4.8e-10 67.4 62 46.8
HanXRQChr07g0191091 Helianthus annuus HOM05D007782 ORTHO05D009833 4.8e-10 67.4 47 63.8
COL.COLO4_21276 Corchorus olitorius HOM05D007782 ORTHO05D009833 6.3e-10 67.0 51 58.8
Thhalv10029109m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 6.3e-10 67.0 56 48.2
Phvul.002G295900 Phaseolus vulgaris HOM05D007782 ORTHO05D009833 6.3e-10 67.0 64 50.0
Sp6g06300 Schrenkiella parvula HOM05D007782 ORTHO05D009833 6.3e-10 67.0 43 62.8
Atru.chr9.2057 Acer truncatum HOM05D007782 ORTHO05D009833 8.3e-10 66.6 51 56.9
arahy.Tifrunner.gnm1.ann1.UB6WN3 Arachis hypogaea HOM05D007782 ORTHO05D009833 8.3e-10 66.6 45 66.7
A03p54750 Brassica napus HOM05D007782 ORTHO05D009833 8.3e-10 66.6 45 62.2
BraA03t14542Z Brassica rapa HOM05D007782 ORTHO05D009833 8.3e-10 66.6 45 62.2
Psat7g027800 Pisum sativum HOM05D007782 ORTHO05D009833 1.1e-09 66.2 47 68.1
unitig_61.g26273 Utricularia gibba HOM05D007782 ORTHO05D009833 1.1e-09 66.2 56 53.6
CDE10G0746 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 1.8e-09 65.5 46 63.0
CDE10G0352 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 2.4e-09 65.1 46 63.0
GSVIVG01019488001 Vitis vinifera HOM05D007782 ORTHO05D009833 2.4e-09 65.1 46 60.9
Lj4g0009467 Lotus japonicus HOM05D007782 ORTHO05D009833 4.1e-09 64.3 49 59.2
AL7G29590 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 5.4e-09 63.9 43 62.8
TPR.G3446 Trifolium pratense HOM05D007782 ORTHO05D009833 5.4e-09 63.9 52 57.7
Os01g0224300 Oryza sativa ssp. japonica HOM05D007782 ORTHO05D009833 9.1e-09 63.2 58 50.0
Glyma.08G021000 Glycine max HOM05D007782 ORTHO05D009833 1.6e-08 62.4 51 54.9
Carub.0007s1735 Capsella rubella HOM05D007782 ORTHO05D009833 3.5e-08 61.2 43 60.5
Glyma.05G214700 Glycine max HOM05D007782 ORTHO05D009833 3.5e-08 61.2 51 54.9
CARHR255470 Cardamine hirsuta HOM05D007782 ORTHO05D009833 4.5e-08 60.8 43 58.1
AL6G45280 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 5.9e-08 60.5 43 58.1
BcaNung03194 Brassica carinata HOM05D007782 ORTHO05D009833 1.3e-07 59.3 38 68.4
MBI06_g22402_MAGBIO Magnolia biondii HOM05D007782 ORTHO05D009833 1.3e-07 59.3 50 58.0
TWI81G1055 Tripterygium wilfordii HOM05D007782 ORTHO05D009833 2.3e-07 58.5 52 51.9
FAN18G3918 Fragaria x ananassa HOM05D007782 ORTHO05D009833 2.9e-07 58.2 37 64.9
Medtr8g099240 Medicago truncatula HOM05D007782 ORTHO05D009833 3.8e-07 57.8 44 59.1
Rhsim02G0240700 Rhododendron simsii HOM05D007782 ORTHO05D009833 6.6e-07 57.0 38 65.8
ATR1093G039 Amborella trichopoda HOM05D007782 ORTHO05D009833 1.9e-06 55.5 46 47.8
Duzib084G1198 Durio zibethinus HOM05D007782 ORTHO05D009833 2.5e-06 55.1 45 53.3
AagrBONN_evm.TU.Sc2ySwM_362.1714 Anthoceros agrestis HOM05D007782 ORTHO05D009833 7.2e-06 53.5 49 44.9


User provided reference genes

Program Settings