Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002786g0120 Nicotiana tabacum HOM05D000071 ORTHO05D000029 7.1e-132 474.2 282 100.0
PGSC0003DMG400019072 Solanum tuberosum HOM05D000071 ORTHO05D000029 4.0e-26 122.9 142 54.2
PGSC0003DMG400014753 Solanum tuberosum HOM05D000071 ORTHO05D000029 9.0e-26 121.7 140 54.3
PGSC0003DMG400014739 Solanum tuberosum HOM05D000071 ORTHO05D000029 2.6e-25 120.2 142 53.5
PGSC0003DMG400019071 Solanum tuberosum HOM05D000071 ORTHO05D000029 1.3e-24 117.9 140 53.6
Nitab4.5_0004261g0060 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.7e-24 117.5 130 51.5
Nitab4.5_0010781g0010 Nicotiana tabacum HOM05D000071 ORTHO05D000029 2.2e-24 117.1 128 53.1
Peaxi162Scf01090g00121 Petunia axillaris HOM05D000071 ORTHO05D000029 7.9e-22 108.6 138 47.1
PGSC0003DMG400014736 Solanum tuberosum HOM05D000071 ORTHO05D000029 9.6e-20 101.7 127 51.2
Peaxi162Scf00199g00052 Petunia axillaris HOM05D000071 ORTHO05D000029 6.2e-19 99.0 126 44.4
Nitab4.5_0002914g0140 Nicotiana tabacum HOM05D000071 ORTHO05D000029 8.1e-19 98.6 110 53.6
Nitab4.5_0004261g0030 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.1e-18 96.7 111 53.2
CAN.G149.3 Capsicum annuum HOM05D000071 ORTHO05D000029 1.2e-14 84.7 129 41.9
Peaxi162Scf01090g00004 Petunia axillaris HOM05D000071 ORTHO05D000029 1.6e-14 84.3 105 48.6
CSS0031280 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.7e-14 83.6 115 46.1
CSS0005861 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 3.5e-14 83.2 115 46.1
Nitab4.5_0006246g0010 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.5e-14 83.2 130 40.0
Peaxi162Scf01090g10011 Petunia axillaris HOM05D000071 ORTHO05D000029 3.5e-14 83.2 140 40.7
Nitab4.5_0000443g0080 Nicotiana tabacum HOM05D000071 ORTHO05D000029 6.0e-14 82.4 130 40.0
Nitab4.5_0009002g0030 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.3e-13 81.3 76 59.2
CSS0040382 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 8.7e-13 78.6 114 43.9
CANSAT21G1465 Cannabis sativa HOM05D000071 ORTHO05D000029 3.7e-11 73.2 110 40.9
FAN06G0683 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.8e-10 70.9 115 37.4
FAN06G1668 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.8e-10 70.9 115 37.4
TAR374G1085 Trochodendron aralioides HOM05D000071 ORTHO05D000029 4.1e-10 69.7 113 38.9
TAR636G2807 Trochodendron aralioides HOM05D000071 ORTHO05D000029 5.3e-10 69.3 103 40.8
CSS0035471 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 6.9e-10 68.9 115 34.8
Dinv07788 Davidia involucrata HOM05D000071 ORTHO05D000029 6.9e-10 68.9 122 36.9
HanXRQChr03g0066231 Helianthus annuus HOM05D000071 ORTHO05D000029 6.9e-10 68.9 120 38.3
Thecc.03G148000 Theobroma cacao HOM05D000071 ORTHO05D000029 1.2e-09 68.2 111 39.6
CSS0040636 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.5e-09 67.8 115 34.8
COL.COLO4_09596 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.5e-09 67.8 115 40.0
ECA233G4165 Erigeron canadensis HOM05D000071 ORTHO05D000029 5.9e-09 65.9 133 30.1
QL09p014463 Quercus lobata HOM05D000071 ORTHO05D000029 5.9e-09 65.9 129 36.4
COL.COLO4_37333 Corchorus olitorius HOM05D000071 ORTHO05D000029 7.6e-09 65.5 112 40.2
Dinv35184 Davidia involucrata HOM05D000071 ORTHO05D000029 7.6e-09 65.5 111 37.8
Dinv35239 Davidia involucrata HOM05D000071 ORTHO05D000029 7.6e-09 65.5 121 34.7
MD01G1172100 Malus domestica HOM05D000071 ORTHO05D000029 7.6e-09 65.5 109 40.4
CSS0003259 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.0e-08 65.1 103 36.9
Medtr4g011310 Medicago truncatula HOM05D000071 ORTHO05D000029 1.0e-08 65.1 139 36.0
Prupe.2G270200 Prunus persica HOM05D000071 ORTHO05D000029 1.0e-08 65.1 109 39.4
QL02p063073 Quercus lobata HOM05D000071 ORTHO05D000029 2.9e-08 63.5 111 38.7
TWI39G1075 Tripterygium wilfordii HOM05D000071 ORTHO05D000029 2.9e-08 63.5 102 40.2
CANSAT80G2471 Cannabis sativa HOM05D000071 ORTHO05D000029 3.8e-08 63.2 115 38.3
Cc00_g05030 Coffea canephora HOM05D000071 ORTHO05D000029 3.8e-08 63.2 128 34.4
Ciclev10007341m.g Citrus clementina HOM05D000071 ORTHO05D000029 5.0e-08 62.8 120 38.3
ECA238G0893 Erigeron canadensis HOM05D000071 ORTHO05D000029 6.5e-08 62.4 234 27.8
QL05p023568 Quercus lobata HOM05D000071 ORTHO05D000029 6.5e-08 62.4 113 37.2
FAN11G1490 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.1e-07 61.6 105 34.3
Manes.07G042900 Manihot esculenta HOM05D000071 ORTHO05D000029 1.1e-07 61.6 125 34.4
ECA238G0017 Erigeron canadensis HOM05D000071 ORTHO05D003088 1.4e-07 61.2 122 35.2
Nitab4.5_0013750g0020 Nicotiana tabacum HOM05D000071 ORTHO05D000029 1.4e-07 61.2 148 34.5
VMungo1383G2928 Vigna mungo HOM05D000071 ORTHO05D000029 1.4e-07 61.2 111 35.1
PGSC0003DMG400014740 Solanum tuberosum HOM05D000071 ORTHO05D000029 1.9e-07 60.8 121 37.2
QL09p052225 Quercus lobata HOM05D000071 ORTHO05D000029 2.5e-07 60.5 135 35.6
TPR.G13545 Trifolium pratense HOM05D000071 ORTHO05D000029 2.5e-07 60.5 116 37.1
VMungo0647G0722 Vigna mungo HOM05D000071 ORTHO05D000029 2.5e-07 60.5 113 34.5
Nitab4.5_0000023g0570 Nicotiana tabacum HOM05D000071 ORTHO05D000029 3.2e-07 60.1 215 31.2
HanXRQChr12g0370831 Helianthus annuus HOM05D000071 ORTHO05D000029 4.2e-07 59.7 125 37.6
Glyma.09G272100 Glycine max HOM05D000071 ORTHO05D000029 5.5e-07 59.3 113 31.9
Glyma.09G272101 Glycine max HOM05D000071 ORTHO05D000029 5.5e-07 59.3 113 31.9
Medtr3g452750 Medicago truncatula HOM05D000071 ORTHO05D000029 5.5e-07 59.3 118 37.3
QL05p024177 Quercus lobata HOM05D000071 ORTHO05D000029 5.5e-07 59.3 120 35.8
Ciclev10007379m.g Citrus clementina HOM05D000071 ORTHO05D000029 7.2e-07 58.9 66 48.5
Ciclev10010776m.g Citrus clementina HOM05D000071 ORTHO05D000029 7.2e-07 58.9 66 48.5
ECA233G2812 Erigeron canadensis HOM05D000013 ORTHO05D000011 7.2e-07 58.9 132 37.1
Eucgr.B03475 Eucalyptus grandis HOM05D000071 ORTHO05D000029 7.2e-07 58.9 112 39.3
Glyma.16G186100 Glycine max HOM05D000071 ORTHO05D000029 9.3e-07 58.5 114 38.6
Lalb_Chr18g0053831 Lupinus albus HOM05D000071 ORTHO05D000029 9.3e-07 58.5 113 38.9
Dinv07783 Davidia involucrata HOM05D000071 ORTHO05D000029 1.2e-06 58.2 109 37.6
HanXRQChr04g0099731 Helianthus annuus HOM05D000071 ORTHO05D000029 1.2e-06 58.2 120 34.2
HanXRQChr07g0205661 Helianthus annuus HOM05D000071 ORTHO05D000029 1.2e-06 58.2 147 33.3
MBI17_g33050_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 1.2e-06 58.2 124 35.5
QL03p008495 Quercus lobata HOM05D000071 ORTHO05D000029 1.2e-06 58.2 113 36.3
TPR.G16573 Trifolium pratense HOM05D000071 ORTHO05D000029 1.2e-06 58.2 120 35.8
VMungo0647G1133 Vigna mungo HOM05D000071 ORTHO05D000029 1.2e-06 58.2 115 39.1
CSS0039606 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 1.6e-06 57.8 103 34.0
Glyma.13G003500 Glycine max HOM05D000071 ORTHO05D000029 1.6e-06 57.8 114 33.3
HanXRQChr04g0099761 Helianthus annuus HOM05D000071 ORTHO05D000029 1.6e-06 57.8 135 34.1
HanXRQChr14g0461061 Helianthus annuus HOM05D000071 ORTHO05D000029 1.6e-06 57.8 115 35.7
Rhsim10G0010700 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.6e-06 57.8 105 35.2
Ciclev10030038m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.1e-06 57.4 120 32.5
Dinv07779 Davidia involucrata HOM05D000071 ORTHO05D000029 2.1e-06 57.4 105 39.0
Dinv32122 Davidia involucrata HOM05D000071 ORTHO05D000029 2.1e-06 57.4 125 35.2
ECA238G0112 Erigeron canadensis HOM05D000071 ORTHO05D000029 2.1e-06 57.4 236 25.0
HanXRQChr04g0099431 Helianthus annuus HOM05D000071 ORTHO05D000029 2.1e-06 57.4 136 30.9
Lj6g0011395 Lotus japonicus HOM05D000071 ORTHO05D000029 2.1e-06 57.4 113 33.6
Lj6g0026668 Lotus japonicus HOM05D000071 ORTHO05D000029 2.1e-06 57.4 113 33.6
Lj6g0027536 Lotus japonicus HOM05D000071 ORTHO05D000029 2.1e-06 57.4 113 33.6
Phvul.001G042800 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 2.1e-06 57.4 113 32.7
Cc04_g08800 Coffea canephora HOM05D000071 ORTHO05D000029 2.7e-06 57.0 100 36.0
HanXRQChr14g0426761 Helianthus annuus HOM05D000071 ORTHO05D000029 2.7e-06 57.0 144 31.2
QL05p023479 Quercus lobata HOM05D000071 ORTHO05D000029 2.7e-06 57.0 138 34.8
QL05p023971 Quercus lobata HOM05D000071 ORTHO05D000029 2.7e-06 57.0 110 36.4
VMungo0464G1277 Vigna mungo HOM05D000071 ORTHO05D000029 2.7e-06 57.0 131 35.9
Duzib114G0006 Durio zibethinus HOM05D000071 ORTHO05D000029 3.5e-06 56.6 81 43.2
Glyma.15G088400 Glycine max HOM05D000071 ORTHO05D000029 3.5e-06 56.6 102 36.3
Glyma.16G191800 Glycine max HOM05D000071 ORTHO05D000029 3.5e-06 56.6 114 36.8
VMungo0647G1606 Vigna mungo HOM05D000071 ORTHO05D000029 3.5e-06 56.6 113 33.6
Medtr2g017420 Medicago truncatula HOM05D000071 ORTHO05D000029 4.6e-06 56.2 115 35.7
Nitab4.5_0000173g0070 Nicotiana tabacum HOM05D000071 ORTHO05D000029 4.6e-06 56.2 134 35.8
Rhsim03G0157300 Rhododendron simsii HOM05D000071 ORTHO05D000029 4.6e-06 56.2 105 37.1
VMungo0647G2097 Vigna mungo HOM05D000071 ORTHO05D000029 4.6e-06 56.2 113 36.3
Atru.chr2.3395 Acer truncatum HOM05D000071 ORTHO05D000029 6.1e-06 55.8 113 36.3
Glyma.16G191500 Glycine max HOM05D000071 ORTHO05D000029 6.1e-06 55.8 131 34.4
HanXRQChr14g0426821 Helianthus annuus HOM05D000071 ORTHO05D000029 6.1e-06 55.8 218 25.7
HanXRQChr14g0426831 Helianthus annuus HOM05D000071 ORTHO05D000029 6.1e-06 55.8 218 25.7
Rhsim02G0186100 Rhododendron simsii HOM05D000071 ORTHO05D000029 6.1e-06 55.8 101 36.6
Rhsim03G0158600 Rhododendron simsii HOM05D000071 ORTHO05D000029 6.1e-06 55.8 105 36.2
TPR.G4484 Trifolium pratense HOM05D000071 ORTHO05D000029 6.1e-06 55.8 75 46.7
Dinv34738 Davidia involucrata HOM05D000071 ORTHO05D000029 7.9e-06 55.5 91 41.8
Gorai.003G112100 Gossypium raimondii HOM05D000071 ORTHO05D000029 7.9e-06 55.5 108 36.1
HanXRQChr07g0205191 Helianthus annuus HOM05D000071 ORTHO05D000029 7.9e-06 55.5 116 33.6
TPR.G29942 Trifolium pratense HOM05D000071 ORTHO05D000029 7.9e-06 55.5 116 33.6


User provided reference genes

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