Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 2.8e-137 491.9 238 100.0
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 5.5e-125 451.1 238 92.0
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 7.2e-101 370.9 238 77.7
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 2.1e-84 316.2 238 67.6
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 2.9e-78 295.8 240 64.2
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 4.7e-68 261.9 234 63.2
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 1.2e-66 257.3 234 62.8
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 2.7e-47 193.0 244 45.9
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 3.1e-43 179.5 198 50.5
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 1.9e-40 170.2 192 47.4
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 5.4e-40 168.7 206 45.6
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 3.5e-39 166.0 191 47.6
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 2.3e-38 163.3 194 50.0
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 5.1e-38 162.2 200 48.0
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 1.1e-37 161.0 246 41.5
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 5.6e-37 158.7 247 40.9
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 7.3e-37 158.3 220 42.7
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 1.6e-36 157.1 217 44.2
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 1.1e-35 154.5 189 46.6
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 1.1e-35 154.5 189 46.6
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.4e-35 154.1 190 47.9
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 1.8e-35 153.7 201 45.8
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 3.1e-35 152.9 242 40.1
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 8.9e-35 151.4 191 47.1
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 1.2e-34 151.0 191 45.0
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 9.9e-34 147.9 199 45.7
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.3e-33 147.5 191 45.5
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 4.9e-33 145.6 193 44.0
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 6.4e-33 145.2 198 44.9
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 8.4e-33 144.8 198 42.9
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 2.4e-32 143.3 194 44.3
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.2e-32 142.5 196 42.3
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 5.4e-32 142.1 225 39.1
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 9.2e-32 141.4 190 41.1
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 9.2e-32 141.4 234 37.6
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.6e-31 140.6 196 42.9
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 2.1e-31 140.2 196 42.9
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.7e-30 137.1 224 40.2
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 1.7e-30 137.1 197 43.7
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 6.6e-30 135.2 198 39.9
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 6.6e-30 135.2 199 43.2
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 6.6e-30 135.2 211 41.2
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 1.1e-29 134.4 198 39.4
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 1.5e-29 134.0 199 41.2
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 1.9e-29 133.7 214 39.3
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 2.5e-29 133.3 203 39.4
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 4.3e-29 132.5 197 42.1
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 9.6e-29 131.3 196 43.9
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.1e-28 130.2 196 43.4
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 4.7e-28 129.0 204 40.2
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 6.2e-28 128.6 250 38.8
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 8.1e-28 128.3 191 40.3
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 1.4e-27 127.5 200 42.5
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 4.0e-27 125.9 196 40.3
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 4.0e-27 125.9 196 40.3
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 2.0e-26 123.6 203 39.9
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 3.4e-26 122.9 256 35.2
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 4.4e-26 122.5 214 38.8
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 5.8e-26 122.1 249 35.3
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 7.6e-26 121.7 197 42.6
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 3.5e-23 112.8 206 35.4
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 3.5e-23 112.8 176 37.5
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 4.6e-23 112.5 218 39.9
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.0e-22 111.3 151 41.7
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 1.3e-22 110.9 200 39.5
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 1.7e-22 110.5 200 39.5
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 3.0e-22 109.8 201 39.8
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 3.0e-22 109.8 220 35.5
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 5.1e-22 109.0 191 39.8
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 5.1e-22 109.0 174 37.4
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 2.5e-21 106.7 242 30.6
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 1.3e-20 104.4 202 37.6
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 1.8e-19 100.5 151 41.1
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 9.0e-19 98.2 143 42.7
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 1.5e-18 97.4 211 36.5
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 2.6e-18 96.7 190 34.2
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 3.4e-18 96.3 179 39.1
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 4.5e-18 95.9 128 42.2
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.3e-17 94.4 136 41.9
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 2.9e-17 93.2 138 42.0
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 4.9e-17 92.4 146 40.4
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 4.2e-16 89.4 141 39.0
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 1.2e-15 87.8 203 31.5
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.6e-15 87.4 143 39.2
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 3.0e-14 83.2 129 42.6
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 9.6e-13 78.2 276 29.3
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.6e-12 77.4 117 41.9
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 3.7e-12 76.3 208 33.2
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 8.1e-12 75.1 143 35.0
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 2.4e-11 73.6 150 34.7
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 6.9e-11 72.0 141 31.9
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.2e-10 71.2 141 32.6
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 2.0e-10 70.5 144 34.7
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 3.4e-10 69.7 139 36.7
Medtr4g079340 Medicago truncatula HOM05D007287 ORTHO05D008965 1.0e-09 68.2 47 59.6
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 2.9e-09 66.6 211 33.2
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 2.9e-09 66.6 240 27.1
Psat2g191120 Pisum sativum HOM05D007287 ORTHO05D008965 4.9e-09 65.9 189 30.7
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 3.2e-08 63.2 97 34.0
DCAR_011429 Daucus carota HOM05D054201 ORTHO05D008965 5.5e-08 62.4 156 30.8
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.6e-07 60.8 96 36.5
DCAR_010225 Daucus carota HOM05D054201 ORTHO05D008965 2.7e-07 60.1 154 31.2
Ca_18906_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 6.0e-07 58.9 172 30.8
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 1.0e-06 58.2 130 33.1
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 1.3e-06 57.8 81 40.7
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.3e-06 57.8 139 31.7


User provided reference genes

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