Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002782g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.5e-145 518.5 297 100.0
Nitab4.5_0005746g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-81 306.6 287 72.5
Nitab4.5_0000707g0210 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.9e-75 285.4 167 80.8
Nitab4.5_0008386g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-74 283.9 241 74.3
Nitab4.5_0001781g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.3e-71 272.7 252 69.4
Nitab4.5_0000843g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-70 270.4 211 65.4
Nitab4.5_0001861g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.4e-69 266.5 264 66.3
Nitab4.5_0000095g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.9e-61 238.4 126 86.5
Nitab4.5_0004443g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-60 236.5 163 71.8
Nitab4.5_0000540g0130 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.4e-60 236.1 239 69.9
Nitab4.5_0000082g0390 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.0e-59 234.6 149 73.8
Nitab4.5_0000092g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-57 227.3 183 63.9
Nitab4.5_0004465g0090 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.9e-56 222.6 213 56.8
Nitab4.5_0001488g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-55 219.9 198 75.8
Nitab4.5_0011951g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-52 209.9 123 79.7
Nitab4.5_0001432g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.7e-52 208.4 147 69.4
Nitab4.5_0001246g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.9e-51 206.5 172 54.1
Nitab4.5_0003657g0010 Nicotiana tabacum HOM05D000045 ORTHO05D002701 7.2e-50 201.8 182 50.0
Nitab4.5_0012491g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.0e-48 196.4 193 49.2
Nitab4.5_0001727g0180 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.9e-48 196.1 170 52.4
Nitab4.5_0002352g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.8e-48 194.9 172 51.7
Nitab4.5_0001031g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.4e-45 187.6 105 81.9
Nitab4.5_0002714g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-45 187.6 172 51.2
Nitab4.5_0008760g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-45 187.6 200 47.0
Nitab4.5_0003463g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-45 186.4 103 81.6
Nitab4.5_0002386g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-41 174.5 134 66.4
Nitab4.5_0002791g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-41 173.3 180 67.8
Nitab4.5_0001021g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-39 167.5 195 45.1
Nitab4.5_0001969g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.4e-39 166.4 172 46.5
Nitab4.5_0006902g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-38 164.5 183 62.8
Nitab4.5_0000025g0250 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.1e-37 159.5 89 84.3
Nitab4.5_0006220g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.5e-36 156.4 215 40.0
Nitab4.5_0001106g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.0e-35 152.5 137 81.8
Nitab4.5_0000260g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.2e-34 149.4 185 43.2
Nitab4.5_0004578g0040 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.7e-33 146.0 202 40.1
Nitab4.5_0002906g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-32 143.7 169 43.8
Nitab4.5_0000691g0160 Nicotiana tabacum HOM05D000045 ORTHO05D002701 8.8e-32 141.7 193 40.9
Nitab4.5_0002302g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.8e-30 136.0 123 49.6
Nitab4.5_0001168g0180 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.3e-30 135.6 194 37.1
Nitab4.5_0002211g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.3e-30 135.2 112 53.6
Nitab4.5_0002309g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.1e-29 132.9 180 38.3
CAN.G739.5 Capsicum annuum HOM05D004033 ORTHO05D002701 5.4e-29 132.5 188 35.1
CAN.G160.46 Capsicum annuum HOM05D004033 ORTHO05D002701 7.0e-29 132.1 171 36.3
Nitab4.5_0000987g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.1e-29 131.7 160 41.2
Nitab4.5_0003881g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.7e-27 127.5 111 50.5
Nitab4.5_0002449g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-27 127.1 183 41.0
CAN.G908.1 Capsicum annuum HOM05D004033 ORTHO05D002701 3.3e-26 123.2 187 32.1
Nitab4.5_0000583g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.8e-24 115.5 148 77.0
Nitab4.5_0000043g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.0e-23 114.0 102 51.0
Nitab4.5_0006574g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.4e-23 112.8 93 61.3
Nitab4.5_0002145g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.7e-23 112.5 168 69.0
Nitab4.5_0002753g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.8e-23 111.7 71 80.3
Nitab4.5_0004219g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.7e-22 110.9 178 36.5
Nitab4.5_0003611g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.3e-22 109.0 69 71.0
Nitab4.5_0005934g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-21 108.2 62 75.8
Nitab4.5_0008768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.8e-21 107.5 151 37.7
Nitab4.5_0001310g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.4e-21 107.1 79 65.8
Migut.M00234 Erythranthe guttata HOM05D000045 ORTHO05D000067 5.4e-21 105.9 211 28.9
Nitab4.5_0000307g0220 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.2e-21 105.1 156 35.9
Nitab4.5_0007742g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-20 104.4 196 35.7
Nitab4.5_0000188g0300 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-19 101.7 137 67.2
Nitab4.5_0012426g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.3e-19 101.3 71 69.0
Nitab4.5_0006902g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.9e-19 100.1 54 79.6
Nitab4.5_0009727g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-18 97.1 130 37.7
Manes.09G081652 Manihot esculenta HOM05D000045 ORTHO05D000067 8.0e-17 92.0 178 29.8
Nitab4.5_0006745g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.0e-17 92.0 138 66.7
Nitab4.5_0000127g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.8e-16 90.9 56 71.4
Nitab4.5_0003145g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.2e-16 89.4 228 45.6
Nitab4.5_0006745g0070 Nicotiana tabacum HOM05D000045 ORTHO05D002701 8.9e-16 88.6 52 75.0
Nitab4.5_0005287g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-15 87.8 112 38.4
Nitab4.5_0003463g0110 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.0e-15 87.4 128 78.1
Nitab4.5_0002145g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-15 85.5 50 78.0
Nitab4.5_0001106g0040 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.2e-14 84.0 55 72.7
Migut.A01062 Erythranthe guttata HOM05D000045 ORTHO05D000067 2.4e-13 80.5 150 31.3
Nitab4.5_0000082g0380 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.2e-13 78.6 138 67.4
Nitab4.5_0004232g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.5e-12 76.6 62 53.2
Nitab4.5_0013768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-11 75.1 145 40.0
Nitab4.5_0000108g0420 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-11 74.7 160 31.2
Nitab4.5_0000188g0290 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.3e-11 73.9 42 76.2
Peaxi162Scf01373g00003 Petunia axillaris HOM05D000045 ORTHO05D002701 3.3e-10 70.1 139 28.8
Peaxi162Scf03947g00009 Petunia axillaris HOM05D000045 ORTHO05D002701 3.3e-10 70.1 139 28.8
Nitab4.5_0011485g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.3e-10 69.7 158 31.0
Peaxi162Scf01954g00002 Petunia axillaris HOM05D000045 ORTHO05D002701 5.6e-10 69.3 140 27.9
PSO135G0126 Papaver somniferum HOM05D000045 ORTHO05D000067 6.2e-09 65.9 191 24.1
PSO478G2006 Papaver somniferum HOM05D000045 ORTHO05D009940 6.2e-09 65.9 191 24.1
CAN.G1662.1 Capsicum annuum HOM05D004033 ORTHO05D002701 1.4e-08 64.7 79 36.7
Nitab4.5_0006031g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-08 64.7 87 73.6
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 1.8e-08 64.3 153 26.1
Nitab4.5_0003351g0130 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.3e-08 63.9 58 48.3
TPR.G4145 Trifolium pratense HOM05D000045 ORTHO05D000067 2.3e-08 63.9 101 26.7
EL10Ac6g15718 Beta vulgaris HOM05D000045 ORTHO05D000067 4.0e-08 63.2 95 26.3
CAN.G320.1 Capsicum annuum HOM05D004033 ORTHO05D002701 4.0e-08 63.2 66 42.4
Psat4g115040 Pisum sativum HOM05D000045 ORTHO05D009940 4.0e-08 63.2 129 24.8
Psat7g141800 Pisum sativum HOM05D000045 ORTHO05D009940 4.0e-08 63.2 129 24.8
EL10Ac3g05736 Beta vulgaris HOM05D000045 ORTHO05D000067 5.2e-08 62.8 95 26.3
Nitab4.5_0002753g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.2e-08 62.8 37 83.8
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 5.2e-08 62.8 111 33.3
Psat5g199520 Pisum sativum HOM05D000045 ORTHO05D009940 5.2e-08 62.8 129 24.8
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 5.2e-08 62.8 114 27.2
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 6.8e-08 62.4 78 39.7
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.9e-08 62.0 207 23.2
TWI34G1161 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-07 61.6 101 31.7
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-07 61.2 207 22.7
Nitab4.5_0024535g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-07 61.2 31 80.6
TWI34G1375 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.5e-07 61.2 142 25.4
PSO675G3853 Papaver somniferum HOM05D000045 ORTHO05D000067 2.0e-07 60.8 136 26.5
Prupe.7G161400 Prunus persica HOM05D000045 ORTHO05D000067 2.0e-07 60.8 94 30.9
PGR044G2471 Punica granatum HOM05D000045 ORTHO05D000067 2.0e-07 60.8 115 27.8
TPR.G28629 Trifolium pratense HOM05D000045 ORTHO05D000067 2.0e-07 60.8 129 25.6
TWI73G0124 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-07 60.8 100 32.0
PSO210G5073 Papaver somniferum HOM05D000045 ORTHO05D009940 2.6e-07 60.5 164 25.0
Psat1g016440 Pisum sativum HOM05D000045 ORTHO05D009940 2.6e-07 60.5 129 24.8
TPR.G24936 Trifolium pratense HOM05D000045 ORTHO05D000067 2.6e-07 60.5 80 28.8
TAR483G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.6e-07 60.5 82 34.1
Aqoxy6G02203 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.4e-07 60.1 105 28.6
Actinidia26118 Actinidia chinensis HOM05D000045 ORTHO05D000067 4.4e-07 59.7 110 27.3
PSO210G6125 Papaver somniferum HOM05D000045 ORTHO05D009940 4.4e-07 59.7 151 26.5
Psat1g175200 Pisum sativum HOM05D000045 ORTHO05D009940 4.4e-07 59.7 129 24.8
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.4e-07 59.7 91 34.1
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.8e-07 59.3 128 25.0
FvH4_6g38410 Fragaria vesca HOM05D000122 ORTHO05D000067 5.8e-07 59.3 133 30.8
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 5.8e-07 59.3 89 29.2
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 5.8e-07 59.3 89 29.2
Rhsim03G0132200 Rhododendron simsii HOM05D000045 ORTHO05D018237 5.8e-07 59.3 163 25.2
TWI56G1316 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 5.8e-07 59.3 91 34.1
TWI74G0350 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 5.8e-07 59.3 142 25.4
CAN.G168.15 Capsicum annuum HOM05D004033 ORTHO05D002701 7.5e-07 58.9 126 31.0
CiPaw.16G119700 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.5e-07 58.9 175 24.0
Nitab4.5_0001919g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-07 58.9 47 51.1
Nitab4.5_0004232g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-07 58.9 44 56.8
EL10Ac7g17675 Beta vulgaris HOM05D000045 ORTHO05D000067 9.8e-07 58.5 95 25.3
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 9.8e-07 58.5 172 22.7
Rhsim02G0117800 Rhododendron simsii HOM05D000045 ORTHO05D009940 9.8e-07 58.5 87 33.3
TWI60G1550 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.8e-07 58.5 166 27.1
CANSAT64G2947 Cannabis sativa HOM05D000045 ORTHO05D000067 1.3e-06 58.2 188 23.9
Nitab4.5_0006574g0130 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-06 58.2 37 78.4
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 1.3e-06 58.2 180 23.3
Atru.chr1.1265 Acer truncatum HOM05D000045 ORTHO05D009940 1.7e-06 57.8 101 30.7
AUR62041660 Chenopodium quinoa HOM05D000045 ORTHO05D009940 1.7e-06 57.8 88 30.7
Nitab4.5_0002333g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-06 57.8 64 39.1
Os04g0354200 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.7e-06 57.8 121 29.8
Peaxi162Scf00151g00410 Petunia axillaris HOM05D000045 ORTHO05D002701 1.7e-06 57.8 67 35.8
COL.COLO4_24813 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.2e-06 57.4 172 20.9
Nitab4.5_0000216g0250 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-06 57.4 56 46.4
Prupe.7G161500 Prunus persica HOM05D000045 ORTHO05D000067 2.2e-06 57.4 94 30.9
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 2.2e-06 57.4 104 26.9
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 2.2e-06 57.4 104 26.9
SGA_v2.0_scaffold460G51956 Striga asiatica HOM05D018355 ORTHO05D016633 2.2e-06 57.4 99 27.3
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-06 57.4 166 26.5
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-06 57.4 166 26.5
Dinv12602 Davidia involucrata HOM05D012663 ORTHO05D011407 2.9e-06 57.0 148 26.4
Os07g0496300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 3.7e-06 56.6 162 25.3
SGA_v2.0_scaffold290G47325 Striga asiatica HOM05D018355 ORTHO05D016633 3.7e-06 56.6 102 26.5
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 4.9e-06 56.2 153 26.8
EL10Ac3g06437 Beta vulgaris HOM05D000045 ORTHO05D000067 4.9e-06 56.2 93 24.7
MBI09_g36554_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 4.9e-06 56.2 108 34.3
EL10Ac4g09892 Beta vulgaris HOM05D000045 ORTHO05D000067 6.4e-06 55.8 95 33.7
CiPaw.07G027200 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.4e-06 55.8 126 27.8
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 6.4e-06 55.8 172 21.5
Phvul.001G132000 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 6.4e-06 55.8 102 26.5
Psat1g083280 Pisum sativum HOM05D000045 ORTHO05D000067 6.4e-06 55.8 78 37.2
Atru.chr9.771 Acer truncatum HOM05D000045 ORTHO05D000067 8.3e-06 55.5 74 40.5
Actinidia37755 Actinidia chinensis HOM05D023807 ORTHO05D023245 8.3e-06 55.5 52 46.2
CSS0014163 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.3e-06 55.5 108 23.1
AUR62040587 Chenopodium quinoa HOM05D000045 ORTHO05D000067 8.3e-06 55.5 45 48.9
Glyma.03G136800 Glycine max HOM05D000045 ORTHO05D000067 8.3e-06 55.5 102 25.5
MD02G1139600 Malus domestica HOM05D000045 ORTHO05D000067 8.3e-06 55.5 97 27.8


User provided reference genes

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