Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.6e-54 215.7 100 100.0
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.1e-46 188.7 101 87.1
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 4.0e-45 184.5 101 86.1
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 4.4e-44 181.0 101 84.2
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.2e-43 178.7 101 84.2
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 2.4e-42 175.3 91 84.6
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.2e-42 174.9 103 80.6
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.2e-41 172.9 103 79.6
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 2.1e-41 172.2 103 78.6
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.3e-40 169.5 103 77.7
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.7e-40 169.1 96 78.1
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 3.9e-40 167.9 104 74.0
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 5.1e-40 167.5 91 82.4
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 5.1e-40 167.5 91 82.4
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 1.1e-39 166.4 102 74.5
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 1.9e-39 165.6 91 80.2
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 1.9e-39 165.6 97 76.3
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 2.5e-39 165.2 91 80.2
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 3.3e-39 164.9 102 75.5
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 5.6e-39 164.1 104 71.2
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 9.5e-39 163.3 104 73.1
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 1.2e-38 162.9 97 74.2
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.6e-38 162.5 97 73.2
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 1.6e-38 162.5 91 79.1
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 2.1e-38 162.2 91 79.1
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 2.1e-38 162.2 93 76.3
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 2.8e-38 161.8 104 71.2
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 2.8e-38 161.8 91 79.1
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 2.8e-38 161.8 97 73.2
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 1.1e-37 159.8 97 73.2
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 1.8e-37 159.1 102 70.6
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 2.4e-37 158.7 96 74.0
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 3.1e-37 158.3 123 64.2
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 6.8e-37 157.1 91 75.8
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 8.9e-37 156.8 91 73.6
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 8.9e-37 156.8 77 94.8
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 1.2e-36 156.4 105 69.5
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 1.2e-36 156.4 91 76.9
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 2.0e-36 155.6 102 70.6
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 2.0e-36 155.6 103 69.9
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.0e-36 155.6 77 94.8
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 2.6e-36 155.2 91 74.7
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 2.6e-36 155.2 91 73.6
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 5.8e-36 154.1 96 70.8
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 2.2e-35 152.1 92 70.7
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 3.8e-35 151.4 81 87.7
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 6.4e-35 150.6 103 67.0
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 8.4e-35 150.2 91 73.6
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.1e-34 149.8 96 68.8
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.9e-34 149.1 104 65.4
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.9e-34 149.1 101 65.3
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 2.4e-34 148.7 95 70.5
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 5.4e-34 147.5 96 67.7
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 7.1e-34 147.1 100 65.0
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.2e-34 146.7 101 66.3
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 9.2e-34 146.7 101 66.3
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 9.2e-34 146.7 103 67.0
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 3.5e-33 144.8 100 65.0
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 4.6e-33 144.4 110 66.4
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 6.0e-33 144.1 96 65.6
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 1.3e-32 142.9 102 63.7
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.3e-32 142.1 104 65.4
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 3.0e-32 141.7 101 64.4
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.6e-32 140.6 101 64.4
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 8.7e-32 140.2 92 68.5
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.7e-32 140.2 95 66.3
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 8.7e-32 140.2 96 65.6
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 1.9e-31 139.0 99 62.6
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.9e-31 139.0 101 63.4
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.9e-31 139.0 93 65.6
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 7.3e-31 137.1 77 74.0
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 9.6e-31 136.7 95 60.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 2.1e-30 135.6 105 60.0
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.8e-30 135.2 101 62.4
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.8e-30 135.2 100 61.0
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.8e-30 135.2 100 61.0
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 3.6e-30 134.8 93 66.7
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 3.6e-30 134.8 93 64.5
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 8.1e-30 133.7 105 61.9
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.4e-29 132.9 105 58.1
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 2.4e-29 132.1 93 64.5
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 3.1e-29 131.7 105 61.0
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.1e-29 131.7 105 60.0
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 3.1e-29 131.7 93 65.6
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 6.9e-29 130.6 105 60.0
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 6.9e-29 130.6 105 61.0
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 1.2e-28 129.8 77 77.9
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 2.0e-28 129.0 132 48.5
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 2.6e-28 128.6 75 80.0
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 4.4e-28 127.9 93 62.4
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 5.8e-28 127.5 93 62.4
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 9.9e-28 126.7 89 58.4
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.7e-27 125.9 89 62.9
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.2e-27 125.6 110 56.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 2.2e-27 125.6 76 75.0
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 2.2e-27 125.6 95 55.8
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 4.9e-27 124.4 110 55.5
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 4.9e-27 124.4 110 55.5
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 8.4e-27 123.6 124 52.4
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 1.4e-26 122.9 75 70.7
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.4e-26 122.9 95 56.8
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 7.1e-26 120.6 90 56.7
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.1e-25 119.0 75 69.3
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.7e-25 118.6 75 69.3
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 4.6e-25 117.9 109 54.1
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.0e-24 116.7 127 48.8
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 1.3e-24 116.3 69 73.9
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.3e-24 116.3 74 68.9
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.3e-24 116.3 71 70.4
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 2.3e-24 115.5 110 51.8
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 2.3e-24 115.5 69 75.4
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 3.9e-24 114.8 97 47.4
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 8.7e-24 113.6 76 64.5
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.1e-23 113.2 71 70.4
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.8e-22 108.6 70 74.3
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.0e-20 102.4 55 78.2
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 9.9e-20 100.1 77 61.0
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 9.9e-20 100.1 69 66.7
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.2e-19 99.0 74 62.2
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 2.4e-18 95.5 78 59.0
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 2.3e-16 89.0 92 41.3
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 8.7e-16 87.0 110 42.7
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 6.2e-14 80.9 39 84.6
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 4.9e-11 71.2 96 35.4
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.1e-10 70.1 40 75.0
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 4.2e-10 68.2 37 75.7
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 5.5e-10 67.8 53 58.5
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 5.7e-07 57.8 54 51.9


User provided reference genes

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