Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.6e-155 552.7 281 100.0
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 3.0e-138 495.4 303 86.5
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 2.6e-126 455.7 314 78.3
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 4.5e-126 454.9 314 79.0
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 3.8e-125 451.8 314 77.7
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 2.4e-124 449.1 314 77.7
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 4.0e-119 431.8 315 74.6
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 1.5e-113 413.3 314 71.0
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 9.6e-113 410.6 314 69.7
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.1e-112 409.5 314 69.1
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 2.8e-112 409.1 314 69.4
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 1.1e-111 407.1 314 68.8
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 3.1e-111 405.6 314 68.5
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.7e-109 399.8 314 67.8
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 8.5e-109 397.5 314 67.2
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 1.2e-107 393.7 314 66.6
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 1.3e-106 390.2 317 65.6
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-106 389.4 318 66.0
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.0e-106 389.0 318 65.4
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 3.9e-106 388.7 318 65.7
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.9e-106 388.7 318 65.7
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.9e-106 388.7 318 65.7
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 1.5e-105 386.7 318 65.4
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 3.3e-105 385.6 321 64.5
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 9.7e-105 384.0 315 65.4
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 1.1e-103 380.6 321 64.2
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 1.1e-103 380.6 314 64.3
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.4e-103 380.2 319 64.3
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 5.3e-103 378.3 344 60.8
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 6.9e-103 377.9 330 63.3
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 6.9e-103 377.9 316 63.9
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 1.2e-102 377.1 314 62.7
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.5e-102 376.7 318 64.2
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 5.9e-102 374.8 320 62.8
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 7.7e-102 374.4 323 62.8
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 7.7e-102 374.4 318 63.2
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.0e-101 374.0 334 61.7
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 1.0e-101 374.0 324 62.0
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.9e-101 372.5 330 62.1
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 2.9e-101 372.5 322 61.8
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 3.8e-101 372.1 330 62.7
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 5.0e-101 371.7 310 63.2
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 6.5e-101 371.3 319 63.3
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 8.5e-101 370.9 318 64.2
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 1.1e-100 370.5 323 62.2
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 3.2e-100 369.0 296 64.9
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 7.2e-100 367.9 287 65.9
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 1.2e-99 367.1 330 61.5
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 2.1e-99 366.3 321 63.6
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 3.6e-99 365.5 317 62.1
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.4e-98 363.6 296 63.2
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 1.8e-98 363.2 313 62.6
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 2.3e-98 362.8 327 61.2
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 5.1e-98 361.7 349 58.7
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 5.1e-98 361.7 349 58.7
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 6.7e-98 361.3 314 62.1
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 4.4e-97 358.6 326 60.4
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 5.7e-97 358.2 323 59.4
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 5.7e-97 358.2 332 60.5
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 6.3e-96 354.8 324 58.6
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.1e-95 354.0 321 62.3
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.1e-95 354.0 321 62.3
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 4.1e-95 352.1 324 58.6
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 4.1e-95 352.1 335 57.3
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 6.9e-95 351.3 324 58.3
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 9.1e-95 350.9 319 61.4
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 1.2e-94 350.5 324 58.3
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 1.2e-94 350.5 324 58.3
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 1.5e-94 350.1 324 58.3
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 3.4e-94 349.0 324 58.3
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 3.4e-94 349.0 289 61.2
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 5.9e-94 348.2 324 58.3
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 7.7e-94 347.8 324 58.3
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 7.7e-94 347.8 324 58.0
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 1.0e-93 347.4 324 58.0
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 1.3e-93 347.1 325 59.1
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 2.9e-93 345.9 318 60.7
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 5.0e-93 345.1 328 60.1
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 1.1e-92 344.0 323 58.8
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.9e-92 343.2 320 61.2
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 3.2e-92 342.4 323 59.4
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 3.2e-92 342.4 304 62.2
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 7.2e-92 341.3 327 59.9
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 7.2e-92 341.3 325 58.8
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 1.2e-91 340.5 314 59.2
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 2.7e-91 339.3 320 60.3
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 7.9e-91 337.8 314 58.9
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 1.4e-90 337.0 323 58.5
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 3.7e-88 328.9 305 58.0
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 3.1e-87 325.9 323 57.3
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 7.7e-86 321.2 260 65.0
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 1.0e-85 320.9 296 60.8
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 3.3e-81 305.8 324 53.7
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 4.4e-81 305.4 315 56.2
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 3.1e-79 299.3 324 52.8
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 9.8e-73 277.7 329 49.8
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.1e-71 271.2 239 61.9
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 3.8e-69 265.8 290 52.8
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.5e-65 253.8 309 48.9
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 4.5e-62 242.3 251 55.8
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.1e-60 237.7 255 53.7
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 6.1e-59 231.9 220 60.0
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 4.9e-56 222.2 196 63.8
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 8.3e-56 221.5 314 42.0
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 4.1e-55 219.2 272 49.3
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 3.6e-51 206.1 193 60.1
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.4e-47 194.1 141 76.6
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.5e-44 184.1 275 45.5
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.3e-42 176.8 281 37.7
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 9.2e-39 164.9 301 36.2
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 2.8e-35 153.3 334 33.2
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 5.4e-31 139.0 131 56.5
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 7.1e-31 138.7 309 30.7
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.7e-29 134.0 88 78.4
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.6e-25 120.2 263 33.1
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 7.6e-25 118.6 186 41.4
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 1.7e-21 107.5 74 70.3
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 2.3e-21 107.1 99 59.6
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 8.1e-19 98.6 72 65.3
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 6.9e-18 95.5 254 32.3
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.6e-11 74.3 96 44.8


User provided reference genes

Program Settings