Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.3e-65 253.4 186 100.0
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 5.3e-35 151.8 131 99.2
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 5.9e-34 148.3 131 69.5
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 5.0e-33 145.2 131 62.6
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 5.0e-33 145.2 131 62.6
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.5e-32 143.7 131 61.8
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 1.4e-30 137.1 93 72.0
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 6.8e-30 134.8 83 80.7
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 5.7e-29 131.7 84 75.0
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 5.7e-29 131.7 85 75.3
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 2.2e-28 129.8 86 72.1
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 3.7e-28 129.0 84 75.0
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.1e-27 127.5 85 71.8
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.8e-27 126.7 84 72.6
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.8e-27 126.7 84 85.7
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 3.1e-27 125.9 84 73.8
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 3.1e-27 125.9 83 73.5
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 5.4e-27 125.2 84 71.4
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 7.0e-27 124.8 84 71.4
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 7.0e-27 124.8 84 71.4
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 7.0e-27 124.8 84 71.4
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 9.1e-27 124.4 84 71.4
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.2e-26 124.0 84 70.2
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 1.2e-26 124.0 84 79.8
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 1.2e-26 124.0 83 72.3
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.5e-26 122.1 84 70.2
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.5e-26 122.1 84 70.2
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 4.5e-26 122.1 82 86.6
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 4.5e-26 122.1 84 69.0
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 5.9e-26 121.7 84 70.2
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 5.9e-26 121.7 84 69.0
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 5.9e-26 121.7 81 71.6
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 1.0e-25 120.9 84 70.2
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 1.0e-25 120.9 84 72.6
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 2.3e-25 119.8 84 69.0
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 2.3e-25 119.8 84 70.2
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 2.9e-25 119.4 83 73.5
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 3.8e-25 119.0 85 78.8
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 3.8e-25 119.0 84 67.9
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 5.0e-25 118.6 84 71.4
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 5.0e-25 118.6 84 69.0
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 5.0e-25 118.6 84 79.8
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 5.0e-25 118.6 84 69.0
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 5.0e-25 118.6 84 69.0
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 6.6e-25 118.2 86 66.3
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 6.6e-25 118.2 84 69.0
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 6.6e-25 118.2 84 69.0
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 6.6e-25 118.2 83 69.9
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 6.6e-25 118.2 84 69.0
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 8.6e-25 117.9 84 69.0
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 8.6e-25 117.9 84 71.4
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 8.6e-25 117.9 84 67.9
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.1e-24 117.5 85 69.4
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 1.1e-24 117.5 82 73.2
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 1.1e-24 117.5 79 74.7
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.5e-24 117.1 84 66.7
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 1.5e-24 117.1 83 68.7
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.9e-24 116.7 84 67.9
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.9e-24 116.7 79 68.4
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 2.5e-24 116.3 84 66.7
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 2.5e-24 116.3 84 65.5
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 3.3e-24 115.9 84 66.7
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 3.3e-24 115.9 80 71.2
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 3.3e-24 115.9 80 71.2
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 4.2e-24 115.5 84 69.0
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 5.5e-24 115.2 81 72.8
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 7.2e-24 114.8 86 64.0
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 7.2e-24 114.8 83 67.5
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 7.2e-24 114.8 84 65.5
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.2e-23 114.0 86 67.4
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.2e-23 114.0 81 71.6
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.6e-23 113.6 84 72.6
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 2.1e-23 113.2 84 66.7
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.8e-23 112.8 84 67.9
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 2.8e-23 112.8 81 71.6
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 2.8e-23 112.8 87 66.7
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 4.7e-23 112.1 85 67.1
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 6.1e-23 111.7 84 65.5
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 6.1e-23 111.7 86 66.3
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 8.0e-23 111.3 84 78.6
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.4e-22 110.5 84 75.0
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.4e-22 110.5 84 77.4
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 3.0e-22 109.4 84 75.0
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 3.0e-22 109.4 84 75.0
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 3.0e-22 109.4 84 75.0
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 3.0e-22 109.4 84 75.0
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 5.2e-22 108.6 84 60.7
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.2e-22 108.6 84 60.7
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.2e-22 108.6 84 60.7
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.2e-22 108.6 84 60.7
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 6.8e-22 108.2 84 60.7
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 6.8e-22 108.2 84 59.5
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 8.9e-22 107.8 84 64.3
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 1.2e-21 107.5 84 63.1
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.5e-21 107.1 79 67.1
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 7.5e-21 104.8 82 65.9
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 2.2e-20 103.2 78 64.1
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 4.9e-20 102.1 84 73.8
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.1e-19 100.9 78 61.5
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.4e-19 100.5 83 57.8
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 2.7e-18 96.3 85 61.2
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 1.7e-17 93.6 79 55.7
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 2.3e-17 93.2 80 58.8
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 2.9e-17 92.8 84 52.4
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 8.6e-17 91.3 68 69.1
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 4.7e-15 85.5 79 58.2
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 6.1e-15 85.1 71 66.2
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 1.7e-12 77.0 84 45.2
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.7e-12 77.0 85 45.9
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.7e-12 77.0 59 64.4
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.6e-10 70.5 86 44.2
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.6e-10 70.5 86 44.2
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.5e-10 69.3 86 44.2
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.0e-10 68.6 86 43.0
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-09 67.8 86 43.0
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 1.3e-09 67.4 80 46.2
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 1.3e-09 67.4 35 94.3
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 1.1e-08 64.3 57 50.9
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 1.9e-08 63.5 37 75.7
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 5.6e-08 62.0 36 72.2
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 3.6e-07 59.3 47 57.4
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.0e-06 55.8 38 60.5


User provided reference genes

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