Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 7.4e-118 427.2 210 100.0
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.1e-105 386.7 194 97.9
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 1.9e-97 359.4 188 91.5
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 3.0e-95 352.1 186 90.3
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 4.0e-95 351.7 186 90.9
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 5.2e-95 351.3 181 91.7
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 5.2e-95 351.3 186 90.9
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.5e-94 349.7 186 90.3
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 2.0e-94 349.4 196 84.2
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.4e-94 348.6 181 90.6
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 2.2e-93 345.9 182 90.1
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 2.2e-93 345.9 182 90.1
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 1.8e-92 342.8 186 88.2
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 7.0e-92 340.9 186 87.6
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 1.6e-91 339.7 186 84.4
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 1.6e-91 339.7 186 84.4
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.7e-91 339.0 186 83.9
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.7e-91 339.0 186 83.9
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 2.7e-91 339.0 186 85.5
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 4.5e-91 338.2 185 85.4
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 7.8e-91 337.4 186 83.3
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 1.0e-90 337.0 186 82.8
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 1.3e-90 336.7 186 84.9
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 1.7e-90 336.3 186 84.4
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 2.3e-90 335.9 188 84.0
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 2.9e-90 335.5 188 84.6
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 3.9e-90 335.1 187 84.5
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 5.0e-90 334.7 188 84.0
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 5.0e-90 334.7 186 82.3
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 6.6e-90 334.3 186 83.3
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 8.6e-90 334.0 186 83.3
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 1.1e-89 333.6 190 82.1
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 1.1e-89 333.6 186 81.7
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 1.1e-89 333.6 188 84.0
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.5e-89 333.2 186 81.2
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.5e-89 333.2 186 81.2
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 1.9e-89 332.8 186 82.3
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.5e-89 332.4 186 81.7
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 3.3e-89 332.0 186 83.9
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 4.3e-89 331.6 186 81.2
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 5.6e-89 331.3 186 82.8
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 5.6e-89 331.3 186 82.8
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 7.3e-89 330.9 186 82.3
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 7.3e-89 330.9 186 81.7
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 9.5e-89 330.5 186 80.6
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 9.5e-89 330.5 183 85.2
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 2.1e-88 329.3 187 84.0
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 2.8e-88 328.9 186 81.2
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 2.8e-88 328.9 186 82.8
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 2.8e-88 328.9 185 80.5
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 3.6e-88 328.6 186 80.6
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 4.7e-88 328.2 185 81.6
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 4.7e-88 328.2 185 81.6
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 1.4e-87 326.6 182 83.5
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.4e-87 326.6 184 81.5
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 1.4e-87 326.6 186 80.1
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 1.8e-87 326.2 186 81.7
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.8e-87 326.2 186 81.2
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 1.8e-87 326.2 186 80.1
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 2.3e-87 325.9 184 79.9
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 3.1e-87 325.5 186 81.2
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 4.0e-87 325.1 186 82.8
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 4.0e-87 325.1 185 80.0
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 4.0e-87 325.1 186 81.7
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 4.0e-87 325.1 186 79.6
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 5.2e-87 324.7 186 80.6
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 5.2e-87 324.7 186 80.6
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 5.2e-87 324.7 186 80.6
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 5.2e-87 324.7 186 81.2
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 6.8e-87 324.3 186 79.6
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 6.8e-87 324.3 184 80.4
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 8.9e-87 323.9 184 79.9
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 1.2e-86 323.6 186 79.6
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 1.5e-86 323.2 187 80.7
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.5e-86 323.2 185 79.5
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 4.4e-86 321.6 186 79.0
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 4.4e-86 321.6 186 79.0
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 5.8e-86 321.2 186 79.6
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 1.3e-85 320.1 193 78.2
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.9e-85 318.9 186 80.1
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 1.1e-84 317.0 182 80.2
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 1.4e-84 316.6 183 78.7
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.9e-84 316.2 183 78.7
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 1.9e-84 316.2 183 78.7
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 2.4e-84 315.8 183 78.7
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 2.4e-84 315.8 183 78.1
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 7.0e-84 314.3 183 77.0
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 7.0e-84 314.3 186 75.3
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 9.2e-84 313.9 183 77.6
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 9.2e-84 313.9 183 78.7
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 1.2e-83 313.5 183 77.0
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 1.2e-83 313.5 183 77.0
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 1.2e-83 313.5 183 77.0
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 1.2e-83 313.5 183 77.0
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 1.2e-83 313.5 183 77.0
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 2.0e-83 312.8 183 77.0
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 2.7e-83 312.4 183 76.5
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 3.5e-83 312.0 183 76.5
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 4.6e-83 311.6 183 76.5
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.7e-82 309.7 172 82.0
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 5.6e-81 304.7 186 75.8
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 9.5e-81 303.9 184 77.2
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 1.8e-79 299.7 189 72.5
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 1.8e-79 299.7 189 72.5
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 8.9e-79 297.4 187 74.3
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.5e-78 296.6 183 76.5
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 5.8e-78 294.7 187 73.8
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 9.8e-78 293.9 185 73.5
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 1.1e-76 290.4 186 74.2
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 1.4e-76 290.0 186 73.7
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 5.4e-76 288.1 186 72.6
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 9.2e-76 287.3 186 73.7
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 6.0e-75 284.6 186 69.9
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 1.0e-74 283.9 186 72.0
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 3.9e-74 282.0 186 71.5
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 6.6e-74 281.2 186 70.4
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 6.6e-74 281.2 186 71.0
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 6.6e-74 281.2 184 69.6
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 1.9e-73 279.6 173 71.1
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 3.0e-66 255.8 186 63.4
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 3.4e-62 242.3 183 54.6
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 7.8e-59 231.1 181 55.8
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.4e-55 219.5 183 54.1
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 9.0e-55 217.6 177 53.7
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.2e-54 217.2 187 51.3
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 4.9e-53 211.8 172 59.3
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 3.9e-50 202.2 180 49.4
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 1.6e-43 180.3 168 48.8
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 7.4e-41 171.4 180 47.2
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 2.6e-38 162.9 89 88.8
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 2.8e-32 142.9 194 40.7
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 4.8e-24 115.5 60 86.7
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 2.0e-22 110.2 88 56.8
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 4.5e-22 109.0 157 33.8
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 1.7e-08 63.9 88 34.1


User provided reference genes

Program Settings