Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-139 498.0 258 100.0
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-90 336.3 236 79.2
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.6e-84 314.3 236 73.3
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.6e-83 311.6 236 72.9
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-82 309.3 224 77.2
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.8e-79 298.9 208 79.3
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-75 287.3 201 79.6
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-73 280.4 207 75.8
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-73 279.6 259 64.9
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-72 275.0 231 66.2
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-61 239.6 190 70.5
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-60 237.3 192 70.3
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-59 233.4 135 93.3
Nitab4.5_0000068g0360 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-57 226.9 152 84.9
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-57 225.3 203 66.0
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.9e-57 224.9 175 71.4
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.0e-57 224.6 167 77.2
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-56 221.9 175 70.9
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.3e-54 214.5 219 59.8
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.6e-53 212.2 134 85.1
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-52 211.1 187 65.2
Nitab4.5_0000372g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-51 207.2 159 73.0
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.3e-51 205.7 173 71.7
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.2e-50 201.4 134 80.6
Nitab4.5_0007526g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.1e-49 199.1 155 71.0
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-48 197.6 163 71.2
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-48 196.8 150 76.7
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-48 196.8 134 80.6
Nitab4.5_0000727g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-47 193.7 135 77.8
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.4e-47 191.4 122 86.9
Nitab4.5_0000030g0240 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-46 190.3 125 81.6
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.3e-46 188.0 158 65.8
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.6e-45 185.7 122 85.2
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-44 184.1 138 73.9
Nitab4.5_0006206g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-43 181.0 144 74.3
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-43 179.5 122 80.3
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-42 177.6 146 67.1
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-42 176.8 185 60.0
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.8e-42 175.6 118 81.4
Nitab4.5_0000058g0340 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.2e-42 174.9 102 92.2
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-41 173.7 134 71.6
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-40 169.9 136 69.9
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-40 168.7 130 72.3
Nitab4.5_0004122g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-39 167.5 138 67.4
Nitab4.5_0010041g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.5e-39 164.9 95 90.5
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-38 162.5 136 64.7
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-38 162.5 135 65.2
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.5e-38 162.2 134 68.7
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.4e-38 161.4 134 69.4
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.4e-38 161.4 111 81.1
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-37 159.5 130 70.0
Nitab4.5_0016905g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-36 157.9 133 68.4
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-36 156.8 134 65.7
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.8e-36 154.8 122 72.1
Nitab4.5_0009292g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-35 154.5 135 68.1
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-35 153.7 103 80.6
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-35 152.9 106 81.1
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 4.3e-35 152.5 233 41.2
Nitab4.5_0004364g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.7e-35 152.1 143 62.9
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 6.3e-34 148.7 206 43.2
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-33 147.1 130 66.9
Nitab4.5_0003273g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 5.3e-33 145.6 162 54.9
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-32 144.1 133 62.4
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 2.0e-32 143.7 229 41.0
Nitab4.5_0000035g0160 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-32 142.1 90 87.8
Nitab4.5_0022423g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-31 140.6 127 68.5
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.5e-31 138.7 117 71.8
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-30 137.5 119 65.5
Nitab4.5_0000271g0150 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-30 136.3 76 94.7
Nitab4.5_0003972g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-30 136.3 120 63.3
Nitab4.5_0003230g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-30 136.0 86 83.7
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 4.4e-27 125.9 213 38.5
Nitab4.5_0000606g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.7e-27 125.6 158 51.3
Nitab4.5_0000132g0330 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.4e-27 125.2 79 86.1
Nitab4.5_0005662g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-25 121.3 76 82.9
Nitab4.5_0004762g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-25 120.2 162 47.5
Nitab4.5_0001228g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-23 114.8 80 76.2
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 2.2e-23 113.6 215 38.1
Nitab4.5_0000002g0420 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.0e-23 112.5 142 51.4
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-22 110.2 130 50.0
Nitab4.5_0000109g0590 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.2e-22 108.6 209 35.9
Nitab4.5_0009292g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-21 107.8 103 62.1
Nitab4.5_0000007g0280 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-21 105.9 71 77.5
Nitab4.5_0005138g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.1e-21 105.5 64 87.5
Nitab4.5_0000926g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.0e-21 105.1 90 67.8
Nitab4.5_0001124g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-20 104.4 65 86.2
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 2.3e-20 103.6 197 37.6
Nitab4.5_0000248g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-19 100.5 97 58.8
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-19 100.1 131 47.3
Nitab4.5_0000308g0170 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.7e-19 99.0 60 81.7
Nitab4.5_0010681g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-18 96.7 123 48.8
Nitab4.5_0011685g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.3e-18 95.5 71 71.8
Nitab4.5_0000902g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-17 94.0 90 57.8
Nitab4.5_0004007g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-17 94.0 112 49.1
Nitab4.5_0000955g0130 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.1e-17 92.8 155 41.3
Nitab4.5_0006856g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.5e-16 89.7 112 46.4
Nitab4.5_0003806g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.9e-16 89.0 64 73.4
PGSC0003DMG400017016 Solanum tuberosum HOM05D004926 ORTHO05D013907 7.7e-16 88.6 131 40.5
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 2.5e-14 83.6 139 38.1
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.1e-13 80.5 76 63.2
Nitab4.5_0025657g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.0e-13 78.6 52 78.8
Nitab4.5_0000274g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-12 78.2 93 54.8
Nitab4.5_0009292g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-12 77.8 75 58.7
Nitab4.5_0011481g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-12 77.8 93 47.3
Sopen12g009350 Solanum pennellii HOM05D004926 ORTHO05D013907 1.8e-12 77.4 129 36.4
Nitab4.5_0000068g0510 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-11 74.3 44 84.1
Solyc01g015035.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.0e-11 73.9 107 41.1
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 2.0e-11 73.9 206 32.5
Nitab4.5_0002542g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.7e-11 72.4 40 85.0
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 5.7e-11 72.4 87 46.0
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 5.7e-11 72.4 206 31.6
PGSC0003DMG400040719 Solanum tuberosum HOM05D004926 ORTHO05D013907 5.7e-11 72.4 128 35.9
Nitab4.5_0002314g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.5e-11 72.0 119 39.5
Nitab4.5_0009292g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.5e-11 72.0 44 81.8
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 7.5e-11 72.0 206 32.0
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 7.5e-11 72.0 206 32.0
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 9.8e-11 71.6 206 32.0
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-10 71.2 206 31.1
Nitab4.5_0003555g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-10 70.9 40 87.5
Nitab4.5_0000276g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.8e-10 70.1 70 52.9
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 6.3e-10 68.9 77 48.1
Sopen12g016880 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-09 68.2 70 51.4
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-09 67.8 206 31.6
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-09 67.8 212 31.1
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-09 67.0 135 34.1
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 2.4e-09 67.0 206 31.6
Nitab4.5_0002314g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.1e-09 66.6 77 46.8
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-09 66.6 67 53.7
Sopen06g005030 Solanum pennellii HOM05D008695 ORTHO05D001422 4.1e-09 66.2 201 30.8
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 7.0e-09 65.5 118 39.0
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 7.0e-09 65.5 252 28.6
Nitab4.5_0006997g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.5e-08 63.2 72 52.8
Nitab4.5_0000271g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.5e-08 62.8 35 91.4
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 4.5e-08 62.8 204 29.4
Nitab4.5_0000318g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 5.9e-08 62.4 34 85.3
Nitab4.5_0010842g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.7e-08 62.0 112 40.2
Nitab4.5_0005662g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-07 60.8 36 83.3
Nitab4.5_0001685g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.5e-07 58.9 37 81.1
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 58.2 88 40.9
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.1e-06 58.2 51 58.8
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 2.5e-06 57.0 57 52.6
Nitab4.5_0001843g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-06 56.6 35 80.0
Nitab4.5_0002226g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-06 56.6 72 50.0
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.5e-06 55.8 154 29.9
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 5.5e-06 55.8 241 29.0
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.2e-06 55.5 151 29.1


User provided reference genes

Program Settings