Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 8.8e-112 407.1 231 100.0
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 7.7e-108 394.0 231 97.0
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 3.3e-103 378.6 231 91.8
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 3.3e-103 378.6 231 91.3
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 5.7e-103 377.9 231 91.3
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 1.1e-101 373.6 231 92.2
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 2.0e-100 369.4 226 92.0
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 4.1e-85 318.5 214 82.7
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 1.6e-81 306.6 216 78.7
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.8e-80 303.1 214 81.8
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 4.0e-80 302.0 215 70.2
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 8.9e-80 300.8 217 75.1
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 7.5e-79 297.7 216 74.5
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 6.3e-78 294.7 217 75.1
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 7.0e-77 291.2 218 74.8
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 1.6e-76 290.0 215 76.3
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 2.7e-76 289.3 218 66.5
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 3.5e-76 288.9 217 73.7
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 3.5e-76 288.9 215 76.3
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 4.5e-76 288.5 215 76.7
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 1.3e-75 287.0 215 75.3
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 2.3e-75 286.2 213 77.0
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 2.9e-75 285.8 219 72.6
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 3.8e-75 285.4 216 75.0
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 3.8e-75 285.4 216 75.9
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 5.0e-75 285.0 216 70.8
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 6.6e-75 284.6 215 75.8
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 6.6e-75 284.6 213 74.2
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.6e-75 284.3 215 75.8
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.6e-75 284.3 215 75.8
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 1.5e-74 283.5 217 74.7
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 1.5e-74 283.5 209 75.1
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.9e-74 283.1 215 75.3
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.9e-74 283.1 218 72.9
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 3.3e-74 282.3 216 64.4
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.3e-74 282.3 226 62.4
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 3.3e-74 282.3 212 74.5
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 3.3e-74 282.3 213 75.6
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 4.3e-74 282.0 215 73.5
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 9.5e-74 280.8 218 65.1
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-73 280.4 217 71.9
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.1e-73 279.6 219 71.7
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 2.1e-73 279.6 215 73.5
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 2.1e-73 279.6 215 75.3
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 2.8e-73 279.3 226 61.5
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.8e-73 279.3 217 72.4
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 6.1e-73 278.1 217 71.4
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 6.1e-73 278.1 217 73.7
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 6.1e-73 278.1 217 66.4
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 6.1e-73 278.1 217 66.4
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.0e-72 277.3 216 74.1
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.0e-72 277.3 216 74.1
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.0e-72 277.3 218 63.3
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 1.0e-72 277.3 220 61.8
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.4e-72 276.9 217 71.0
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.8e-72 276.6 216 73.6
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 1.8e-72 276.6 216 73.6
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 2.3e-72 276.2 218 62.8
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 4.0e-72 275.4 216 72.7
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 5.2e-72 275.0 212 72.6
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 5.2e-72 275.0 212 71.7
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 6.8e-72 274.6 216 72.2
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 8.9e-72 274.2 166 78.9
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-71 273.9 217 70.5
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.5e-71 273.5 216 72.2
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 2.0e-71 273.1 215 72.6
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 2.0e-71 273.1 215 72.6
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 3.4e-71 272.3 216 72.7
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 4.4e-71 271.9 216 73.1
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 4.4e-71 271.9 171 76.6
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 4.4e-71 271.9 214 73.4
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 4.4e-71 271.9 210 72.9
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 7.5e-71 271.2 207 65.2
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.3e-70 270.4 221 69.7
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 3.7e-70 268.9 211 71.6
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 3.7e-70 268.9 211 70.6
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 8.3e-70 267.7 213 70.4
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 1.1e-69 267.3 219 72.6
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.1e-69 267.3 218 61.5
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.9e-69 266.5 216 60.2
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 3.2e-69 265.8 214 68.2
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 3.2e-69 265.8 210 71.9
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 3.5e-68 262.3 198 75.8
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 1.0e-67 260.8 216 69.0
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.3e-67 260.4 218 60.6
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 5.0e-67 258.5 209 59.8
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 6.6e-67 258.1 207 71.5
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 8.6e-67 257.7 204 73.5
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 1.1e-66 257.3 207 64.3
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 1.5e-66 256.9 209 72.2
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 1.5e-66 256.9 207 72.5
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 1.5e-66 256.9 267 50.9
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 3.3e-66 255.8 207 64.3
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 7.3e-66 254.6 194 74.2
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.8e-65 252.7 209 69.4
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 3.6e-65 252.3 207 72.9
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.8e-64 250.0 166 72.9
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.3e-64 249.6 209 68.9
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 3.1e-64 249.2 207 72.5
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.5e-63 246.9 207 69.6
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 2.6e-63 246.1 219 55.3
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 3.7e-62 242.3 207 70.5
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 6.4e-62 241.5 219 54.3
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 7.0e-61 238.0 207 58.9
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 1.9e-58 229.9 210 61.9
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 1.2e-57 227.3 222 51.8
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 1.8e-56 223.4 216 69.0
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 5.2e-56 221.9 195 62.6
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 2.9e-54 216.1 215 51.2
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 1.3e-51 207.2 215 52.1
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 8.9e-48 194.5 172 58.1
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 2.9e-46 189.5 213 54.5
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 1.0e-43 181.0 175 51.4
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 2.3e-43 179.9 206 53.9
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 6.2e-41 171.8 217 53.9
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 2.2e-38 163.3 152 53.3
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 8.1e-33 144.8 100 71.0
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 9.0e-32 141.4 202 49.0
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 1.4e-21 107.5 97 78.4
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.6e-12 77.4 78 51.3
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.1e-10 71.2 45 71.1
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 4.1e-08 62.8 64 50.0
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-07 60.1 82 42.7
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-07 58.9 81 42.0
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-06 58.2 114 38.6
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-06 58.2 114 38.6


User provided reference genes

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