Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.1e-30 136.7 98 100.0
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.6e-24 115.5 78 85.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.4e-24 115.2 98 89.8
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.3e-23 113.2 79 78.5
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.9e-23 111.3 78 83.3
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.0e-21 104.4 78 83.3
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 6.0e-21 104.4 78 83.3
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.3e-20 103.2 76 81.6
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 3.9e-20 101.7 98 74.5
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 3.9e-20 101.7 76 65.8
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.1e-20 101.3 98 81.6
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 6.6e-20 100.9 69 78.3
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.9e-19 99.4 78 82.1
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 4.3e-19 98.2 98 74.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 7.3e-19 97.4 76 75.0
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.3e-18 96.7 79 77.2
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.6e-18 96.3 98 70.4
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 1.6e-18 96.3 98 75.5
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 1.1e-17 93.6 78 76.9
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.3e-17 91.3 98 64.3
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.5e-16 89.7 79 73.4
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.0e-16 89.4 98 63.3
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.5e-16 88.2 67 59.7
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 9.9e-16 87.0 77 74.0
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 1.7e-15 86.3 47 78.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.2e-15 85.9 47 80.9
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.9e-15 85.5 72 56.9
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 3.8e-15 85.1 50 76.0
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 3.8e-15 85.1 75 66.7
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 6.4e-15 84.3 70 58.6
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 6.4e-15 84.3 76 64.5
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-14 83.2 66 60.6
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.9e-14 82.8 47 78.7
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.9e-14 82.8 47 78.7
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.9e-14 82.8 98 60.2
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.4e-14 82.4 78 52.6
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.2e-14 82.0 49 75.5
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 4.2e-14 81.6 47 74.5
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 4.2e-14 81.6 78 64.1
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 4.2e-14 81.6 74 73.0
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.4e-14 81.3 71 54.9
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.4e-14 81.3 71 54.9
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.1e-14 80.9 75 61.3
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.3e-14 80.5 45 77.8
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 9.3e-14 80.5 76 71.1
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.2e-13 80.1 67 53.7
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 1.6e-13 79.7 48 72.9
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.6e-13 79.7 68 52.9
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-13 79.7 77 58.4
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.1e-13 79.3 77 61.0
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.1e-13 79.3 77 70.1
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.1e-13 79.3 49 73.5
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 3.5e-13 78.6 67 59.7
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 3.5e-13 78.6 89 58.4
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.6e-13 78.2 76 71.1
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.0e-13 77.8 75 69.3
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 6.0e-13 77.8 47 70.2
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.3e-12 76.6 47 72.3
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.3e-12 76.6 43 79.1
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 1.3e-12 76.6 47 72.3
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-12 76.6 46 71.7
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.3e-12 75.9 76 68.4
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 3.0e-12 75.5 45 73.3
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.0e-12 75.5 77 64.9
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 3.9e-12 75.1 74 47.3
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.9e-12 75.1 40 82.5
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 5.1e-12 74.7 43 76.7
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.1e-12 74.7 76 69.7
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 5.1e-12 74.7 78 52.6
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 6.7e-12 74.3 46 71.7
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.7e-12 74.3 69 55.1
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.7e-12 74.3 46 69.6
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.7e-12 73.9 46 65.2
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.7e-12 73.9 46 65.2
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 8.7e-12 73.9 76 48.7
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.7e-12 73.9 73 64.4
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 8.7e-12 73.9 65 66.2
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.5e-11 73.2 44 68.2
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.5e-11 73.2 50 70.0
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.5e-11 73.2 46 71.7
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.9e-11 72.8 43 72.1
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.5e-11 72.4 76 47.4
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.5e-11 72.4 77 64.9
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.3e-11 72.0 75 69.3
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 4.3e-11 71.6 75 65.3
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.6e-11 71.2 44 68.2
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 5.6e-11 71.2 74 48.6
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.6e-11 71.2 67 52.2
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.4e-11 70.9 43 72.1
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 7.4e-11 70.9 74 66.2
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 9.6e-11 70.5 69 62.3
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.3e-10 70.1 42 73.8
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.6e-10 69.7 49 63.3
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-10 69.7 44 72.7
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 1.6e-10 69.7 67 70.1
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 2.1e-10 69.3 43 67.4
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.1e-10 69.3 67 50.7
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-10 69.3 46 73.9
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.8e-10 68.9 76 46.1
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.8e-10 68.9 76 46.1
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.8e-10 68.9 46 69.6
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-10 68.9 45 66.7
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 3.6e-10 68.6 79 64.6
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.6e-10 68.6 53 64.2
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.2e-10 67.8 44 65.9
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.2e-10 67.8 44 65.9
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 8.1e-10 67.4 47 61.7
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-09 67.0 76 44.7
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-09 66.6 45 62.2
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-09 66.6 75 65.3
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.8e-09 66.2 67 46.3
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.4e-09 65.9 70 48.6
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.1e-09 65.5 46 67.4
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.0e-09 65.1 75 45.3
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.3e-09 64.7 67 46.3
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 5.3e-09 64.7 46 63.0
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 6.9e-09 64.3 42 64.3
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.0e-09 63.9 48 62.5
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.2e-08 63.5 74 44.6
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.2e-08 63.5 39 69.2
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.5e-08 63.2 75 64.0
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.0e-08 62.8 67 59.7
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.6e-08 62.4 40 65.0
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 2.6e-08 62.4 73 52.1
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 2.6e-08 62.4 71 43.7
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 2.6e-08 62.4 47 68.1
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.6e-08 62.4 40 60.0
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.4e-08 62.0 69 44.9
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 5.8e-08 61.2 46 58.7
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.6e-08 60.8 76 42.1
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 7.6e-08 60.8 58 75.9
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 7.6e-08 60.8 46 56.5
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.9e-08 60.5 44 61.4
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.9e-08 60.5 44 61.4
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.3e-07 60.1 65 46.2
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.7e-07 59.7 44 59.1
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 1.7e-07 59.7 47 57.4
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.7e-07 59.7 51 58.8
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.2e-07 59.3 43 62.8
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 2.2e-07 59.3 47 57.4
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 2.9e-07 58.9 44 61.4
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.9e-07 58.9 43 62.8
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.9e-07 58.9 43 62.8
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.9e-07 58.9 43 62.8
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.9e-07 58.9 45 55.6
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 8.4e-07 57.4 50 56.0
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 8.4e-07 57.4 46 56.5
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 8.4e-07 57.4 45 57.8
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 8.4e-07 57.4 45 57.8
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 8.4e-07 57.4 45 57.8
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.1e-06 57.0 47 57.4
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 1.1e-06 57.0 45 53.3
EL10Ac1g01574 Beta vulgaris HOM05D002879 ORTHO05D002930 1.4e-06 56.6 66 42.4
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.4e-06 56.6 101 60.4
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.9e-06 56.2 65 44.6
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-06 56.2 45 57.8
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-06 56.2 78 55.1
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-06 56.2 47 55.3
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 2.4e-06 55.8 66 62.1
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 3.2e-06 55.5 76 59.2
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 4.2e-06 55.1 46 56.5
SMO197G0116 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 4.2e-06 55.1 73 38.4
SMO277G0001 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 4.2e-06 55.1 73 38.4
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 5.5e-06 54.7 47 53.2
Rhsim13G0015600 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.5e-06 54.7 77 55.8
SEGI_17221 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.5e-06 54.7 44 56.8
Ah.05g168030 Amaranthus hybridus HOM05D002879 ORTHO05D002930 7.1e-06 54.3 32 75.0
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 7.1e-06 54.3 47 57.4
Hund17450 Selenicereus undatus HOM05D056215 ORTHO05D002930 9.3e-06 53.9 43 58.1
unitig_747.g21665 Utricularia gibba HOM05D002879 ORTHO05D002930 9.3e-06 53.9 44 50.0


User provided reference genes

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