Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.4e-231 805.8 392 100.0
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.2e-171 605.9 377 80.1
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 3.4e-156 555.4 379 72.3
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 6.0e-153 544.7 380 71.6
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 4.4e-148 528.5 377 69.5
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.2e-129 467.2 335 70.1
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 5.3e-85 318.9 369 45.0
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 2.6e-84 316.6 374 46.3
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 6.5e-83 312.0 359 45.4
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.1e-82 311.2 363 43.8
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 3.2e-82 309.7 367 45.5
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 9.4e-82 308.1 365 45.8
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 6.1e-81 305.4 364 43.1
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.8e-80 303.9 366 43.4
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 3.0e-80 303.1 358 43.9
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 5.7e-79 298.9 376 43.6
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 7.5e-79 298.5 365 42.2
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 9.7e-79 298.1 373 43.2
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 2.2e-78 297.0 375 42.4
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 2.8e-78 296.6 375 42.4
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 2.8e-78 296.6 373 43.2
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 4.8e-78 295.8 366 43.4
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 8.2e-78 295.0 372 42.2
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.8e-77 293.9 376 42.0
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 2.4e-77 293.5 361 43.5
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 3.1e-77 293.1 358 44.1
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 7.0e-77 292.0 370 42.2
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 9.1e-77 291.6 372 42.7
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.0e-75 288.1 362 43.6
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 8.5e-75 285.0 360 45.0
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 1.9e-74 283.9 376 43.6
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.5e-74 283.5 374 42.2
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 1.2e-73 281.2 391 40.7
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.2e-73 281.2 374 41.4
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 3.6e-73 279.6 365 39.7
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.8e-72 277.3 375 41.3
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 6.8e-72 275.4 391 40.4
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 2.2e-70 270.4 403 38.7
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 7.0e-69 265.4 336 43.2
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 3.8e-67 259.6 347 40.6
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.1e-66 258.1 254 50.8
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 1.2e-65 254.6 345 39.7
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.8e-64 250.8 361 39.3
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 6.8e-64 248.8 379 38.5
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 6.8e-64 248.8 382 38.0
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 8.8e-64 248.4 375 41.3
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.2e-63 248.1 344 39.0
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.5e-63 247.7 370 38.6
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 5.7e-63 245.7 362 37.8
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.4e-61 240.4 362 37.6
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 4.1e-61 239.6 373 37.0
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 9.2e-61 238.4 359 37.6
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.2e-60 238.0 359 36.5
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 2.7e-60 236.9 308 41.9
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 2.7e-60 236.9 373 36.5
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.6e-59 232.3 264 45.8
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 2.5e-58 230.3 350 39.7
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.2e-57 228.0 376 38.3
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 5.7e-55 219.2 369 36.0
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.0e-52 210.7 365 34.8
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 2.7e-52 210.3 205 52.7
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.5e-52 209.9 313 39.9
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 1.1e-50 204.9 260 44.6
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.6e-49 201.1 364 36.5
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 4.7e-49 199.5 286 38.8
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.4e-48 198.0 366 36.3
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 6.8e-48 195.7 353 34.6
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 4.4e-47 193.0 370 34.1
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 4.4e-47 193.0 357 35.3
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 5.8e-47 192.6 304 36.8
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 9.8e-47 191.8 165 55.8
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.1e-45 188.3 347 36.0
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.9e-45 187.6 357 33.1
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 3.5e-44 183.3 171 55.0
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.0e-43 181.8 354 33.9
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.0e-43 181.8 382 31.7
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 2.5e-42 177.2 354 34.2
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.5e-42 177.2 310 34.8
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 7.3e-42 175.6 356 32.9
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 9.5e-42 175.3 354 33.6
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 9.5e-42 175.3 254 39.4
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 4.7e-41 172.9 353 33.7
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 8.1e-41 172.2 254 40.6
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.4e-40 171.4 309 33.0
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 5.2e-40 169.5 361 34.9
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 8.9e-40 168.7 353 33.4
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 1.2e-39 168.3 353 33.4
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 5.8e-39 166.0 355 32.4
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 7.5e-39 165.6 360 32.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 2.9e-38 163.7 364 31.3
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 4.9e-38 162.9 355 32.1
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.6e-36 157.9 363 32.2
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 2.9e-30 137.1 318 30.8
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.6e-28 131.3 297 32.0
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 8.6e-27 125.6 166 39.2
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.6e-23 114.0 135 45.9
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.4e-21 108.2 405 24.9
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.6e-17 94.7 104 40.4
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 4.5e-15 86.7 130 38.5
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 3.2e-13 80.5 67 52.2
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 3.4e-07 60.5 34 67.6
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 7.6e-07 59.3 169 32.5
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.3e-06 58.5 48 50.0
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 6.4e-06 56.2 292 22.9


User provided reference genes

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