Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 8.6e-94 347.1 184 100.0
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 3.5e-87 325.1 184 94.6
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.7e-86 322.8 184 94.0
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 1.2e-55 220.3 174 74.7
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 7.3e-53 211.1 201 65.7
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 5.3e-51 204.9 201 64.2
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 1.8e-46 189.9 176 67.0
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 6.9e-35 151.4 154 61.7
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 7.2e-32 141.4 166 56.0
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 3.3e-29 132.5 144 56.9
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 2.2e-28 129.8 154 55.8
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 6.9e-27 124.8 137 55.5
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 9.0e-27 124.4 170 50.0
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 1.5e-26 123.6 139 54.7
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.5e-26 122.1 156 52.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.5e-26 122.1 156 52.6
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 5.9e-26 121.7 172 51.2
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 5.0e-25 118.6 167 50.9
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 8.5e-25 117.9 163 47.9
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 8.5e-25 117.9 147 53.1
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 3.2e-24 115.9 150 54.0
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 5.5e-24 115.2 141 51.8
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 5.5e-24 115.2 141 52.5
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 9.4e-24 114.4 148 52.0
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 1.2e-23 114.0 153 51.6
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 1.2e-23 114.0 136 52.9
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 1.2e-23 114.0 175 46.9
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 1.6e-23 113.6 153 47.7
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 2.1e-23 113.2 141 54.6
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 2.1e-23 113.2 146 52.1
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 2.7e-23 112.8 154 51.3
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 4.6e-23 112.1 143 50.3
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 4.6e-23 112.1 141 51.8
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 6.1e-23 111.7 153 51.0
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 6.1e-23 111.7 146 49.3
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 7.9e-23 111.3 136 52.2
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 7.9e-23 111.3 177 44.6
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 7.9e-23 111.3 177 44.6
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 7.9e-23 111.3 104 60.6
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.0e-22 110.9 177 44.1
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 1.0e-22 110.9 177 45.2
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 1.4e-22 110.5 186 44.6
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 2.3e-22 109.8 173 45.7
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 2.3e-22 109.8 138 50.0
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 2.3e-22 109.8 147 50.3
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 2.3e-22 109.8 142 49.3
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.0e-22 109.4 175 44.0
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 3.0e-22 109.4 154 48.7
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 3.0e-22 109.4 154 48.7
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 5.1e-22 108.6 143 51.0
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 5.1e-22 108.6 172 43.6
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 6.7e-22 108.2 146 50.0
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 1.1e-21 107.5 187 44.4
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 1.1e-21 107.5 152 48.0
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 1.5e-21 107.1 141 51.8
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 1.5e-21 107.1 138 50.0
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 2.5e-21 106.3 162 46.9
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 2.5e-21 106.3 76 69.7
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 3.3e-21 105.9 144 50.7
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 4.3e-21 105.5 159 46.5
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 4.3e-21 105.5 159 48.4
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 9.7e-21 104.4 166 43.4
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 9.7e-21 104.4 149 48.3
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 1.3e-20 104.0 146 47.9
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 1.3e-20 104.0 150 47.3
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 4.8e-20 102.1 160 45.6
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 8.2e-20 101.3 144 48.6
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 8.2e-20 101.3 148 46.6
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 8.2e-20 101.3 139 48.2
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 8.2e-20 101.3 137 52.6
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 1.1e-19 100.9 145 47.6
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.4e-19 100.5 151 45.0
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.4e-19 100.5 151 45.0
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 4.1e-19 99.0 147 44.9
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 6.9e-19 98.2 163 42.9
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.5e-18 97.1 148 49.3
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 2.6e-18 96.3 171 42.7
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 2.6e-18 96.3 137 47.4
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 2.6e-18 96.3 148 48.0
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 4.5e-18 95.5 119 49.6
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 1.7e-17 93.6 148 43.9
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 2.9e-17 92.8 75 62.7
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 2.9e-17 92.8 69 72.5
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 6.5e-17 91.7 160 45.6
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 6.5e-17 91.7 160 45.6
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 2.5e-16 89.7 126 50.8
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 4.2e-16 89.0 171 40.4
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 5.5e-16 88.6 126 50.0
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 5.5e-16 88.6 126 50.0
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 7.2e-16 88.2 165 40.0
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 9.4e-16 87.8 126 52.4
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 1.6e-15 87.0 126 48.4
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 2.1e-15 86.7 127 47.2
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 2.7e-15 86.3 126 49.2
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 6.1e-15 85.1 165 42.4
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 6.1e-15 85.1 157 42.7
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 6.1e-15 85.1 126 47.6
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 1.0e-14 84.3 137 45.3
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 1.0e-14 84.3 193 35.8
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 1.0e-14 84.3 142 45.8
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.4e-14 84.0 148 42.6
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.8e-14 83.6 133 45.9
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 2.3e-14 83.2 126 48.4
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 2.3e-14 83.2 131 50.4
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 3.9e-14 82.4 81 53.1
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 2.0e-13 80.1 152 41.4
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.3e-12 77.4 142 40.1
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 2.2e-12 76.6 124 45.2
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.7e-12 75.9 67 62.7
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 8.2e-12 74.7 135 43.0
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.1e-11 74.3 133 39.1
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.5e-10 69.3 91 47.3
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.3e-09 67.4 91 45.1
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 3.8e-09 65.9 60 58.3
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 3.2e-08 62.8 47 66.0


User provided reference genes

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