Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 5.3e-259 897.1 442 100.0
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.4e-214 749.6 513 76.8
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 8.5e-148 527.7 326 82.5
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.2e-146 523.9 321 81.6
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 2.6e-144 516.2 320 81.2
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.4e-134 483.8 327 75.2
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.8e-134 483.4 336 74.1
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 1.0e-132 477.6 317 75.7
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 2.3e-132 476.5 321 76.3
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 8.6e-132 474.6 291 78.4
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 1.5e-131 473.8 321 74.8
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 9.5e-131 471.1 309 77.0
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 4.7e-130 468.8 320 73.8
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 6.1e-130 468.4 317 73.8
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 3.0e-129 466.1 291 76.3
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 4.0e-129 465.7 309 74.8
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 5.2e-129 465.3 323 73.4
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 5.7e-128 461.8 295 76.3
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 9.8e-128 461.1 315 73.3
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 1.3e-127 460.7 334 70.1
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 1.3e-127 460.7 324 73.8
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 2.2e-127 459.9 323 73.1
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 2.2e-127 459.9 324 73.8
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 2.8e-127 459.5 322 73.0
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 2.8e-127 459.5 323 72.4
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 3.7e-127 459.1 326 72.4
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 1.8e-126 456.8 309 74.1
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 3.2e-126 456.1 331 70.7
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 3.2e-126 456.1 318 72.6
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 4.1e-126 455.7 320 70.6
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 5.4e-126 455.3 318 73.3
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 9.2e-126 454.5 308 74.0
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 1.2e-125 454.1 327 71.3
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 1.2e-125 454.1 316 73.1
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 2.0e-125 453.4 328 72.6
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 4.5e-125 452.2 300 75.7
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 7.8e-125 451.4 315 71.4
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 7.8e-125 451.4 321 71.7
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.3e-124 450.7 316 72.5
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.7e-124 450.3 323 71.5
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 2.3e-124 449.9 315 72.7
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 2.3e-124 449.9 321 71.3
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 2.3e-124 449.9 321 71.3
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 2.3e-124 449.9 321 71.3
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 2.9e-124 449.5 319 72.1
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 6.6e-124 448.4 316 72.2
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.5e-123 447.2 333 68.8
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 1.9e-123 446.8 302 73.2
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 2.5e-123 446.4 302 73.2
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 3.3e-123 446.0 317 70.7
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 3.3e-123 446.0 300 75.0
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 4.3e-123 445.7 322 70.2
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 4.3e-123 445.7 322 71.1
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 5.6e-123 445.3 316 71.5
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 5.6e-123 445.3 308 72.1
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 9.5e-123 444.5 329 68.7
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 3.6e-122 442.6 303 72.6
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 3.6e-122 442.6 321 69.2
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 6.1e-122 441.8 297 73.1
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 8.0e-122 441.4 310 71.3
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 8.0e-122 441.4 313 70.0
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 2.3e-121 439.9 323 71.2
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 6.8e-121 438.3 332 68.7
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 8.9e-121 438.0 322 69.6
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 8.9e-121 438.0 322 69.6
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.5e-120 437.2 326 68.7
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 2.0e-120 436.8 319 69.6
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 3.4e-120 436.0 320 68.8
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 4.4e-120 435.6 289 74.4
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 5.8e-120 435.3 328 67.7
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 1.3e-119 434.1 298 71.1
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 2.2e-119 433.3 361 64.3
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 3.7e-119 432.6 326 68.1
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 3.7e-119 432.6 302 70.2
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 4.9e-119 432.2 332 66.9
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 6.4e-119 431.8 325 68.9
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 1.1e-118 431.0 312 70.5
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 1.4e-118 430.6 313 71.6
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 1.4e-118 430.6 298 71.8
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 1.9e-118 430.3 324 67.6
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 1.9e-118 430.3 313 67.1
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 4.1e-118 429.1 328 68.0
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 5.4e-118 428.7 322 68.0
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 5.4e-118 428.7 312 70.2
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 9.2e-118 427.9 310 68.7
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 2.0e-117 426.8 316 67.4
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 2.7e-117 426.4 332 65.1
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 6.0e-117 425.2 318 68.9
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 2.3e-116 423.3 311 68.5
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 5.0e-116 422.2 304 70.1
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 5.0e-116 422.2 328 66.2
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 5.6e-115 418.7 319 67.7
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 6.2e-114 415.2 325 65.2
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 6.2e-114 415.2 297 69.4
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 5.8e-112 408.7 317 66.6
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 5.8e-112 408.7 322 65.8
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 2.9e-111 406.4 251 78.9
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 4.9e-111 405.6 297 68.0
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.4e-110 404.1 328 62.5
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 3.2e-110 402.9 321 66.0
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 3.2e-110 402.9 295 65.4
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 5.4e-110 402.1 319 60.8
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 2.7e-109 399.8 326 63.8
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 6.0e-109 398.7 278 70.9
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 5.1e-108 395.6 311 60.1
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 1.5e-107 394.0 321 63.6
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 1.9e-107 393.7 319 64.3
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.9e-107 393.7 320 65.3
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 3.6e-106 389.4 302 65.9
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 8.1e-106 388.3 321 63.2
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 1.4e-105 387.5 321 62.0
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 1.8e-105 387.1 323 62.2
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 3.1e-105 386.3 320 62.5
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 4.0e-105 386.0 323 62.2
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 5.2e-105 385.6 299 64.9
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 5.2e-105 385.6 321 61.7
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 1.5e-104 384.0 321 62.0
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 1.5e-104 384.0 321 62.0
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 1.5e-104 384.0 275 69.5
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 2.0e-104 383.6 322 61.8
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 2.6e-104 383.3 317 63.1
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 3.4e-104 382.9 337 60.8
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 4.4e-104 382.5 321 61.7
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 4.4e-104 382.5 321 61.7
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 1.7e-103 380.6 321 61.4
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 1.7e-103 380.6 321 61.4
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 8.3e-103 378.3 306 64.7
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 2.4e-102 376.7 325 60.6
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 1.3e-100 370.9 249 72.7
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 2.3e-100 370.2 294 59.5
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 1.1e-99 367.9 313 64.9
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 3.1e-97 359.8 300 62.3
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 1.2e-96 357.8 320 57.5
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 4.2e-94 349.4 286 64.7
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 1.7e-92 344.0 270 64.1
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 1.7e-92 344.0 474 45.8
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 1.6e-90 337.4 216 77.3
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 1.2e-88 331.3 316 56.3
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 1.3e-82 311.2 260 60.4
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 1.8e-81 307.4 310 51.6
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 5.8e-80 302.4 310 49.0
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 9.3e-78 295.0 205 70.2
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 6.0e-77 292.4 272 52.9
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 1.9e-75 287.3 326 49.1
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 1.3e-74 284.6 240 62.5
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 2.1e-74 283.9 216 67.6
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 4.8e-74 282.7 289 49.8
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 2.7e-69 266.9 215 63.3
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 8.7e-68 261.9 215 63.3
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 1.6e-66 257.7 217 60.8
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 2.0e-64 250.8 298 44.3
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 1.3e-63 248.1 164 71.3
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 3.4e-48 196.8 146 68.5
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 9.7e-43 178.7 128 66.4
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 3.7e-42 176.8 104 80.8
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 1.8e-41 174.5 104 79.8
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 4.5e-40 169.9 104 77.9
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 1.2e-37 161.8 103 75.7
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 9.7e-35 152.1 89 76.4
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 3.0e-28 130.6 87 66.7
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 1.0e-20 105.5 272 27.6
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 1.4e-12 78.6 225 27.1


User provided reference genes

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