Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 8.1e-66 253.4 115 100.0
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.8e-36 156.0 77 93.5
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 2.3e-36 155.6 77 93.5
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.0e-36 155.2 77 90.9
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 5.1e-36 154.5 77 93.5
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 1.1e-35 153.3 77 92.2
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 1.5e-35 152.9 77 92.2
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 2.5e-35 152.1 77 92.2
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 2.5e-35 152.1 77 92.2
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 7.4e-35 150.6 77 92.2
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 1.3e-34 149.8 77 89.6
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.6e-34 149.4 77 90.9
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 3.7e-34 148.3 77 89.6
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 3.7e-34 148.3 77 89.6
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 3.7e-34 148.3 77 89.6
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 3.7e-34 148.3 77 89.6
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 3.7e-34 148.3 77 89.6
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 3.7e-34 148.3 77 89.6
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 3.7e-34 148.3 77 89.6
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 4.8e-34 147.9 77 90.9
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 4.8e-34 147.9 77 90.9
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 4.8e-34 147.9 77 90.9
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 4.8e-34 147.9 77 90.9
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 1.1e-33 146.7 77 87.0
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 3.1e-33 145.2 77 88.3
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-33 144.8 77 87.0
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 1.2e-32 143.3 71 91.5
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 1.2e-32 143.3 77 87.0
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-32 143.3 77 87.0
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-32 143.3 77 87.0
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-32 142.9 77 87.0
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-32 142.9 77 87.0
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-32 142.9 77 87.0
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 2.0e-32 142.5 71 91.5
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-32 142.5 77 88.3
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-32 142.5 77 88.3
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-32 142.5 77 88.3
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 4.5e-32 141.4 77 85.7
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.7e-31 139.4 71 90.1
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.7e-31 139.4 71 90.1
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-31 139.4 77 87.0
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 3.8e-31 138.3 77 85.7
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 4.9e-31 137.9 77 83.1
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 6.5e-31 137.5 71 88.7
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 8.4e-31 137.1 77 84.4
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-31 137.1 77 85.7
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-31 137.1 77 85.7
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-31 137.1 77 84.4
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-30 136.3 72 86.1
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-30 135.6 77 84.4
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-30 135.2 74 86.5
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-30 134.8 77 83.1
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 7.1e-30 134.0 71 88.7
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 9.3e-30 133.7 74 83.8
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 85.9
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 85.9
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 85.9
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 85.9
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 85.9
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 85.9
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 85.9
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.5e-29 131.7 71 87.3
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 6.0e-29 131.0 71 87.3
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-28 130.2 74 83.8
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-28 130.2 77 80.5
Nitab4.5_0008337g0090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.9e-28 128.3 65 89.2
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.9e-28 128.3 71 83.1
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 3.9e-28 128.3 71 85.9
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.1e-28 127.9 71 81.7
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-27 124.8 77 77.9
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.6e-26 122.9 59 93.2
Nitab4.5_0001152g1040 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.7e-26 121.7 81 74.1
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.6e-24 115.5 58 89.7
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 4.5e-24 114.8 72 75.0
Solyc09g056310.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.2e-23 112.5 77 74.0
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 7.9e-21 104.0 62 75.8
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 5.1e-20 101.3 50 90.0
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-18 95.9 50 88.0
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 4.8e-18 94.7 50 86.0
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 6.3e-18 94.4 50 86.0
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-17 93.6 50 86.0
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.4e-17 92.4 47 89.4
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 5.3e-17 91.3 50 84.0
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 6.9e-17 90.9 50 84.0
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-16 89.0 54 77.8
Sopen12g024770 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-16 88.6 44 90.9
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 4.5e-16 88.2 50 80.0
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 4.5e-16 88.2 58 74.1
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 5.9e-16 87.8 38 97.4
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 2.2e-15 85.9 47 87.2
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 6.5e-15 84.3 47 83.0
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-14 83.2 77 58.4
Nitab4.5_0000844g0250 Nicotiana tabacum HOM05D001560 ORTHO05D003613 9.4e-14 80.5 37 91.9
Solyc05g018790.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.2e-13 80.1 46 82.6
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.0e-11 72.8 50 70.0
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 4.3e-11 71.6 62 54.8
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-10 69.3 39 87.2
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 9.1e-09 63.9 77 33.8
Zm00001eb387540 Zea mays HOM05D003614 ORTHO05D004156 2.6e-08 62.4 74 41.9
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.0e-07 60.5 27 92.6
ClCG04G005530 Citrullus lanatus HOM05D003614 ORTHO05D004156 1.0e-07 60.5 82 36.6
MELO3C008840.2 Cucumis melo HOM05D003614 ORTHO05D004156 2.2e-07 59.3 82 36.6
CsaV3_4G012020 Cucumis sativus L. HOM05D003614 ORTHO05D004156 2.2e-07 59.3 82 36.6
Peaxi162Scf00122g00065 Petunia axillaris HOM05D001560 ORTHO05D003613 2.2e-07 59.3 38 68.4
Manes.09G100100 Manihot esculenta HOM05D003614 ORTHO05D004156 2.9e-07 58.9 82 35.4
RcHm_v2.0_Chr1g0323821 Rosa chinensis HOM05D003614 ORTHO05D004156 3.8e-07 58.5 93 33.3
Aqoxy6G00302 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 6.5e-07 57.8 93 35.5
PSO017G1060 Papaver somniferum HOM05D003614 ORTHO05D004156 8.5e-07 57.4 78 37.2
PGR119G0394 Punica granatum HOM05D003614 ORTHO05D004156 8.5e-07 57.4 82 39.0
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-06 57.0 30 83.3
FvH4_7g02870 Fragaria vesca HOM05D003614 ORTHO05D004156 1.9e-06 56.2 78 35.9
FAN06G2474 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.9e-06 56.2 78 35.9
PSO017G0346 Papaver somniferum HOM05D003614 ORTHO05D004156 1.9e-06 56.2 78 37.2
FAN03G2482 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.2e-06 55.5 78 35.9
Prupe.2G034000 Prunus persica HOM05D003614 ORTHO05D004156 4.2e-06 55.1 79 32.9
ECA233G5653 Erigeron canadensis HOM05D003614 ORTHO05D004156 5.5e-06 54.7 88 33.0
TWI74G0358 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 5.5e-06 54.7 75 38.7
CANSAT11G2476 Cannabis sativa HOM05D003614 ORTHO05D004156 7.2e-06 54.3 82 37.8
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 9.4e-06 53.9 24 91.7
Potri.005G063750 Populus trichocarpa HOM05D003614 ORTHO05D004156 9.4e-06 53.9 78 38.5


User provided reference genes

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