Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002735g0040 Nicotiana tabacum HOM05D000184 ORTHO05D000032 2.8e-124 448.7 248 100.0
Nitab4.5_0000543g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 1.9e-72 276.6 224 77.7
Solyc08g076010.4 Solanum lycopersicum HOM05D000184 ORTHO05D000032 4.6e-66 255.4 251 69.3
PGSC0003DMG400009304 Solanum tuberosum HOM05D000184 ORTHO05D000032 3.9e-65 252.3 252 68.7
Sopen08g024650 Solanum pennellii HOM05D000184 ORTHO05D000032 8.6e-65 251.1 251 68.5
Peaxi162Scf00408g00321 Petunia axillaris HOM05D000184 ORTHO05D000032 2.5e-64 249.6 251 66.1
CAN.G773.5 Capsicum annuum HOM05D000184 ORTHO05D000032 1.7e-57 226.9 252 64.3
Nitab4.5_0000109g0160 Nicotiana tabacum HOM05D000184 ORTHO05D000032 2.4e-54 216.5 247 58.3
Peaxi162Scf00185g01625 Petunia axillaris HOM05D000184 ORTHO05D000032 2.4e-54 216.5 234 60.7
Peaxi162Scf00615g00011 Petunia axillaris HOM05D000184 ORTHO05D000032 1.0e-41 174.5 247 51.0
Rhsim11G0027000 Rhododendron simsii HOM05D000184 ORTHO05D000032 3.3e-40 169.5 245 51.4
CSS0006111 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 1.8e-38 163.7 245 49.4
Sopen06g024660 Solanum pennellii HOM05D000184 ORTHO05D000032 2.0e-37 160.2 228 55.7
PGSC0003DMG400020455 Solanum tuberosum HOM05D000184 ORTHO05D000032 2.6e-37 159.8 229 52.4
CAN.G1230.17 Capsicum annuum HOM05D000184 ORTHO05D000032 9.9e-37 157.9 228 55.3
Dinv15840 Davidia involucrata HOM05D000184 ORTHO05D000032 1.7e-36 157.1 247 49.4
Hma1.2p1_0979F.1_g243570 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 1.7e-36 157.1 247 49.0
vmacro00073 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 3.8e-36 156.0 245 49.0
vmacro23307 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 3.8e-36 156.0 245 49.0
Actinidia27269 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.5e-35 153.3 232 50.0
Nitab4.5_0004835g0040 Nicotiana tabacum HOM05D000184 ORTHO05D000032 2.5e-35 153.3 250 43.2
Actinidia01272 Actinidia chinensis HOM05D000184 ORTHO05D000032 3.2e-35 152.9 245 47.3
MSTRG.11893 Avicennia marina HOM05D000184 ORTHO05D000032 2.3e-33 146.7 246 47.2
Haze_08099 Corylus avellana HOM05D000184 ORTHO05D000032 2.8e-31 139.8 251 45.4
Cc08_g04300 Coffea canephora HOM05D000184 ORTHO05D000032 6.2e-31 138.7 233 47.2
Lsat_1_v5_gn_3_20841 Lactuca sativa HOM05D000184 ORTHO05D000032 1.1e-30 137.9 244 48.8
MSTRG.25715 Avicennia marina HOM05D000184 ORTHO05D000032 3.1e-30 136.3 246 44.7
TWI60G1306 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 2.0e-29 133.7 244 44.3
FvH4_5g23660 Fragaria vesca HOM05D000184 ORTHO05D000032 3.4e-29 132.9 246 45.9
FAN18G1854 Fragaria x ananassa HOM05D000184 ORTHO05D000032 3.4e-29 132.9 246 45.9
Cfa012563 Carpinus fangiana HOM05D000184 ORTHO05D000032 5.8e-29 132.1 250 45.2
RcHm_v2.0_Chr7g0212961 Rosa chinensis HOM05D000184 ORTHO05D000032 1.3e-28 131.0 246 45.1
Migut.A00576 Erythranthe guttata HOM05D000184 ORTHO05D000032 1.7e-28 130.6 249 45.4
HanXRQChr17g0537661 Helianthus annuus HOM05D000184 ORTHO05D000032 2.2e-28 130.2 243 46.9
FAN13G3333 Fragaria x ananassa HOM05D000184 ORTHO05D000032 8.4e-28 128.3 246 45.5
CSS0029195 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 1.9e-27 127.1 242 45.9
ECA246G3975 Erigeron canadensis HOM05D000184 ORTHO05D000032 4.2e-27 125.9 242 46.3
QL12p000507 Quercus lobata HOM05D000184 ORTHO05D000032 9.3e-27 124.8 250 44.4
SGA_v2.0_scaffold96G29051 Striga asiatica HOM05D000184 ORTHO05D000032 9.3e-27 124.8 246 44.7
FAN13G0376 Fragaria x ananassa HOM05D000184 ORTHO05D000032 4.6e-26 122.5 239 46.0
MD00G1000500 Malus domestica HOM05D000184 ORTHO05D000032 2.3e-25 120.2 248 46.0
GSVIVG01022645001 Vitis vinifera HOM05D000184 ORTHO05D000032 6.7e-25 118.6 249 41.4
TWI34G0506 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 8.7e-25 118.2 246 41.5
CSS0041856 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 1.5e-24 117.5 185 51.9
Nn1g02036 Nelumbo nucifera HOM05D000184 ORTHO05D000032 7.4e-24 115.2 252 43.7
Potri.003G100100 Populus trichocarpa HOM05D000184 ORTHO05D000032 9.7e-24 114.8 251 41.0
Thecc.03G314700 Theobroma cacao HOM05D000184 ORTHO05D000032 9.7e-24 114.8 250 40.0
Lj7A133G23 Lonicera japonica HOM05D000184 ORTHO05D000032 4.8e-23 112.5 239 37.2
VMungo1215G2615 Vigna mungo HOM05D000184 ORTHO05D000032 1.8e-22 110.5 247 44.1
Duzib084G0428 Durio zibethinus HOM05D000184 ORTHO05D000032 2.4e-22 110.2 247 41.3
COL.COLO4_16881 Corchorus olitorius HOM05D001577 ORTHO05D003311 3.1e-22 109.8 257 41.6
Sabra03G0068100 Salix brachista HOM05D000184 ORTHO05D000032 1.2e-21 107.8 252 38.9
FAN04G1742 Fragaria x ananassa HOM05D000184 ORTHO05D000032 3.4e-21 106.3 264 39.0
Glyma.01G009600 Glycine max HOM05D000184 ORTHO05D000032 3.4e-21 106.3 248 41.1
Phvul.002G132500 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 3.4e-21 106.3 244 42.2
Oeu038594.1 Olea europaea HOM05D000184 ORTHO05D000032 4.5e-21 105.9 246 41.1
CSS0023343 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 5.9e-21 105.5 182 49.5
PGR031G0882 Punica granatum HOM05D000184 ORTHO05D000032 5.9e-21 105.5 257 42.4
Migut.N00196 Erythranthe guttata HOM05D000184 ORTHO05D000032 1.0e-20 104.8 240 41.2
Migut.M00636 Erythranthe guttata HOM05D000184 ORTHO05D000032 2.2e-20 103.6 240 40.8
Glyma.09G211400 Glycine max HOM05D000184 ORTHO05D000032 2.9e-20 103.2 242 41.3
Gohir.D08G172800 Gossypium hirsutum HOM05D000184 ORTHO05D000032 2.9e-20 103.2 243 40.7
Potri.001G133400 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.9e-20 103.2 250 39.2
Gorai.004G180000 Gossypium raimondii HOM05D000184 ORTHO05D000032 5.0e-20 102.4 243 39.9
CiPaw.12G070500 Carya illinoinensis HOM05D000184 ORTHO05D000032 8.5e-20 101.7 238 40.3
Manes.17G009200 Manihot esculenta HOM05D000184 ORTHO05D000032 2.5e-19 100.1 239 41.4
Gohir.A08G151700 Gossypium hirsutum HOM05D000184 ORTHO05D000032 9.4e-19 98.2 243 39.1
FAN18G1415 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.6e-18 97.4 189 46.6
Lj2g0015947 Lotus japonicus HOM05D000184 ORTHO05D000032 2.7e-18 96.7 245 41.6
TAR629G1263 Trochodendron aralioides HOM05D000184 ORTHO05D000032 6.1e-18 95.5 256 38.3
FAN08G2667 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.0e-17 94.7 189 46.0
Prupe.5G023700 Prunus persica HOM05D000184 ORTHO05D000032 1.4e-17 94.4 177 45.8
Migut.B00920 Erythranthe guttata HOM05D000184 ORTHO05D000032 3.0e-17 93.2 171 48.5
Ciclev10002089m.g Citrus clementina HOM05D000184 ORTHO05D000032 3.9e-17 92.8 251 40.2
Ca_25145_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 6.7e-17 92.0 246 41.5
PSO063G7571 Papaver somniferum HOM05D000184 ORTHO05D000032 1.1e-16 91.3 259 36.7
SalBow4G1017 Salvia bowleyana HOM05D000184 ORTHO05D000032 2.0e-16 90.5 234 41.5
THA.LOC104798458 Tarenaya hassleriana HOM05D000184 ORTHO05D000032 2.0e-16 90.5 244 38.5
Atru.chr6.1581 Acer truncatum HOM05D000184 ORTHO05D000032 3.3e-16 89.7 250 36.4
DCAR_008191 Daucus carota HOM05D000184 ORTHO05D000032 7.4e-16 88.6 143 39.2
DCAR_004252 Daucus carota HOM05D000184 ORTHO05D000032 1.3e-15 87.8 121 40.5
Solyc06g066180.4 Solanum lycopersicum HOM05D000184 ORTHO05D000032 1.3e-15 87.8 109 52.3
Aqoxy3G02059 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 1.7e-15 87.4 179 44.7
AT5G45580 Arabidopsis thaliana HOM05D000184 ORTHO05D000032 1.7e-15 87.4 245 38.8
BcaC06g31540 Brassica carinata HOM05D000184 ORTHO05D000032 1.7e-15 87.4 243 37.4
A06p46530 Brassica napus HOM05D000184 ORTHO05D000032 2.8e-15 86.7 244 38.5
BraA06t27527Z Brassica rapa HOM05D000184 ORTHO05D000032 2.8e-15 86.7 244 38.5
PSO782G2787 Papaver somniferum HOM05D000184 ORTHO05D000032 2.8e-15 86.7 259 36.7
BcaC06g34425 Brassica carinata HOM05D000184 ORTHO05D000032 3.7e-15 86.3 244 38.1
AL8G13100 Arabidopsis lyrata HOM05D000184 ORTHO05D000032 4.8e-15 85.9 243 38.7
C07p28640 Brassica napus HOM05D000184 ORTHO05D000032 8.2e-15 85.1 244 38.1
BolC7t43403H Brassica oleracea HOM05D000184 ORTHO05D000032 1.4e-14 84.3 244 38.1
Carub.0008s0245 Capsella rubella HOM05D000184 ORTHO05D000032 1.8e-14 84.0 244 37.7
Eucgr.D02611 Eucalyptus grandis HOM05D000184 ORTHO05D000032 2.4e-14 83.6 252 38.1
Thhalv10001175m.g Eutrema salsugineum HOM05D000184 ORTHO05D000032 2.4e-14 83.6 248 36.7
Sp2g10470 Schrenkiella parvula HOM05D000184 ORTHO05D000032 2.4e-14 83.6 243 37.9
CARHR176450 Cardamine hirsuta HOM05D000184 ORTHO05D000032 2.0e-13 80.5 241 37.3
Aa31LG9G7460 Aethionema arabicum HOM05D000184 ORTHO05D000032 3.4e-13 79.7 243 35.0
Nn3g19265 Nelumbo nucifera HOM05D000184 ORTHO05D000032 5.9e-13 79.0 241 39.4
ClCG07G002310 Citrullus lanatus HOM05D000184 ORTHO05D000032 7.7e-13 78.6 254 30.3
Sabra01G0102900 Salix brachista HOM05D000184 ORTHO05D000032 7.7e-13 78.6 171 35.7
MBI04_g27272_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 1.0e-12 78.2 252 37.3
CsaV3_3G030370 Cucumis sativus L. HOM05D000184 ORTHO05D000032 5.0e-12 75.9 254 29.9
Dinv29045 Davidia involucrata HOM05D000184 ORTHO05D000032 5.0e-12 75.9 111 44.1
Os02g0700300 Oryza sativa ssp. japonica HOM05D000184 ORTHO05D000032 6.5e-12 75.5 175 44.0
Sed0011222 Sechium edule HOM05D000184 ORTHO05D000032 8.5e-12 75.1 247 38.1
MELO3C022765.2 Cucumis melo HOM05D000184 ORTHO05D000032 1.4e-11 74.3 247 29.6
Zm00001eb251670 Zea mays HOM05D000184 ORTHO05D000032 4.2e-11 72.8 170 43.5
Duzib068G1271 Durio zibethinus HOM05D000184 ORTHO05D000032 5.5e-11 72.4 167 44.3
Medtr5g027440 Medicago truncatula HOM05D000184 ORTHO05D000032 7.2e-11 72.0 243 35.4
THA.LOC104806180 Tarenaya hassleriana HOM05D000184 ORTHO05D000032 2.3e-09 67.0 243 34.6
Lalb_Chr05g0215541 Lupinus albus HOM05D000184 ORTHO05D000032 3.0e-09 66.6 243 35.8
Gohir.D12G206633 Gossypium hirsutum HOM05D000184 ORTHO05D000032 1.1e-08 64.7 160 40.6
Migut.K00642 Erythranthe guttata HOM05D000184 ORTHO05D000032 1.3e-07 61.2 105 55.2
CANSAT40G0004 Cannabis sativa HOM05D000184 ORTHO05D000032 3.7e-07 59.7 111 41.4
Gorai.008G221900 Gossypium raimondii HOM05D000184 ORTHO05D000032 3.7e-07 59.7 223 33.2
SMO169G0038 Selaginella moellendorffii HOM05D000184 ORTHO05D000032 1.8e-06 57.4 153 41.2
arahy.Tifrunner.gnm1.ann1.T0KD2M Arachis hypogaea HOM05D014240 ORTHO05D016630 4.1e-06 56.2 143 36.4
arahy.Tifrunner.gnm1.ann1.T6PNKD Arachis hypogaea HOM05D014240 ORTHO05D016630 5.3e-06 55.8 157 32.5
PGSC0003DMG400004567 Solanum tuberosum HOM05D000184 ORTHO05D000032 5.3e-06 55.8 172 39.0
Lsat_1_v5_gn_1_61300 Lactuca sativa HOM05D000184 ORTHO05D000032 7.0e-06 55.5 142 38.7
Oeu017680.1 Olea europaea HOM05D000184 ORTHO05D000032 7.0e-06 55.5 144 38.9
CAN.G767.40 Capsicum annuum HOM05D000184 ORTHO05D000032 9.1e-06 55.1 173 39.9
Prupe.1G007000 Prunus persica HOM05D000184 ORTHO05D000032 9.1e-06 55.1 171 38.6


User provided reference genes

Program Settings