Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 2.1e-177 625.5 305 100.0
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 1.4e-170 602.8 305 96.1
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 1.3e-158 563.1 313 89.8
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 3.7e-158 561.6 313 89.5
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 2.4e-157 558.9 313 89.8
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 2.8e-134 482.3 323 74.6
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 4.5e-132 474.9 274 82.1
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 5.9e-132 474.6 323 72.8
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 1.0e-131 473.8 274 82.1
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 1.9e-130 469.5 282 79.8
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 2.5e-130 469.2 312 74.0
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 2.5e-130 469.2 327 71.9
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 5.5e-130 468.0 274 83.2
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 2.1e-129 466.1 274 81.8
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 6.1e-129 464.5 274 81.8
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.8e-128 463.0 274 81.4
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 2.3e-128 462.6 274 81.4
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 5.2e-128 461.5 274 81.4
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 6.8e-128 461.1 281 80.1
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 6.8e-128 461.1 275 80.7
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 8.8e-128 460.7 309 73.8
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 1.2e-127 460.3 288 77.4
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 1.5e-127 459.9 261 85.1
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 2.0e-127 459.5 281 80.1
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 2.6e-127 459.1 276 80.1
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 2.6e-127 459.1 322 69.9
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 2.6e-127 459.1 289 78.5
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 3.4e-127 458.8 262 84.7
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 3.4e-127 458.8 269 82.9
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 4.4e-127 458.4 275 80.4
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 2.8e-126 455.7 280 79.3
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 3.7e-126 455.3 262 82.4
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 3.7e-126 455.3 283 78.8
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 6.3e-126 454.5 274 80.3
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 1.1e-125 453.8 267 82.4
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 1.8e-125 453.0 282 77.3
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 4.1e-125 451.8 268 81.3
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 5.4e-125 451.4 328 71.6
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 1.2e-124 450.3 285 76.5
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 3.5e-124 448.7 265 83.8
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 4.5e-124 448.4 277 79.1
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 5.9e-124 448.0 276 78.6
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 1.3e-123 446.8 275 78.9
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 1.7e-123 446.4 280 77.9
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 1.7e-123 446.4 275 84.0
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 2.2e-123 446.0 315 70.8
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 2.2e-123 446.0 275 78.9
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 2.9e-123 445.7 254 84.6
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 1.5e-122 443.4 275 78.9
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 1.5e-122 443.4 275 78.2
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 3.2e-122 442.2 275 79.3
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 4.2e-122 441.8 275 78.5
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 1.6e-121 439.9 267 77.5
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 1.6e-121 439.9 266 80.5
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 2.1e-121 439.5 272 78.3
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 2.7e-121 439.1 258 81.8
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 2.7e-121 439.1 263 80.2
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 4.7e-121 438.3 315 70.2
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 1.4e-120 436.8 257 82.9
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 3.0e-120 435.6 289 75.4
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 5.2e-120 434.9 257 82.5
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 9.8e-119 430.6 284 73.9
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 1.3e-118 430.3 298 70.8
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 1.7e-118 429.9 274 75.9
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 1.7e-118 429.9 284 73.2
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 1.7e-118 429.9 284 73.2
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 1.7e-118 429.9 284 73.2
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 2.4e-117 426.0 325 68.3
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 7.0e-117 424.5 286 75.2
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 7.0e-117 424.5 300 71.0
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 9.2e-117 424.1 265 76.6
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 2.7e-116 422.5 314 69.1
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 2.5e-114 416.0 274 72.6
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 6.1e-113 411.4 263 77.6
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 6.6e-107 391.3 284 68.7
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 6.6e-107 391.3 226 84.1
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 1.4e-104 383.6 244 79.5
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 1.8e-104 383.3 259 71.8
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 1.1e-101 374.0 289 66.4
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 1.6e-97 360.1 275 67.3
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 2.8e-97 359.4 212 80.7
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 4.0e-96 355.5 203 82.8
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 4.4e-95 352.1 258 65.1
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 5.8e-95 351.7 280 61.4
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 3.5e-92 342.4 223 75.3
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 1.0e-83 314.3 250 57.2
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 7.6e-79 298.1 243 58.4
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 9.3e-77 291.2 216 63.9
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 3.6e-73 279.3 244 62.7
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 3.6e-73 279.3 244 62.7
QL12p001026 Quercus lobata HOM05D001237 ORTHO05D009110 3.2e-69 266.2 165 78.8
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 1.5e-66 257.3 172 74.4
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 1.9e-66 256.9 153 83.7
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 2.8e-57 226.5 135 77.0
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 5.3e-56 222.2 236 53.4
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 4.6e-52 209.1 280 43.2
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 1.3e-46 191.0 271 42.4
HPP92_025933 Vanilla planifolia HOM05D001237 ORTHO05D009110 6.5e-46 188.7 119 78.2
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 1.5e-42 177.6 98 87.8
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 3.3e-42 176.4 295 35.3
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 1.1e-40 171.4 112 75.0
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 2.0e-34 150.6 79 83.5
SalBow1G6490 Salvia bowleyana HOM05D001237 ORTHO05D009110 1.7e-30 137.5 123 56.9
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 7.4e-26 122.1 288 29.5
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 2.6e-23 113.6 324 26.9
FAN04G3094 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.0e-22 111.7 79 69.6
Gohir.D08G172400 Gossypium hirsutum HOM05D001237 ORTHO05D009110 5.0e-22 109.4 105 58.1
SEGI_16157 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 1.8e-19 100.9 77 62.3
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 2.3e-11 73.9 318 26.1
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 5.2e-11 72.8 329 24.9
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 4.4e-10 69.7 309 25.9
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 1.3e-09 68.2 296 24.0
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 2.2e-09 67.4 321 26.2
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 2.2e-09 67.4 308 25.3
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 2.8e-09 67.0 325 24.3
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 6.3e-09 65.9 302 25.5
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 6.3e-09 65.9 289 23.9
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 8.3e-09 65.5 321 25.9
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 1.1e-08 65.1 333 24.6
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.8e-08 64.3 330 24.2
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 9.1e-08 62.0 286 25.5
vmacro14221 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 7.7e-07 58.9 45 66.7
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 1.3e-06 58.2 250 24.0
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 2.3e-06 57.4 296 24.0
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 5.0e-06 56.2 254 25.6
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 6.5e-06 55.8 198 26.8


User provided reference genes

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