Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002731g0040 Nicotiana tabacum HOM05D007552 ORTHO05D009397 1.5e-175 619.4 318 100.0
CAN.G497.96 Capsicum annuum HOM05D007552 ORTHO05D009397 3.1e-83 312.8 442 47.1
Nitab4.5_0007324g0040 Nicotiana tabacum HOM05D007552 ORTHO05D009397 5.5e-80 302.0 476 44.7
Nitab4.5_0000059g0200 Nicotiana tabacum HOM05D007552 ORTHO05D009397 5.1e-70 268.9 522 39.5
Nitab4.5_0007324g0010 Nicotiana tabacum HOM05D007552 ORTHO05D009397 9.1e-67 258.1 516 38.2
PGSC0003DMG400032099 Solanum tuberosum HOM05D007552 ORTHO05D009397 1.6e-55 220.7 522 34.9
Sopen01g032250 Solanum pennellii HOM05D007552 ORTHO05D009397 8.0e-55 218.4 522 34.3
Solyc01g080450.4 Solanum lycopersicum HOM05D007552 ORTHO05D009397 2.3e-54 216.9 522 33.9
CAN.G889.11 Capsicum annuum HOM05D007552 ORTHO05D009397 5.2e-54 215.7 522 34.7
Peaxi162Scf00095g00416 Petunia axillaris HOM05D007552 ORTHO05D009397 1.4e-51 207.6 514 33.1
CSS0021108 Camellia sinensis var. sinensis HOM05D007552 ORTHO05D009397 9.8e-37 158.3 266 37.6
Thecc.10G186400 Theobroma cacao HOM05D007552 ORTHO05D009397 8.6e-33 145.2 523 26.0
Duzib128G1161 Durio zibethinus HOM05D007552 ORTHO05D009397 1.8e-30 137.5 486 25.5
Manes.13G083600 Manihot esculenta HOM05D007552 ORTHO05D009397 4.7e-23 112.8 287 30.0
Duzib114G0042 Durio zibethinus HOM05D007552 ORTHO05D009397 1.2e-21 108.2 367 25.9
Gohir.A05G404600 Gossypium hirsutum HOM05D007552 ORTHO05D009397 3.4e-21 106.7 232 30.2
Hma1.2p1_0517F.1_g170780 Hydrangea macrophylla HOM05D007552 ORTHO05D009397 2.9e-20 103.6 262 30.2
Hund18597 Selenicereus undatus HOM05D007552 ORTHO05D009397 2.9e-20 103.6 290 25.9
Cpa.g.sc155.17 Carica papaya HOM05D007552 ORTHO05D009397 3.7e-20 103.2 160 38.8
Haze_13567 Corylus avellana HOM05D007552 ORTHO05D009397 3.7e-20 103.2 512 23.4
Dinv11901 Davidia involucrata HOM05D007552 ORTHO05D009397 8.3e-20 102.1 529 23.3
Medtr7g025610 Medicago truncatula HOM05D007552 ORTHO05D009397 6.0e-18 95.9 370 25.9
Ca_25555_v3 Cicer arietinum L. HOM05D007552 ORTHO05D009397 1.0e-17 95.1 222 34.7
TPR.G37558 Trifolium pratense HOM05D007552 ORTHO05D009397 1.3e-17 94.7 345 29.0
A06p12740 Brassica napus HOM05D007552 ORTHO05D009397 3.3e-16 90.1 222 27.9
BraA06t24434Z Brassica rapa HOM05D007552 ORTHO05D009397 3.3e-16 90.1 222 27.9
SalBow3G2744 Salvia bowleyana HOM05D007552 ORTHO05D009397 4.3e-16 89.7 290 28.3
Ca_26412_v3 Cicer arietinum L. HOM05D007552 ORTHO05D009397 7.3e-16 89.0 305 28.9
SalBow3G0468 Salvia bowleyana HOM05D007552 ORTHO05D009397 9.5e-16 88.6 296 28.4
CSS0020938 Camellia sinensis var. sinensis HOM05D007552 ORTHO05D009397 1.6e-15 87.8 262 27.5
Ciclev10033432m.g Citrus clementina HOM05D007552 ORTHO05D009397 2.1e-15 87.4 475 21.3
Lj5P680T20 Lonicera japonica HOM05D007552 ORTHO05D009397 2.1e-15 87.4 310 26.1
C05p15050 Brassica napus HOM05D007552 ORTHO05D009397 3.6e-15 86.7 223 27.4
TAR626G0440 Trochodendron aralioides HOM05D007552 ORTHO05D009397 1.1e-14 85.1 275 29.1
Oeu058208.1 Olea europaea HOM05D007552 ORTHO05D009397 5.2e-14 82.8 292 29.8
Ciclev10033582m.g Citrus clementina HOM05D007552 ORTHO05D009397 6.8e-14 82.4 316 24.7
Psat3g178720 Pisum sativum HOM05D007552 ORTHO05D009397 8.9e-14 82.0 275 25.8
Thhalv10007086m.g Eutrema salsugineum HOM05D007552 ORTHO05D009397 1.2e-13 81.6 174 29.9
TWI75G0828 Tripterygium wilfordii HOM05D007552 ORTHO05D009397 2.6e-13 80.5 157 31.8
TAR626G0934 Trochodendron aralioides HOM05D007552 ORTHO05D009397 2.2e-12 77.4 304 24.0
THA.LOC104812327 Tarenaya hassleriana HOM05D007552 ORTHO05D009397 2.9e-12 77.0 157 32.5
Aa31LG7G1270 Aethionema arabicum HOM05D007552 ORTHO05D009397 1.1e-11 75.1 81 43.2
CARHR017300 Cardamine hirsuta HOM05D007552 ORTHO05D009397 1.1e-11 75.1 156 32.7
MELO3C002831.2 Cucumis melo HOM05D007552 ORTHO05D009397 3.2e-11 73.6 51 60.8
QL08p045079 Quercus lobata HOM05D007552 ORTHO05D009397 3.2e-11 73.6 52 67.3
QL93p2016_0066 Quercus lobata HOM05D007552 ORTHO05D009397 3.2e-11 73.6 52 67.3
COL.COLO4_19487 Corchorus olitorius HOM05D007552 ORTHO05D009397 4.1e-11 73.2 262 25.2
BcaC05g25539 Brassica carinata HOM05D007552 ORTHO05D009397 5.4e-11 72.8 157 29.9
BolC5t30220H Brassica oleracea HOM05D007552 ORTHO05D009397 5.4e-11 72.8 157 29.9
QL08p045116 Quercus lobata HOM05D007552 ORTHO05D009397 5.4e-11 72.8 52 67.3
AL1G29000 Arabidopsis lyrata HOM05D007552 ORTHO05D009397 9.2e-11 72.0 159 32.1
Gohir.D04G011100 Gossypium hirsutum HOM05D007552 ORTHO05D009397 2.1e-10 70.9 68 48.5
Cc02_g21230 Coffea canephora HOM05D007552 ORTHO05D009397 3.5e-10 70.1 51 64.7
Sp1g14970 Schrenkiella parvula HOM05D007552 ORTHO05D009397 3.5e-10 70.1 157 31.2
TPR.G20566 Trifolium pratense HOM05D007552 ORTHO05D009397 6.0e-10 69.3 187 29.4
QL07p010391 Quercus lobata HOM05D007552 ORTHO05D009397 7.8e-10 68.9 52 63.5
Sed0019272 Sechium edule HOM05D007552 ORTHO05D009397 1.0e-09 68.6 51 56.9
Actinidia35910 Actinidia chinensis HOM05D007552 ORTHO05D009397 1.3e-09 68.2 51 64.7
CsaV3_1G037150 Cucumis sativus L. HOM05D007552 ORTHO05D009397 1.7e-09 67.8 51 58.8
Eucgr.F04004 Eucalyptus grandis HOM05D007552 ORTHO05D009397 1.7e-09 67.8 51 62.7
Sed0018321 Sechium edule HOM05D007552 ORTHO05D009397 2.3e-09 67.4 86 44.2
Actinidia38807 Actinidia chinensis HOM05D007552 ORTHO05D009397 3.0e-09 67.0 51 62.7
Gorai.012G013300 Gossypium raimondii HOM05D007552 ORTHO05D009397 3.9e-09 66.6 66 47.0
vmacro06800 Vaccinium macrocarpon HOM05D007552 ORTHO05D009397 3.9e-09 66.6 51 62.7
MSTRG.22501 Avicennia marina HOM05D007552 ORTHO05D009397 1.9e-08 64.3 50 58.0
BcaB02g06673 Brassica carinata HOM05D007552 ORTHO05D009397 2.5e-08 63.9 157 28.0
Rhsim08G0249900 Rhododendron simsii HOM05D007552 ORTHO05D009397 7.3e-08 62.4 48 58.3
Migut.I01195 Erythranthe guttata HOM05D007552 ORTHO05D009397 1.2e-07 61.6 107 32.7
MBI04_g20974_MAGBIO Magnolia biondii HOM05D007552 ORTHO05D009397 1.2e-07 61.6 51 54.9
Prupe.3G022400 Prunus persica HOM05D007552 ORTHO05D009397 2.1e-07 60.8 51 52.9
TAR374G0143 Trochodendron aralioides HOM05D000001 ORTHO05D009335 2.1e-07 60.8 183 27.3
Ciclev10004726m.g Citrus clementina HOM05D000001 ORTHO05D009335 4.7e-07 59.7 181 26.5
Gohir.A05G020200 Gossypium hirsutum HOM05D000001 ORTHO05D000003 4.7e-07 59.7 169 29.0
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 4.7e-07 59.7 221 25.3
ATR0776G035 Amborella trichopoda HOM05D007552 ORTHO05D009397 1.1e-06 58.5 51 52.9
Nitab4.5_0003441g0070 Nicotiana tabacum HOM05D005362 ORTHO05D006895 1.1e-06 58.5 220 24.5
Ca_25540_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 1.4e-06 58.2 189 26.5
MELO3C003915.2 Cucumis melo HOM05D000001 ORTHO05D000003 1.4e-06 58.2 206 26.2
MD17G1163100 Malus domestica HOM05D007552 ORTHO05D009397 1.4e-06 58.2 51 52.9
MBI06_g05054_MAGBIO Magnolia biondii HOM05D005362 ORTHO05D006895 1.8e-06 57.8 237 23.6
PSO478G0308 Papaver somniferum HOM05D000001 ORTHO05D009335 1.8e-06 57.8 199 25.1
GSVIVG01029542001 Vitis vinifera HOM05D007552 ORTHO05D009397 1.8e-06 57.8 61 44.3
AL7G27870 Arabidopsis lyrata HOM05D000001 ORTHO05D009335 2.3e-06 57.4 169 26.0
Eucgr.C04158 Eucalyptus grandis HOM05D000001 ORTHO05D000003 2.3e-06 57.4 155 26.5
Lj6C66G1 Lonicera japonica HOM05D007552 ORTHO05D009397 2.3e-06 57.4 189 27.0
Medtr7g082160 Medicago truncatula HOM05D008684 ORTHO05D010796 2.3e-06 57.4 232 26.3
Nn3g20313 Nelumbo nucifera HOM05D018609 ORTHO05D019561 2.3e-06 57.4 226 23.9
vmacro11106 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 2.3e-06 57.4 224 25.0
AT2G17210 Arabidopsis thaliana HOM05D000001 ORTHO05D000003 3.1e-06 57.0 220 23.6
Gohir.D05G021300 Gossypium hirsutum HOM05D000001 ORTHO05D000003 3.1e-06 57.0 169 28.4
Gorai.009G021500 Gossypium raimondii HOM05D000001 ORTHO05D000003 3.1e-06 57.0 169 28.4
Atru.chr1.675 Acer truncatum HOM05D000001 ORTHO05D009335 4.0e-06 56.6 181 26.5
CANSAT25G1295 Cannabis sativa HOM05D000001 ORTHO05D000003 4.0e-06 56.6 232 22.8
CsaV3_2G009190 Cucumis sativus L. HOM05D000001 ORTHO05D000003 4.0e-06 56.6 206 26.2
Peaxi162Scf00201g00422 Petunia axillaris HOM05D005362 ORTHO05D006895 4.0e-06 56.6 222 23.9
Thecc.03G158300 Theobroma cacao HOM05D000001 ORTHO05D009335 4.0e-06 56.6 171 28.7
vmacro16033 Vaccinium macrocarpon HOM05D003056 ORTHO05D003422 4.0e-06 56.6 101 31.7
Aqoxy7G00693 Aquilegia oxysepala HOM05D000001 ORTHO05D009335 5.2e-06 56.2 183 25.7
Migut.B00504 Erythranthe guttata HOM05D005362 ORTHO05D006895 5.2e-06 56.2 222 23.4
CiPaw.11G055600 Carya illinoinensis HOM05D005362 ORTHO05D006895 6.8e-06 55.8 236 23.7
Atru.chr1.670 Acer truncatum HOM05D000001 ORTHO05D009335 8.9e-06 55.5 181 26.0
CANSAT54G1473 Cannabis sativa HOM05D007552 ORTHO05D009397 8.9e-06 55.5 51 49.0
Lalb_Chr15g0077181 Lupinus albus HOM05D000001 ORTHO05D000003 8.9e-06 55.5 216 24.1
MD09G1165000 Malus domestica HOM05D007552 ORTHO05D009397 8.9e-06 55.5 51 51.0
Nitab4.5_0000939g0040 Nicotiana tabacum HOM05D005362 ORTHO05D006895 8.9e-06 55.5 220 23.6
THA.LOC104811517 Tarenaya hassleriana HOM05D000001 ORTHO05D009335 8.9e-06 55.5 155 28.4
vmacro13799 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 8.9e-06 55.5 128 28.1
HPP92_028166 Vanilla planifolia HOM05D000001 ORTHO05D000003 8.9e-06 55.5 167 25.1


User provided reference genes

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