Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002729g0010 Nicotiana tabacum HOM05D011877 ORTHO05D010553 4.6e-150 534.6 291 100.0
Nitab4.5_0003082g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 9.0e-122 440.7 303 79.5
Sopen06g031020 Solanum pennellii HOM05D011877 ORTHO05D010553 2.7e-49 199.9 298 47.0
Solyc06g074550.3 Solanum lycopersicum HOM05D011877 ORTHO05D010553 2.3e-48 196.8 288 46.9
PGSC0003DMG400007124 Solanum tuberosum HOM05D011877 ORTHO05D010553 2.8e-46 189.9 292 46.2
Nitab4.5_0009666g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 4.1e-42 176.0 300 41.7
Nitab4.5_0001453g0080 Nicotiana tabacum HOM05D011877 ORTHO05D010553 9.2e-42 174.9 295 42.4
Peaxi162Scf00789g00061 Petunia axillaris HOM05D011877 ORTHO05D010553 4.6e-25 119.4 307 35.8
Dinv12524 Davidia involucrata HOM05D011404 ORTHO05D010553 1.2e-17 94.7 335 33.1
Nitab4.5_0003082g0030 Nicotiana tabacum HOM05D011877 ORTHO05D010553 1.8e-16 90.9 50 94.0
Manes.11G157000 Manihot esculenta HOM05D011404 ORTHO05D010553 1.1e-15 88.2 316 31.3
Manes.04G008500 Manihot esculenta HOM05D011404 ORTHO05D010553 2.5e-15 87.0 295 31.5
TAR633G2541 Trochodendron aralioides HOM05D011404 ORTHO05D010553 4.8e-14 82.8 347 28.0
Cfa010082 Carpinus fangiana HOM05D011404 ORTHO05D010553 6.2e-14 82.4 282 32.6
Oeu050181.1 Olea europaea HOM05D011877 ORTHO05D010553 8.1e-14 82.0 287 30.7
Potri.009G149000 Populus trichocarpa HOM05D011404 ORTHO05D010553 1.4e-13 81.3 339 27.7
Potri.004G188300 Populus trichocarpa HOM05D011404 ORTHO05D010553 4.0e-13 79.7 315 28.9
Haze_23449 Corylus avellana HOM05D011404 ORTHO05D010553 2.0e-12 77.4 286 29.4
Sabra09G0117600 Salix brachista HOM05D011404 ORTHO05D010553 2.0e-12 77.4 316 29.1
Sabra04G0127300 Salix brachista HOM05D011404 ORTHO05D010553 3.4e-12 76.6 338 27.8
Lsat_1_v5_gn_1_61941 Lactuca sativa HOM05D011877 ORTHO05D010553 8.4e-11 72.0 286 31.1
MELO3C021450.2 Cucumis melo HOM05D024769 ORTHO05D010553 1.1e-10 71.6 295 29.2
ClCG02G021920 Citrullus lanatus HOM05D024769 ORTHO05D010553 1.9e-10 70.9 326 28.5
CsaV3_6G014740 Cucumis sativus L. HOM05D024769 ORTHO05D010553 4.2e-10 69.7 296 29.1
Lj3g0007201 Lotus japonicus HOM05D011197 ORTHO05D010553 2.7e-09 67.0 264 26.5
Lsat_1_v5_gn_2_96940 Lactuca sativa HOM05D011877 ORTHO05D010553 6.0e-09 65.9 284 28.5
TAR623G0178 Trochodendron aralioides HOM05D011404 ORTHO05D010553 7.9e-09 65.5 361 26.9
Lj2P994T14 Lonicera japonica HOM05D011877 ORTHO05D010553 1.0e-08 65.1 305 29.2
Nn2g13996 Nelumbo nucifera HOM05D011404 ORTHO05D010553 2.3e-08 63.9 124 35.5
QL01p013727 Quercus lobata HOM05D011404 ORTHO05D010553 8.7e-08 62.0 312 29.8
COL.COLO4_19296 Corchorus olitorius HOM05D011197 ORTHO05D010553 2.5e-07 60.5 274 29.9
Thecc.09G291600 Theobroma cacao HOM05D011197 ORTHO05D010553 7.4e-07 58.9 262 25.2
HanXRQChr14g0451971 Helianthus annuus HOM05D011877 ORTHO05D010553 9.6e-07 58.5 121 37.2
Nn6g35047 Nelumbo nucifera HOM05D011404 ORTHO05D010553 1.6e-06 57.8 127 34.6
ATR0820G036 Amborella trichopoda HOM05D024769 ORTHO05D010553 3.7e-06 56.6 100 35.0
Aqoxy1G00938 Aquilegia oxysepala HOM05D011404 ORTHO05D010553 3.7e-06 56.6 350 25.4


User provided reference genes

Program Settings