Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002724g0110 Nicotiana tabacum HOM05D001187 ORTHO05D000993 4.2e-24 114.0 63 100.0
Sopen07g001830 Solanum pennellii HOM05D001187 ORTHO05D000993 8.7e-14 79.7 68 69.1
Solyc07g005730.4 Solanum lycopersicum HOM05D001187 ORTHO05D000993 1.5e-13 79.0 68 69.1
Nitab4.5_0005869g0010 Nicotiana tabacum HOM05D001187 ORTHO05D000993 4.3e-13 77.4 72 66.7
Nitab4.5_0002724g0120 Nicotiana tabacum HOM05D001187 ORTHO05D000993 7.4e-13 76.6 72 65.3
Peaxi162Scf00401g00423 Petunia axillaris HOM05D001187 ORTHO05D000993 2.4e-11 71.6 73 63.0
BcaNung02968 Brassica carinata HOM05D001187 ORTHO05D000993 3.1e-11 71.2 70 57.1
Solyc07g005720.3 Solanum lycopersicum HOM05D001187 ORTHO05D000993 4.1e-11 70.9 72 61.1
Nitab4.5_0017193g0020 Nicotiana tabacum HOM05D001187 ORTHO05D000993 5.3e-11 70.5 39 92.3
PGSC0003DMG400011144 Solanum tuberosum HOM05D001187 ORTHO05D000993 5.3e-11 70.5 72 61.1
Oeu026458.1 Olea europaea HOM05D001187 ORTHO05D000993 1.2e-10 69.3 72 56.9
CARHR238540 Cardamine hirsuta HOM05D001187 ORTHO05D000993 1.5e-10 68.9 67 58.2
AL7G21480 Arabidopsis lyrata HOM05D001187 ORTHO05D000993 2.0e-10 68.6 67 58.2
AT4G30660 Arabidopsis thaliana HOM05D001187 ORTHO05D000993 2.0e-10 68.6 67 58.2
FvH4_1g00770 Fragaria vesca HOM05D001187 ORTHO05D000993 2.6e-10 68.2 67 58.2
FAN23G3079 Fragaria x ananassa HOM05D001187 ORTHO05D000993 2.6e-10 68.2 67 58.2
FAN26G1688 Fragaria x ananassa HOM05D001187 ORTHO05D000993 2.6e-10 68.2 67 58.2
FAN28G2155 Fragaria x ananassa HOM05D001187 ORTHO05D000993 2.6e-10 68.2 67 58.2
Carub.0007s0990 Capsella rubella HOM05D001187 ORTHO05D000993 3.4e-10 67.8 67 56.7
HanXRQChr03g0065571 Helianthus annuus HOM05D001187 ORTHO05D000993 3.4e-10 67.8 72 55.6
Cc06_g14800 Coffea canephora HOM05D001187 ORTHO05D000993 4.5e-10 67.4 73 57.5
Thhalv10026719m.g Eutrema salsugineum HOM05D001187 ORTHO05D000993 4.5e-10 67.4 61 63.9
arahy.Tifrunner.gnm1.ann1.FNXM9K Arachis hypogaea HOM05D001187 ORTHO05D000993 5.9e-10 67.0 67 56.7
arahy.Tifrunner.gnm1.ann1.KJF1LC Arachis hypogaea HOM05D001187 ORTHO05D000993 5.9e-10 67.0 67 58.2
Haze_19186 Corylus avellana HOM05D001187 ORTHO05D000993 5.9e-10 67.0 67 56.7
Gohir.D13G189884 Gossypium hirsutum HOM05D001187 ORTHO05D000993 5.9e-10 67.0 67 58.2
Gorai.013G215700 Gossypium raimondii HOM05D001187 ORTHO05D000993 5.9e-10 67.0 67 58.2
TPR.G13206 Trifolium pratense HOM05D001187 ORTHO05D000993 5.9e-10 67.0 67 56.7
BcaC09g51859 Brassica carinata HOM05D001187 ORTHO05D000993 7.7e-10 66.6 69 55.1
BcaNung02969 Brassica carinata HOM05D001187 ORTHO05D000993 7.7e-10 66.6 70 55.7
C01p08240 Brassica napus HOM05D001187 ORTHO05D000993 7.7e-10 66.6 69 55.1
BolC1t00812H Brassica oleracea HOM05D001187 ORTHO05D000993 7.7e-10 66.6 69 55.1
arahy.Tifrunner.gnm1.ann1.1B50KW Arachis hypogaea HOM05D001187 ORTHO05D000993 1.0e-09 66.2 67 55.2
A03p36730 Brassica napus HOM05D001187 ORTHO05D000993 1.0e-09 66.2 61 60.7
Sed0022929 Sechium edule HOM05D001187 ORTHO05D000993 1.0e-09 66.2 67 55.2
RcHm_v2.0_Chr2g0085501 Rosa chinensis HOM05D001187 ORTHO05D000993 1.3e-09 65.9 67 58.2
BcaNung04557 Brassica carinata HOM05D001187 ORTHO05D000993 1.7e-09 65.5 57 66.7
Cfa020809 Carpinus fangiana HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 55.2
Duzib168G1331 Durio zibethinus HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 56.7
Gohir.A13G183700 Gossypium hirsutum HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 56.7
Medtr4g130675 Medicago truncatula HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 55.2
Psat0s1535g0040 Pisum sativum HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 52.2
Potri.006G182500 Populus trichocarpa HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 58.2
QL02p093596 Quercus lobata HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 55.2
Sp7g28570 Schrenkiella parvula HOM05D001187 ORTHO05D000993 1.7e-09 65.5 57 66.7
Thecc.09G028400 Theobroma cacao HOM05D001187 ORTHO05D000993 1.7e-09 65.5 67 56.7
BcaC09g51860 Brassica carinata HOM05D001187 ORTHO05D000993 2.2e-09 65.1 61 60.7
A01p07590 Brassica napus HOM05D001187 ORTHO05D000993 2.2e-09 65.1 61 60.7
C01p08230 Brassica napus HOM05D001187 ORTHO05D000993 2.2e-09 65.1 61 60.7
BolC1t00811H Brassica oleracea HOM05D001187 ORTHO05D000993 2.2e-09 65.1 61 60.7
BraA01t00702Z Brassica rapa HOM05D001187 ORTHO05D000993 2.2e-09 65.1 61 60.7
ClCG06G012500 Citrullus lanatus HOM05D001187 ORTHO05D000993 2.2e-09 65.1 67 55.2
Peaxi162Scf00401g00424 Petunia axillaris HOM05D001187 ORTHO05D000993 2.2e-09 65.1 56 73.2
Phvul.003G155150 Phaseolus vulgaris HOM05D001187 ORTHO05D000993 2.2e-09 65.1 67 55.2
SGA_v2.0_scaffold63G21781 Striga asiatica HOM05D001187 ORTHO05D000993 2.2e-09 65.1 61 62.3
TWI63G0408 Tripterygium wilfordii HOM05D001187 ORTHO05D000993 2.2e-09 65.1 67 55.2
GSVIVG01023629001 Vitis vinifera HOM05D001187 ORTHO05D000993 2.2e-09 65.1 67 53.7
A01p07600 Brassica napus HOM05D001187 ORTHO05D000993 2.9e-09 64.7 67 55.2
A03p60220 Brassica napus HOM05D001187 ORTHO05D000993 2.9e-09 64.7 57 64.9
BolC7t46272H Brassica oleracea HOM05D001187 ORTHO05D000993 2.9e-09 64.7 57 64.9
BraA01t00703Z Brassica rapa HOM05D001187 ORTHO05D000993 2.9e-09 64.7 67 55.2
CSS0047253 Camellia sinensis var. sinensis HOM05D001187 ORTHO05D000993 2.9e-09 64.7 73 54.8
CiPaw.15G166700 Carya illinoinensis HOM05D001187 ORTHO05D000993 2.9e-09 64.7 67 55.2
DCAR_014805 Daucus carota HOM05D001187 ORTHO05D000993 2.9e-09 64.7 72 54.2
Lj4g0006985 Lotus japonicus HOM05D001187 ORTHO05D000993 2.9e-09 64.7 61 60.7
Medtr4g130660 Medicago truncatula HOM05D001187 ORTHO05D000993 2.9e-09 64.7 61 57.4
Sp7g28560 Schrenkiella parvula HOM05D001187 ORTHO05D000993 2.9e-09 64.7 67 55.2
Gohir.A05G052800 Gossypium hirsutum HOM05D001187 ORTHO05D000993 3.8e-09 64.3 67 55.2
Gohir.A06G098002 Gossypium hirsutum HOM05D001187 ORTHO05D000993 3.8e-09 64.3 67 55.2
Gohir.D05G054432 Gossypium hirsutum HOM05D001187 ORTHO05D000993 3.8e-09 64.3 67 55.2
Gohir.D06G098600 Gossypium hirsutum HOM05D001187 ORTHO05D000993 3.8e-09 64.3 67 55.2
MD02G1006300 Malus domestica HOM05D001187 ORTHO05D000993 3.8e-09 64.3 67 55.2
Aa31LG2G19770 Aethionema arabicum HOM05D001187 ORTHO05D000993 5.0e-09 63.9 67 55.2
BcaC08g44007 Brassica carinata HOM05D001187 ORTHO05D000993 5.0e-09 63.9 61 59.0
C02p24680 Brassica napus HOM05D001187 ORTHO05D000993 5.0e-09 63.9 61 60.7
MELO3C010211.2 Cucumis melo HOM05D001187 ORTHO05D000993 5.0e-09 63.9 67 55.2
Thhalv10026723m.g Eutrema salsugineum HOM05D001187 ORTHO05D000993 5.0e-09 63.9 67 53.7
Hma1.2p1_0222F.1_g093670 Hydrangea macrophylla HOM05D001187 ORTHO05D000993 5.0e-09 63.9 67 52.2
Manes.06G035100 Manihot esculenta HOM05D001187 ORTHO05D000993 5.0e-09 63.9 67 53.7
Prupe.7G264600 Prunus persica HOM05D001187 ORTHO05D000993 5.0e-09 63.9 67 52.2
THA.LOC104803543 Tarenaya hassleriana HOM05D001187 ORTHO05D000993 5.0e-09 63.9 67 55.2
AT4G30650 Arabidopsis thaliana HOM05D001187 ORTHO05D000993 6.5e-09 63.5 65 55.4
Ciclev10010088m.g Citrus clementina HOM05D001187 ORTHO05D000993 6.5e-09 63.5 67 56.7
COL.COLO4_18824 Corchorus olitorius HOM05D001187 ORTHO05D000993 6.5e-09 63.5 67 55.2
Gorai.010G113800 Gossypium raimondii HOM05D001187 ORTHO05D000993 6.5e-09 63.5 67 55.2
Ah.14g084620 Amaranthus hybridus HOM05D001187 ORTHO05D000993 8.5e-09 63.2 68 55.9
BcaNung02967 Brassica carinata HOM05D001187 ORTHO05D000993 8.5e-09 63.2 61 57.4
CsaV3_1G029080 Cucumis sativus L. HOM05D001187 ORTHO05D000993 8.5e-09 63.2 67 55.2
Gorai.009G056100 Gossypium raimondii HOM05D001187 ORTHO05D000993 8.5e-09 63.2 67 53.7
BcaNung02750 Brassica carinata HOM05D001187 ORTHO05D000993 1.1e-08 62.8 57 63.2
BcaNung02752 Brassica carinata HOM05D001187 ORTHO05D000993 1.1e-08 62.8 57 63.2
C06p14190 Brassica napus HOM05D001187 ORTHO05D000993 1.1e-08 62.8 61 59.0
C07p58130 Brassica napus HOM05D001187 ORTHO05D000993 1.1e-08 62.8 57 63.2
BolC6t36596H Brassica oleracea HOM05D001187 ORTHO05D000993 1.1e-08 62.8 61 59.0
Eucgr.C00250 Eucalyptus grandis HOM05D001187 ORTHO05D000993 1.1e-08 62.8 67 55.2
Lj6g0000603 Lotus japonicus HOM05D001187 ORTHO05D000993 1.1e-08 62.8 67 49.3
Sed0000656 Sechium edule HOM05D001187 ORTHO05D000993 1.1e-08 62.8 67 52.2
Hund08922 Selenicereus undatus HOM05D001187 ORTHO05D000993 1.1e-08 62.8 72 51.4
TWI34G1018 Tripterygium wilfordii HOM05D001187 ORTHO05D000993 1.1e-08 62.8 67 53.7
CiPaw.16G108100 Carya illinoinensis HOM05D001187 ORTHO05D000993 1.4e-08 62.4 67 55.2
MBI14_g09109_MAGBIO Magnolia biondii HOM05D001187 ORTHO05D000993 1.4e-08 62.4 55 58.2
PGR142G1233 Punica granatum HOM05D001187 ORTHO05D000993 1.4e-08 62.4 67 50.7
AL7G21490 Arabidopsis lyrata HOM05D001187 ORTHO05D000993 1.9e-08 62.0 61 59.0
BcaNung01597 Brassica carinata HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 49.3
A01p19510 Brassica napus HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 49.3
C01p24530 Brassica napus HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 49.3
BolC1t02402H Brassica oleracea HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 49.3
BraA01t01888Z Brassica rapa HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 49.3
Carub.0007s0991 Capsella rubella HOM05D001187 ORTHO05D000993 1.9e-08 62.0 61 57.4
Dinv42842 Davidia involucrata HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 50.7
Dinv43258 Davidia involucrata HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 50.7
Thhalv10000507m.g Eutrema salsugineum HOM05D001187 ORTHO05D000993 1.9e-08 62.0 72 50.0
Sed0013455 Sechium edule HOM05D001187 ORTHO05D000993 1.9e-08 62.0 67 50.7
Aa31LG7G12790 Aethionema arabicum HOM05D001187 ORTHO05D000993 2.5e-08 61.6 67 52.2
AL7G24510 Arabidopsis lyrata HOM05D001187 ORTHO05D000993 2.5e-08 61.6 67 49.3
AT4G28088 Arabidopsis thaliana HOM05D001187 ORTHO05D000993 2.5e-08 61.6 67 49.3
Carub.0007s1268 Capsella rubella HOM05D001187 ORTHO05D000993 2.5e-08 61.6 67 49.3
CARHR235810 Cardamine hirsuta HOM05D001187 ORTHO05D000993 2.5e-08 61.6 67 49.3
ECA236G1127 Erigeron canadensis HOM05D001187 ORTHO05D000993 2.5e-08 61.6 72 50.0
Oeu021309.1 Olea europaea HOM05D001187 ORTHO05D000993 2.5e-08 61.6 65 55.4
Potri.018G105100 Populus trichocarpa HOM05D001187 ORTHO05D000993 2.5e-08 61.6 61 59.0
ClCG02G014410 Citrullus lanatus HOM05D001187 ORTHO05D000993 3.2e-08 61.2 67 49.3
Migut.K00314 Erythranthe guttata HOM05D001187 ORTHO05D000993 3.2e-08 61.2 61 60.7
Sp4g02950 Schrenkiella parvula HOM05D001187 ORTHO05D000993 3.2e-08 61.2 67 50.7
THA.LOC109116851 Tarenaya hassleriana HOM05D001187 ORTHO05D000993 3.2e-08 61.2 67 52.2
vmacro06063 Vaccinium macrocarpon HOM05D001187 ORTHO05D000993 3.2e-08 61.2 74 52.7
BcaC02g08508 Brassica carinata HOM05D001187 ORTHO05D000993 4.2e-08 60.8 67 52.2
C04p53590 Brassica napus HOM05D001187 ORTHO05D000993 4.2e-08 60.8 67 52.2
BolC4t26914H Brassica oleracea HOM05D001187 ORTHO05D000993 4.2e-08 60.8 67 52.2
CSS0032518 Camellia sinensis var. sinensis HOM05D001187 ORTHO05D000993 4.2e-08 60.8 72 50.0
CANSAT11G2186 Cannabis sativa HOM05D001187 ORTHO05D000993 4.2e-08 60.8 61 59.0
Thhalv10027289m.g Eutrema salsugineum HOM05D001187 ORTHO05D000993 4.2e-08 60.8 67 47.8
MD15G1151300 Malus domestica HOM05D001187 ORTHO05D000993 4.2e-08 60.8 67 53.7
Sp7g26050 Schrenkiella parvula HOM05D001187 ORTHO05D000993 4.2e-08 60.8 67 49.3
MELO3C004127.2 Cucumis melo HOM05D001187 ORTHO05D000993 5.5e-08 60.5 67 50.7
CsaV3_2G007590 Cucumis sativus L. HOM05D001187 ORTHO05D000993 5.5e-08 60.5 67 50.7
CSS0016590 Camellia sinensis var. sinensis HOM05D001187 ORTHO05D000993 7.2e-08 60.1 72 50.0
CARHR238530 Cardamine hirsuta HOM05D001187 ORTHO05D000993 7.2e-08 60.1 57 61.4
SalBow1G1204 Salvia bowleyana HOM05D001187 ORTHO05D000993 7.2e-08 60.1 71 54.9
Actinidia23558 Actinidia chinensis HOM05D001187 ORTHO05D000993 9.4e-08 59.7 73 52.1
EL10Ac8g18940 Beta vulgaris HOM05D001187 ORTHO05D000993 9.4e-08 59.7 61 54.1
A04p18350 Brassica napus HOM05D001187 ORTHO05D000993 9.4e-08 59.7 67 50.7
BraA04t17446Z Brassica rapa HOM05D001187 ORTHO05D000993 9.4e-08 59.7 67 50.7
TAR562G0001 Trochodendron aralioides HOM05D001187 ORTHO05D000993 9.4e-08 59.7 69 53.6
Carub.0004s0320 Capsella rubella HOM05D001187 ORTHO05D000993 1.2e-07 59.3 67 50.7
Os09g0558100 Oryza sativa ssp. japonica HOM05D001187 ORTHO05D000993 1.2e-07 59.3 69 50.7
PSO017G6054 Papaver somniferum HOM05D001187 ORTHO05D000993 1.2e-07 59.3 67 55.2
Rhsim03G0258000 Rhododendron simsii HOM05D001187 ORTHO05D000993 1.2e-07 59.3 74 51.4
Ah.09g228820 Amaranthus hybridus HOM05D001187 ORTHO05D000993 2.1e-07 58.5 61 52.5
CARHR118310 Cardamine hirsuta HOM05D001187 ORTHO05D000993 2.1e-07 58.5 67 49.3
Lalb_Chr13g0300801 Lupinus albus HOM05D001187 ORTHO05D000993 2.1e-07 58.5 61 50.8
Oeu026459.1 Olea europaea HOM05D001187 ORTHO05D000993 2.1e-07 58.5 70 51.4
SalBow1G5921 Salvia bowleyana HOM05D001187 ORTHO05D000993 2.1e-07 58.5 61 55.7
Actinidia38666 Actinidia chinensis HOM05D001187 ORTHO05D000993 2.7e-07 58.2 73 50.7
BraA03t15062Z Brassica rapa HOM05D001187 ORTHO05D000993 2.7e-07 58.2 51 66.7
Lsat_1_v5_gn_7_50060 Lactuca sativa HOM05D001187 ORTHO05D000993 3.6e-07 57.8 74 51.4
Ah.14g084630 Amaranthus hybridus HOM05D001187 ORTHO05D000993 6.1e-07 57.0 61 50.8
QL02p093592 Quercus lobata HOM05D001187 ORTHO05D000993 6.1e-07 57.0 57 56.1
SalBow1G7434 Salvia bowleyana HOM05D001187 ORTHO05D000993 7.9e-07 56.6 56 58.9
vmacro06065 Vaccinium macrocarpon HOM05D001187 ORTHO05D000993 7.9e-07 56.6 70 48.6
AL4G14094 Arabidopsis lyrata HOM05D001187 ORTHO05D000993 1.0e-06 56.2 67 47.8
BcaB06g27962 Brassica carinata HOM05D001187 ORTHO05D000993 1.0e-06 56.2 57 57.9
Nitab4.5_0002724g0130 Nicotiana tabacum HOM05D001187 ORTHO05D000993 1.0e-06 56.2 56 58.9
Nitab4.5_0005869g0020 Nicotiana tabacum HOM05D001187 ORTHO05D000993 1.0e-06 56.2 56 58.9
Solyc07g005715.1 Solanum lycopersicum HOM05D001187 ORTHO05D000993 1.0e-06 56.2 56 57.1
Sc08g0009260 Simmondsia chinensis HOM05D001187 ORTHO05D000993 1.4e-06 55.8 67 52.2
Migut.J01366 Erythranthe guttata HOM05D001187 ORTHO05D000993 1.8e-06 55.5 65 50.8
MD15G1151000 Malus domestica HOM05D001187 ORTHO05D000993 1.8e-06 55.5 57 57.9
EL10Ac8g18942 Beta vulgaris HOM05D001187 ORTHO05D000993 2.3e-06 55.1 53 62.3
CSS0015471 Camellia sinensis var. sinensis HOM05D001187 ORTHO05D000993 2.3e-06 55.1 70 48.6
AUR62025339 Chenopodium quinoa HOM05D001187 ORTHO05D000993 2.3e-06 55.1 60 50.0
AUR62028341 Chenopodium quinoa HOM05D001187 ORTHO05D000993 2.3e-06 55.1 60 50.0
AUR62025322 Chenopodium quinoa HOM05D001187 ORTHO05D000993 3.0e-06 54.7 53 60.4
Manes.14G145000 Manihot esculenta HOM05D001187 ORTHO05D000993 3.0e-06 54.7 65 49.2
Actinidia23557 Actinidia chinensis HOM05D001187 ORTHO05D000993 3.9e-06 54.3 70 47.1
AUR62028340 Chenopodium quinoa HOM05D001187 ORTHO05D000993 3.9e-06 54.3 53 58.5
Glyma.02G205102 Glycine max HOM05D001187 ORTHO05D000993 3.9e-06 54.3 95 37.9
Rhsim03G0257800 Rhododendron simsii HOM05D001187 ORTHO05D000993 3.9e-06 54.3 67 47.8
EL10Ac8g18941 Beta vulgaris HOM05D001187 ORTHO05D000993 5.1e-06 53.9 52 63.5
Migut.J01367 Erythranthe guttata HOM05D001187 ORTHO05D000993 5.1e-06 53.9 51 62.7
Lsat_1_v5_gn_8_63740 Lactuca sativa HOM05D001187 ORTHO05D000993 5.1e-06 53.9 56 53.6
Pp3c2_35200 Physcomitrium patens HOM05D001187 ORTHO05D000993 5.1e-06 53.9 50 66.0
ECA236G0008 Erigeron canadensis HOM05D001187 ORTHO05D000993 6.7e-06 53.5 68 45.6


User provided reference genes

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