Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.1e-108 396.0 243 100.0
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 6.2e-100 367.9 243 92.6
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 2.1e-84 316.2 246 85.0
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 9.6e-77 290.8 243 78.2
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 5.5e-64 248.4 242 71.5
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 3.3e-53 212.6 243 63.8
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 1.7e-52 210.3 266 58.6
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 2.2e-52 209.9 268 58.6
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.4e-51 206.5 245 51.8
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 3.1e-51 206.1 262 53.4
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 1.5e-50 203.8 285 54.4
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.0e-50 203.4 245 51.4
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 2.0e-50 203.4 245 51.4
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 5.9e-50 201.8 267 59.6
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 7.7e-50 201.4 258 55.8
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.0e-49 201.1 267 58.4
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 1.7e-49 200.3 243 58.4
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 2.9e-49 199.5 243 61.3
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 8.5e-49 198.0 243 60.5
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 8.5e-49 198.0 247 61.9
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 8.5e-49 198.0 243 63.0
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 1.1e-48 197.6 249 58.6
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 1.9e-48 196.8 258 48.1
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 7.2e-48 194.9 243 51.0
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 9.4e-48 194.5 243 60.5
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 9.4e-48 194.5 243 60.5
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 6.1e-47 191.8 240 61.7
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 8.0e-47 191.4 253 59.3
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.3e-46 189.9 247 58.7
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 3.0e-46 189.5 256 50.4
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 6.7e-46 188.3 247 58.7
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.1e-45 187.6 261 57.5
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 4.4e-45 185.7 266 57.5
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 1.3e-44 184.1 249 57.8
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 1.7e-44 183.7 246 50.0
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 2.2e-44 183.3 252 59.1
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 2.8e-44 183.0 243 59.3
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 2.8e-44 183.0 279 53.4
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 4.8e-44 182.2 262 56.9
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.4e-43 180.6 288 53.1
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 2.4e-43 179.9 243 49.0
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 7.0e-43 178.3 258 56.2
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 9.1e-43 177.9 252 57.9
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.2e-42 177.6 250 47.2
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.2e-42 177.6 296 44.6
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 7.7e-42 174.9 243 56.4
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 5.0e-41 172.2 241 57.3
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 8.5e-41 171.4 231 57.6
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 8.5e-41 171.4 231 57.6
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 1.1e-40 171.0 240 56.2
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 2.5e-40 169.9 242 56.2
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 4.2e-40 169.1 156 67.9
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 7.2e-40 168.3 247 59.5
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 1.6e-39 167.2 257 53.7
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 1.6e-39 167.2 236 58.1
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.6e-39 166.0 232 58.6
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 1.0e-38 164.5 243 57.6
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 1.4e-38 164.1 307 48.9
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 2.3e-38 163.3 234 47.9
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 2.0e-37 160.2 237 54.9
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 1.7e-36 157.1 237 58.6
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 2.8e-36 156.4 231 53.7
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 7.0e-35 151.8 238 42.4
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 1.2e-34 151.0 211 61.6
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.2e-34 151.0 238 41.6
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 2.5e-32 143.3 242 46.7
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 2.5e-32 143.3 242 42.1
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 3.2e-32 142.9 254 50.0
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 3.6e-31 139.4 251 51.0
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 1.8e-30 137.1 251 50.2
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.8e-30 137.1 233 51.5
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 3.7e-28 129.4 234 50.0
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 7.0e-27 125.2 242 46.3
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 7.0e-27 125.2 242 45.9
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 9.1e-27 124.8 249 49.0
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 2.0e-26 123.6 242 44.2
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 2.0e-26 123.6 242 44.2
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 1.0e-25 121.3 242 43.0
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 1.0e-25 121.3 242 43.0
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.9e-24 117.1 236 38.6
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 5.5e-24 115.5 244 41.8
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 2.1e-23 113.6 174 44.8
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 2.8e-23 113.2 227 47.1
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 6.1e-23 112.1 242 43.4
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 5.2e-22 109.0 232 35.8
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 5.2e-22 109.0 245 42.0
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 2.2e-20 103.6 265 33.2
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 3.7e-20 102.8 239 44.8
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 1.1e-19 101.3 242 43.8
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.8e-19 100.5 248 31.5
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 4.1e-19 99.4 236 40.7
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 7.0e-19 98.6 242 43.4
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 4.5e-18 95.9 102 55.9
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 1.1e-16 91.3 211 37.4
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 1.4e-14 84.3 193 38.3
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 1.1e-11 74.7 219 37.4
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 1.7e-09 67.4 57 57.9
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 6.6e-09 65.5 246 25.6
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 1.6e-07 60.8 241 27.0
COL.COLO4_31764 Corchorus olitorius HOM05D007467 ORTHO05D009441 4.7e-07 59.3 179 31.8
CsaV3_6G049090 Cucumis sativus L. HOM05D002166 ORTHO05D002634 4.7e-07 59.3 232 27.6
MELO3C007386.2 Cucumis melo HOM05D002166 ORTHO05D002634 8.0e-07 58.5 236 27.1
Os04g0625000 Oryza sativa ssp. japonica HOM05D002166 ORTHO05D002634 1.8e-06 57.4 159 34.0
Sed0003496 Sechium edule HOM05D002166 ORTHO05D002634 1.8e-06 57.4 206 28.2
SEGI_05627 Sequoiadendron giganteum HOM05D002166 ORTHO05D002634 2.3e-06 57.0 79 48.1
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 8.9e-06 55.1 83 67.5


User provided reference genes

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