Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.8e-31 138.7 71 100.0
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 4.9e-29 130.6 71 95.8
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 3.2e-28 127.9 71 91.5
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 4.6e-27 124.0 71 88.7
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 7.8e-27 123.2 71 87.3
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 1.3e-21 105.9 71 69.0
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 1.1e-20 102.8 71 76.1
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 1.9e-20 102.1 71 73.2
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 3.2e-20 101.3 66 75.8
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 2.7e-19 98.2 71 67.6
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 2.7e-19 98.2 65 73.8
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 4.6e-19 97.4 71 69.0
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 4.6e-19 97.4 66 74.2
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 6.0e-19 97.1 70 70.0
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 1.0e-18 96.3 71 71.8
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 1.3e-18 95.9 69 69.6
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 1.3e-18 95.9 71 64.8
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 2.3e-18 95.1 71 66.2
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 2.3e-18 95.1 70 65.7
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 3.0e-18 94.7 66 71.2
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.1e-18 94.0 71 67.6
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 5.1e-18 94.0 71 69.0
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 5.1e-18 94.0 71 66.2
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 8.6e-18 93.2 71 66.2
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 8.6e-18 93.2 71 64.8
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 1.1e-17 92.8 71 63.4
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 1.5e-17 92.4 71 63.4
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 7.3e-17 90.1 71 62.0
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 7.3e-17 90.1 71 63.4
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 9.5e-17 89.7 71 62.0
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 9.5e-17 89.7 71 63.4
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 1.6e-16 89.0 71 62.0
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 1.6e-16 89.0 70 62.9
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 2.1e-16 88.6 66 65.2
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 2.1e-16 88.6 64 64.1
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 3.6e-16 87.8 71 60.6
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 3.6e-16 87.8 65 64.6
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 3.6e-16 87.8 71 60.6
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 3.6e-16 87.8 67 62.7
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 3.6e-16 87.8 65 64.6
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 4.7e-16 87.4 71 60.6
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 4.7e-16 87.4 70 62.9
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 6.2e-16 87.0 63 68.3
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 8.1e-16 86.7 67 62.7
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 8.1e-16 86.7 71 60.6
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 8.1e-16 86.7 71 60.6
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 1.1e-15 86.3 63 65.1
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 1.4e-15 85.9 71 57.7
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 1.4e-15 85.9 71 59.2
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 1.4e-15 85.9 71 62.0
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 1.4e-15 85.9 70 60.0
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 1.8e-15 85.5 70 61.4
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 2.3e-15 85.1 71 57.7
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.3e-15 85.1 71 59.2
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 2.3e-15 85.1 71 59.2
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 2.3e-15 85.1 70 60.0
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 2.3e-15 85.1 65 63.1
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 4.0e-15 84.3 70 60.0
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 8.9e-15 83.2 70 58.6
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 8.9e-15 83.2 70 58.6
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 8.9e-15 83.2 70 58.6
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 8.9e-15 83.2 71 59.2
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 1.2e-14 82.8 71 59.2
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 1.5e-14 82.4 70 62.9
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.5e-14 82.4 71 57.7
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 2.0e-14 82.0 71 57.7
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 2.6e-14 81.6 70 57.1
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 2.6e-14 81.6 69 59.4
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 3.4e-14 81.3 71 57.7
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 4.4e-14 80.9 70 55.7
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 4.4e-14 80.9 66 60.6
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 4.4e-14 80.9 72 63.9
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 5.8e-14 80.5 67 56.7
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 5.8e-14 80.5 70 54.3
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 5.8e-14 80.5 66 60.6
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 7.5e-14 80.1 71 57.7
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 7.5e-14 80.1 71 57.7
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 7.5e-14 80.1 71 56.3
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 9.9e-14 79.7 71 57.7
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 9.9e-14 79.7 71 59.2
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 9.9e-14 79.7 71 59.2
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 9.9e-14 79.7 86 51.2
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 9.9e-14 79.7 66 57.6
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.3e-13 79.3 71 57.7
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 1.7e-13 79.0 71 57.7
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 2.2e-13 78.6 71 56.3
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 2.2e-13 78.6 71 57.7
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 2.2e-13 78.6 71 57.7
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 2.2e-13 78.6 71 54.9
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 3.7e-13 77.8 71 57.7
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 3.7e-13 77.8 61 62.3
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 6.4e-13 77.0 97 46.4
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 8.3e-13 76.6 71 56.3
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 8.3e-13 76.6 71 54.9
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 1.4e-12 75.9 71 54.9
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 1.4e-12 75.9 70 52.9
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 3.2e-12 74.7 64 59.4
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 4.1e-12 74.3 89 46.1
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 5.4e-12 73.9 71 53.5
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 5.4e-12 73.9 71 53.5
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 5.4e-12 73.9 71 53.5
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 7.1e-12 73.6 69 52.2
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 9.2e-12 73.2 71 53.5
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.5e-11 71.2 56 67.9
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 6.0e-11 70.5 72 56.9
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 2.3e-10 68.6 45 71.1
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.9e-10 67.8 41 75.6
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 3.9e-10 67.8 66 48.5
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 6.6e-10 67.0 42 73.8
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.1e-09 66.2 42 76.2
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.5e-09 65.1 71 52.1
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 4.3e-09 64.3 105 40.0
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 7.3e-09 63.5 58 53.4
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 9.5e-09 63.2 61 54.1
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 1.6e-08 62.4 42 69.0
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 2.1e-08 62.0 43 65.1
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.1e-08 62.0 52 59.6
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 4.7e-08 60.8 41 68.3
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 8.1e-08 60.1 51 58.8
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 2.4e-07 58.5 41 68.3
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 3.1e-07 58.2 58 48.3
Eucgr.E02459 Eucalyptus grandis HOM05D006482 ORTHO05D008149 4.0e-07 57.8 65 44.6
Zm00001eb160720 Zea mays HOM05D006482 ORTHO05D008149 8.9e-07 56.6 73 45.2
Os01g0589100 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 2.0e-06 55.5 73 42.5


User provided reference genes

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