Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002715g0030 Nicotiana tabacum HOM05D003380 ORTHO05D022189 4.1e-128 461.5 243 100.0
Nitab4.5_0000368g0420 Nicotiana tabacum HOM05D003380 ORTHO05D022189 1.0e-118 430.3 244 95.1
PGSC0003DMG400042943 Solanum tuberosum HOM05D003380 ORTHO05D022189 2.6e-50 203.0 241 49.0
PGSC0003DMG400038195 Solanum tuberosum HOM05D003380 ORTHO05D022189 2.9e-49 199.5 203 55.2
CAN.G1273.9 Capsicum annuum HOM05D003380 ORTHO05D022189 1.1e-40 171.0 159 58.5
Prupe.1G065200 Prunus persica HOM05D003380 ORTHO05D004232 6.3e-36 155.2 208 46.2
MD13G1234400 Malus domestica HOM05D003380 ORTHO05D004232 1.4e-35 154.1 208 45.2
GSVIVG01032253001 Vitis vinifera HOM05D003380 ORTHO05D004232 1.8e-35 153.7 208 44.7
Dinv12605 Davidia involucrata HOM05D003380 ORTHO05D004232 3.1e-35 152.9 221 42.5
Eucgr.C02133 Eucalyptus grandis HOM05D003380 ORTHO05D004232 7.0e-35 151.8 224 43.3
HanXRQChr03g0067311 Helianthus annuus HOM05D003380 ORTHO05D004232 7.0e-35 151.8 207 45.4
Dinv26471 Davidia involucrata HOM05D003380 ORTHO05D004232 9.1e-35 151.4 225 43.1
Actinidia38523 Actinidia chinensis HOM05D003380 ORTHO05D004232 1.2e-34 151.0 208 44.2
MSTRG.10467 Avicennia marina HOM05D003380 ORTHO05D004232 1.6e-34 150.6 223 42.2
Cc00_g00190 Coffea canephora HOM05D003380 ORTHO05D004232 1.6e-34 150.6 221 43.0
CiPaw.07G209900 Carya illinoinensis HOM05D003380 ORTHO05D004232 2.7e-34 149.8 211 44.5
HanXRQChr03g0081271 Helianthus annuus HOM05D003380 ORTHO05D004232 3.5e-34 149.4 208 44.7
Nn1g03129 Nelumbo nucifera HOM05D003380 ORTHO05D004232 3.5e-34 149.4 208 45.2
Hund03262 Selenicereus undatus HOM05D003380 ORTHO05D004232 3.5e-34 149.4 219 44.3
MD16G1239000 Malus domestica HOM05D003380 ORTHO05D004232 4.5e-34 149.1 208 44.2
Atru.chr13.1615 Acer truncatum HOM05D003380 ORTHO05D004232 5.9e-34 148.7 208 44.2
Cfa010143 Carpinus fangiana HOM05D003380 ORTHO05D004232 7.7e-34 148.3 208 44.7
Oeu036948.2 Olea europaea HOM05D003380 ORTHO05D004232 1.0e-33 147.9 208 44.2
Atru.chr7.2666 Acer truncatum HOM05D003380 ORTHO05D004232 1.3e-33 147.5 208 43.8
Ciclev10009349m.g Citrus clementina HOM05D003380 ORTHO05D004232 1.3e-33 147.5 208 44.2
ECA240G0102 Erigeron canadensis HOM05D003380 ORTHO05D004232 1.3e-33 147.5 208 44.2
Lj4A319G22 Lonicera japonica HOM05D003380 ORTHO05D004232 1.3e-33 147.5 219 42.5
Nn3g19887 Nelumbo nucifera HOM05D003380 ORTHO05D004232 1.3e-33 147.5 208 43.3
PSO170G5091 Papaver somniferum HOM05D003380 ORTHO05D004232 1.3e-33 147.5 219 42.9
PSO210G2204 Papaver somniferum HOM05D003380 ORTHO05D004232 1.3e-33 147.5 219 42.9
Sed0022704 Sechium edule HOM05D003380 ORTHO05D004232 1.3e-33 147.5 208 43.8
THA.LOC104819924 Tarenaya hassleriana HOM05D003380 ORTHO05D004232 1.3e-33 147.5 208 44.7
Atru.chr7.2690 Acer truncatum HOM05D003380 ORTHO05D004232 1.7e-33 147.1 208 43.8
Actinidia02482 Actinidia chinensis HOM05D003380 ORTHO05D004232 1.7e-33 147.1 208 44.2
ClCG08G012530 Citrullus lanatus HOM05D003380 ORTHO05D004232 1.7e-33 147.1 208 43.8
RhsimUnG0051400 Rhododendron simsii HOM05D003380 ORTHO05D004232 1.7e-33 147.1 208 44.7
Rhsim03G0268700 Rhododendron simsii HOM05D003380 ORTHO05D004232 2.2e-33 146.7 208 44.7
GSVIVG01035567001 Vitis vinifera HOM05D003380 ORTHO05D004232 2.2e-33 146.7 207 44.0
CiPaw.08G021300 Carya illinoinensis HOM05D003380 ORTHO05D004232 2.9e-33 146.4 208 44.2
CARHR239170 Cardamine hirsuta HOM05D003380 ORTHO05D004232 3.8e-33 146.0 208 45.2
Sed0024231 Sechium edule HOM05D003380 ORTHO05D004232 3.8e-33 146.0 211 42.7
Hund19388 Selenicereus undatus HOM05D003380 ORTHO05D004232 3.8e-33 146.0 208 44.2
COL.COLO4_18628 Corchorus olitorius HOM05D003380 ORTHO05D004232 5.0e-33 145.6 208 43.3
Migut.L01915 Erythranthe guttata HOM05D003380 ORTHO05D004232 5.0e-33 145.6 222 42.8
FvH4_2g36480 Fragaria vesca HOM05D003380 ORTHO05D004232 5.0e-33 145.6 208 44.2
FAN15G0754 Fragaria x ananassa HOM05D003380 ORTHO05D004232 5.0e-33 145.6 208 44.2
FAN20G0682 Fragaria x ananassa HOM05D003380 ORTHO05D004232 5.0e-33 145.6 208 44.2
Duzib150G0262 Durio zibethinus HOM05D003380 ORTHO05D004232 6.5e-33 145.2 208 43.8
TAR383G1016 Trochodendron aralioides HOM05D003380 ORTHO05D004232 6.5e-33 145.2 208 43.8
Cfa013309 Carpinus fangiana HOM05D003380 ORTHO05D004232 8.5e-33 144.8 219 42.5
Manes.03G001100 Manihot esculenta HOM05D003380 ORTHO05D004232 8.5e-33 144.8 208 43.8
TWI34G1105 Tripterygium wilfordii HOM05D003380 ORTHO05D004232 8.5e-33 144.8 219 42.5
Gohir.D13G185700 Gossypium hirsutum HOM05D003380 ORTHO05D004232 1.1e-32 144.4 211 43.1
Gorai.013G211700 Gossypium raimondii HOM05D003380 ORTHO05D004232 1.1e-32 144.4 211 43.1
Peaxi162Scf00320g00122 Petunia axillaris HOM05D003380 ORTHO05D004232 1.1e-32 144.4 220 41.8
Thecc.09G002600 Theobroma cacao HOM05D003380 ORTHO05D004232 1.1e-32 144.4 208 43.3
Aa31LG2G19070 Aethionema arabicum HOM05D003380 ORTHO05D004232 1.5e-32 144.1 208 44.7
BcaC01g01103 Brassica carinata HOM05D003380 ORTHO05D004232 1.5e-32 144.1 208 45.2
C03p88100 Brassica napus HOM05D003380 ORTHO05D004232 1.5e-32 144.1 208 45.2
Migut.J00835 Erythranthe guttata HOM05D003380 ORTHO05D004232 1.5e-32 144.1 218 42.7
Lsat_1_v5_gn_5_56460 Lactuca sativa HOM05D003380 ORTHO05D004232 1.5e-32 144.1 208 43.8
PGR044G1928 Punica granatum HOM05D003380 ORTHO05D004232 1.5e-32 144.1 208 43.3
Rhsim01G0218400 Rhododendron simsii HOM05D003380 ORTHO05D004232 1.5e-32 144.1 208 44.2
THA.LOC104803586 Tarenaya hassleriana HOM05D003380 ORTHO05D004232 1.5e-32 144.1 208 44.2
vmacro15777 Vaccinium macrocarpon HOM05D003380 ORTHO05D004232 1.5e-32 144.1 222 43.2
AL7G20780 Arabidopsis lyrata HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
BcaC09g51907 Brassica carinata HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
BcaNung05317 Brassica carinata HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
A01p07000 Brassica napus HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
A08p18700 Brassica napus HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
C01p07730 Brassica napus HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
BolC1t00756H Brassica oleracea HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
BraA01t00651Z Brassica rapa HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
BraA03t15102Z Brassica rapa HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
Carub.0007s0926 Capsella rubella HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
Thhalv10026126m.g Eutrema salsugineum HOM05D003380 ORTHO05D004232 1.9e-32 143.7 208 44.7
A03p60610 Brassica napus HOM05D003380 ORTHO05D004232 2.5e-32 143.3 208 44.2
Potri.006G077900 Populus trichocarpa HOM05D003380 ORTHO05D004232 2.5e-32 143.3 208 43.8
TAR383G0138 Trochodendron aralioides HOM05D003380 ORTHO05D004232 2.5e-32 143.3 208 43.3
AT4G31300 Arabidopsis thaliana HOM05D003380 ORTHO05D004232 3.2e-32 142.9 208 44.7
Cpa.g.sc148.3 Carica papaya HOM05D003380 ORTHO05D004232 3.2e-32 142.9 208 43.8
Sp7g29150 Schrenkiella parvula HOM05D003380 ORTHO05D004232 3.2e-32 142.9 208 44.7
CANSAT25G3289 Cannabis sativa HOM05D003380 ORTHO05D004232 4.2e-32 142.5 208 42.3
Duzib168G0804 Durio zibethinus HOM05D003380 ORTHO05D004232 4.2e-32 142.5 208 42.8
Potri.018G145900 Populus trichocarpa HOM05D003380 ORTHO05D004232 4.2e-32 142.5 223 42.6
MD08G1124600 Malus domestica HOM05D003380 ORTHO05D004232 5.5e-32 142.1 222 41.9
Sc06g0001250 Simmondsia chinensis HOM05D003380 ORTHO05D004232 5.5e-32 142.1 219 42.0
unitig_578.g16397 Utricularia gibba HOM05D003380 ORTHO05D004232 5.5e-32 142.1 208 43.3
Ah.09g234230 Amaranthus hybridus HOM05D003380 ORTHO05D004232 7.2e-32 141.7 208 43.3
C07p58510 Brassica napus HOM05D003380 ORTHO05D004232 7.2e-32 141.7 208 44.2
Gohir.D05G068600 Gossypium hirsutum HOM05D003380 ORTHO05D004232 7.2e-32 141.7 208 42.8
Gorai.009G069600 Gossypium raimondii HOM05D003380 ORTHO05D004232 7.2e-32 141.7 208 42.8
Hma1.2p1_0443F.1_g154000 Hydrangea macrophylla HOM05D003380 ORTHO05D004232 7.2e-32 141.7 208 43.3
Lalb_Chr08g0243471 Lupinus albus HOM05D003380 ORTHO05D004232 7.2e-32 141.7 208 42.8
Sabra06G0058900 Salix brachista HOM05D003380 ORTHO05D004232 7.2e-32 141.7 208 43.3
Sabra18G0120300 Salix brachista HOM05D003380 ORTHO05D004232 7.2e-32 141.7 223 42.2
BolC3t21119H Brassica oleracea HOM05D003380 ORTHO05D004232 9.4e-32 141.4 208 44.2
BraA08t33831Z Brassica rapa HOM05D003380 ORTHO05D004232 9.4e-32 141.4 208 44.2
Aqoxy7G02672 Aquilegia oxysepala HOM05D003380 ORTHO05D004232 1.2e-31 141.0 208 41.3
RcHm_v2.0_Chr6g0305401 Rosa chinensis HOM05D003380 ORTHO05D004232 1.2e-31 141.0 208 42.8
CsaV3_2G031230 Cucumis sativus L. HOM05D003380 ORTHO05D004232 1.6e-31 140.6 208 43.3
BolC7t46306H Brassica oleracea HOM05D003380 ORTHO05D004232 2.1e-31 140.2 217 43.3
Gohir.A05G066200 Gossypium hirsutum HOM05D003380 ORTHO05D004232 2.1e-31 140.2 208 42.3
Gohir.A13G181700 Gossypium hirsutum HOM05D003380 ORTHO05D004232 2.1e-31 140.2 208 42.8
EL10Ac2g03687 Beta vulgaris HOM05D003380 ORTHO05D004232 3.6e-31 139.4 205 43.9
BcaB03g12688 Brassica carinata HOM05D003380 ORTHO05D004232 3.6e-31 139.4 208 44.2
Lalb_Chr23g0269261 Lupinus albus HOM05D003380 ORTHO05D004232 3.6e-31 139.4 208 42.8
MBI13_g34299_MAGBIO Magnolia biondii HOM05D003380 ORTHO05D004232 3.6e-31 139.4 230 39.1
MD15G1103300 Malus domestica HOM05D003380 ORTHO05D004232 3.6e-31 139.4 220 41.4
Nitab4.5_0007423g0010 Nicotiana tabacum HOM05D003380 ORTHO05D004232 3.6e-31 139.4 220 41.4
Prupe.1G456200 Prunus persica HOM05D003380 ORTHO05D004232 3.6e-31 139.4 220 41.4
CSS0000176 Camellia sinensis var. sinensis HOM05D003380 ORTHO05D004232 6.1e-31 138.7 208 42.8
AUR62020647 Chenopodium quinoa HOM05D003380 ORTHO05D004232 6.1e-31 138.7 207 43.5
SGA_v2.0_scaffold450G51802 Striga asiatica HOM05D003380 ORTHO05D004232 6.1e-31 138.7 220 40.9
Psat5g024560 Pisum sativum HOM05D003380 ORTHO05D004232 8.0e-31 138.3 208 42.3
TWI63G0177 Tripterygium wilfordii HOM05D003380 ORTHO05D004232 8.0e-31 138.3 208 41.3
CAN.G106.10 Capsicum annuum HOM05D003380 ORTHO05D004232 1.4e-30 137.5 218 40.8
Glyma.06G078500 Glycine max HOM05D003380 ORTHO05D004232 1.4e-30 137.5 217 40.6
AUR62038728 Chenopodium quinoa HOM05D003380 ORTHO05D004232 1.8e-30 137.1 207 43.0
Haze_21791 Corylus avellana HOM05D003380 ORTHO05D004232 1.8e-30 137.1 236 38.6
TPR.G12492 Trifolium pratense HOM05D003380 ORTHO05D004232 1.8e-30 137.1 208 41.8
Medtr3g109210 Medicago truncatula HOM05D003380 ORTHO05D004232 2.3e-30 136.7 208 42.3
Os06g0139900 Oryza sativa ssp. japonica HOM05D003380 ORTHO05D004232 2.3e-30 136.7 219 39.7
arahy.Tifrunner.gnm1.ann1.21Q806 Arachis hypogaea HOM05D003380 ORTHO05D004232 3.0e-30 136.3 208 41.3
arahy.Tifrunner.gnm1.ann1.AGKE2S Arachis hypogaea HOM05D003380 ORTHO05D004232 3.0e-30 136.3 208 41.3
CAN.G228.7 Capsicum annuum HOM05D003380 ORTHO05D004232 3.0e-30 136.3 219 40.2
FAN03G3318 Fragaria x ananassa HOM05D003380 ORTHO05D004232 3.0e-30 136.3 208 41.3
PGSC0003DMG400009772 Solanum tuberosum HOM05D003380 ORTHO05D004232 4.0e-30 136.0 219 40.2
VMungo1309G0072 Vigna mungo HOM05D003380 ORTHO05D004232 4.0e-30 136.0 217 40.1
Sopen07g005910 Solanum pennellii HOM05D003380 ORTHO05D004232 5.2e-30 135.6 219 39.7
Glyma.04G077400 Glycine max HOM05D003380 ORTHO05D004232 6.8e-30 135.2 217 39.6
Sabra18G0127800 Salix brachista HOM05D003380 ORTHO05D004232 6.8e-30 135.2 227 40.5
Solyc07g016200.3 Solanum lycopersicum HOM05D003380 ORTHO05D004232 6.8e-30 135.2 219 39.7
SGA_v2.0_scaffold21G09610 Striga asiatica HOM05D003380 ORTHO05D004232 6.8e-30 135.2 240 38.8
HPP92_004718 Vanilla planifolia HOM05D003380 ORTHO05D004232 8.8e-30 134.8 219 39.7
Lj1g0002632 Lotus japonicus HOM05D003380 ORTHO05D004232 1.5e-29 134.0 217 40.1
Phvul.009G103400 Phaseolus vulgaris HOM05D003380 ORTHO05D004232 1.5e-29 134.0 208 40.4
PGSC0003DMG400013685 Solanum tuberosum HOM05D003380 ORTHO05D004232 1.5e-29 134.0 217 40.1
Os02g0770000 Oryza sativa ssp. japonica HOM05D003380 ORTHO05D004232 2.0e-29 133.7 219 39.3
ATR0626G170 Amborella trichopoda HOM05D003380 ORTHO05D004232 4.4e-29 132.5 208 40.4
Nitab4.5_0000404g0220 Nicotiana tabacum HOM05D003380 ORTHO05D004232 5.7e-29 132.1 220 40.0
Zm00001eb270240 Zea mays HOM05D003380 ORTHO05D004232 5.7e-29 132.1 208 40.4
Zm00001eb377530 Zea mays HOM05D003380 ORTHO05D004232 7.5e-29 131.7 219 38.8
Nitab4.5_0001535g0020 Nicotiana tabacum HOM05D003380 ORTHO05D004232 9.8e-29 131.3 221 40.3
TAR636G3035 Trochodendron aralioides HOM05D003380 ORTHO05D004232 9.8e-29 131.3 179 44.7
BcaNung01533 Brassica carinata HOM05D003380 ORTHO05D004232 4.8e-28 129.0 168 47.6
FAN06G1260 Fragaria x ananassa HOM05D003380 ORTHO05D004232 6.3e-28 128.6 206 39.8
FAN06G5002 Fragaria x ananassa HOM05D003380 ORTHO05D004232 6.3e-28 128.6 206 39.8
CAN.G1273.13 Capsicum annuum HOM05D003380 ORTHO05D004232 1.8e-27 127.1 124 54.8
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 2.4e-27 126.7 189 42.9
Haze_23534 Corylus avellana HOM05D004783 ORTHO05D005581 2.4e-27 126.7 180 43.9
CDE04G3274 Ceratophyllum demersum HOM05D003380 ORTHO05D004232 7.0e-27 125.2 168 44.6
Ca_15639_v3 Cicer arietinum L. HOM05D003380 ORTHO05D004232 2.7e-26 123.2 201 40.3
SalBow6G4635 Salvia bowleyana HOM05D003380 ORTHO05D004232 4.5e-26 122.5 271 35.1
Dinv37493 Davidia involucrata HOM05D003380 ORTHO05D004232 2.3e-25 120.2 165 43.6
QL12p025844 Quercus lobata HOM05D003380 ORTHO05D004232 2.9e-25 119.8 282 32.3
Oeu021030.1 Olea europaea HOM05D003380 ORTHO05D004232 6.6e-25 118.6 282 34.0
Mapoly0016s0041 Marchantia polymorpha HOM05D003380 ORTHO05D004232 5.5e-24 115.5 207 37.2
AagrBONN_evm.TU.Sc2ySwM_228.613 Anthoceros agrestis HOM05D003380 ORTHO05D004232 1.2e-23 114.4 207 38.2
Pp3c18_17380 Physcomitrium patens HOM05D003380 ORTHO05D004232 8.0e-23 111.7 205 37.1
Nitab4.5_0000899g0140 Nicotiana tabacum HOM05D003380 ORTHO05D004232 1.2e-21 107.8 221 37.6
MELO3C011172.2 Cucumis melo HOM05D003380 ORTHO05D004232 1.5e-21 107.5 159 41.5
SMO117G0031 Selaginella moellendorffii HOM05D003380 ORTHO05D004232 2.6e-21 106.7 201 34.8
DCAR_000674 Daucus carota HOM05D003380 ORTHO05D004232 1.7e-20 104.0 111 50.5
PGSC0003DMG400037137 Solanum tuberosum HOM05D003380 ORTHO05D022189 7.0e-19 98.6 128 47.7
Cre06.g279000 Chlamydomonas reinhardtii HOM05D003380 ORTHO05D004232 2.0e-18 97.1 201 33.8
FvH4_7g10810 Fragaria vesca HOM05D003380 ORTHO05D004232 2.0e-18 97.1 208 34.6
Nitab4.5_0000749g0120 Nicotiana tabacum HOM05D003380 ORTHO05D004232 2.0e-18 97.1 167 38.9
Actinidia31878 Actinidia chinensis HOM05D003380 ORTHO05D004232 2.7e-18 96.7 137 43.1
Lj6C279G2 Lonicera japonica HOM05D003380 ORTHO05D004232 3.5e-18 96.3 242 31.8
Sopen05g027780 Solanum pennellii HOM05D003380 ORTHO05D004232 4.5e-18 95.9 187 34.2
CBR_g55787 Chara braunii HOM05D003380 ORTHO05D004232 5.0e-17 92.4 207 30.9
Lj6A275T63 Lonicera japonica HOM05D003380 ORTHO05D004232 1.5e-16 90.9 140 40.7
Cre12.g531100 Chlamydomonas reinhardtii HOM05D003380 ORTHO05D004232 1.2e-15 87.8 194 29.9
MCO16G567 Micromonas commoda HOM05D003380 ORTHO05D004232 6.1e-15 85.5 212 29.2
PRCOL_00005615 Prasinoderma coloniale HOM05D003380 ORTHO05D004232 3.1e-14 83.2 210 30.5
SEGI_36081 Sequoiadendron giganteum HOM05D003380 ORTHO05D004232 3.1e-14 83.2 136 39.0
PRCOL_00006052 Prasinoderma coloniale HOM05D003380 ORTHO05D004232 1.5e-13 80.9 201 31.3
Haze_27561 Corylus avellana HOM05D003380 ORTHO05D004232 1.3e-12 77.8 181 28.2
FAN01G0072 Fragaria x ananassa HOM05D003380 ORTHO05D004232 2.0e-10 70.5 64 51.6
Atru.chr1.909 Acer truncatum HOM05D003380 ORTHO05D004232 1.5e-08 64.3 94 43.6
Lj6A275T62 Lonicera japonica HOM05D003380 ORTHO05D004232 1.5e-08 64.3 73 47.9
Hma1.2p1_0263F.1_g105450 Hydrangea macrophylla HOM05D003380 ORTHO05D004232 7.3e-08 62.0 92 43.5
DCAR_004564 Daucus carota HOM05D003380 ORTHO05D004232 3.6e-07 59.7 201 28.4


User provided reference genes

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