Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 9.6e-80 300.1 147 100.0
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 7.4e-72 273.9 143 93.0
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 3.3e-56 221.9 154 71.4
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 4.8e-55 218.0 154 69.5
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 1.4e-54 216.5 154 70.1
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 1.5e-35 153.3 110 68.2
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 2.1e-34 149.4 154 53.2
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 2.6e-32 142.5 156 51.3
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 4.8e-31 138.3 150 53.3
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 1.1e-30 137.1 154 50.0
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 2.4e-30 136.0 154 46.8
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 6.5e-28 127.9 163 46.0
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 1.1e-27 127.1 155 47.7
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 5.5e-27 124.8 163 46.0
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 4.7e-26 121.7 156 47.4
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 6.1e-26 121.3 155 41.3
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.0e-25 120.6 155 45.8
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 1.8e-25 119.8 155 46.5
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 2.3e-25 119.4 151 47.0
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 4.0e-25 118.6 155 44.5
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 4.0e-25 118.6 155 44.5
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 5.2e-25 118.2 154 45.5
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 8.8e-25 117.5 114 55.3
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 3.4e-24 115.5 151 45.0
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 7.5e-24 114.4 159 47.2
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 1.3e-23 113.6 156 44.2
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 2.2e-23 112.8 118 52.5
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 6.3e-23 111.3 160 43.8
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 1.1e-22 110.5 156 41.0
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 3.1e-22 109.0 167 42.5
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 3.1e-22 109.0 153 43.8
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 2.7e-21 105.9 162 40.7
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 7.7e-21 104.4 181 38.1
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 7.7e-21 104.4 179 38.0
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 1.7e-20 103.2 183 38.3
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 3.8e-20 102.1 153 40.5
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 1.9e-19 99.8 160 41.9
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 7.2e-19 97.8 150 42.7
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.6e-18 96.7 151 42.4
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 3.6e-18 95.5 159 37.1
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 4.7e-18 95.1 149 44.3
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 6.1e-18 94.7 125 46.4
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 1.0e-17 94.0 162 38.9
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 2.3e-17 92.8 153 41.8
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 4.0e-17 92.0 149 42.3
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 6.8e-17 91.3 130 46.2
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 8.9e-17 90.9 155 39.4
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 1.5e-16 90.1 150 42.0
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 2.0e-16 89.7 159 35.8
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 4.4e-16 88.6 159 36.5
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 7.5e-16 87.8 146 43.2
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 1.3e-15 87.0 151 37.1
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 1.3e-15 87.0 136 41.9
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 2.2e-15 86.3 151 37.1
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 1.1e-14 84.0 156 35.3
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 5.4e-14 81.6 152 35.5
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 7.0e-14 81.3 155 36.8
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 1.6e-13 80.1 174 35.6
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 1.6e-13 80.1 155 35.5
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 1.6e-13 80.1 184 33.2
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 3.5e-13 79.0 167 34.1
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 3.5e-13 79.0 159 35.2
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 3.5e-13 79.0 158 35.4
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 4.5e-13 78.6 155 36.1
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 1.3e-12 77.0 159 34.6
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 1.7e-12 76.6 74 52.7
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 5.0e-12 75.1 155 34.8
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 1.5e-11 73.6 174 35.6
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 2.5e-11 72.8 159 32.7
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 3.3e-11 72.4 73 50.7
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 2.8e-10 69.3 95 40.0
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 8.0e-10 67.8 77 41.6
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 1.4e-09 67.0 141 33.3
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 6.8e-09 64.7 147 32.7
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 8.9e-09 64.3 151 36.4
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 1.2e-08 63.9 155 32.9
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 5.8e-08 61.6 136 31.6
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 1.7e-07 60.1 132 31.1
Lalb_Chr17g0347071 Lupinus albus HOM05D007902 ORTHO05D009839 2.9e-07 59.3 89 36.0
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 1.1e-06 57.4 157 31.2


User provided reference genes

Program Settings