Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.6e-70 268.5 132 100.0
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.9e-66 256.1 132 93.9
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.4e-66 254.6 132 93.2
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-65 252.3 132 92.4
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.8e-65 250.8 132 93.2
Nitab4.5_0004469g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.8e-65 250.8 132 92.4
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.6e-64 247.7 132 90.9
Nitab4.5_0002210g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.1e-62 242.7 132 91.7
Nitab4.5_0026777g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.1e-62 240.7 132 90.9
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.1e-61 238.8 132 89.4
Nitab4.5_0004968g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.0e-61 238.4 132 87.9
Nitab4.5_0000197g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.2e-61 238.0 132 89.4
Nitab4.5_0000520g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.0e-61 237.3 130 90.0
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.9e-59 231.5 132 87.9
Nitab4.5_0000127g0130 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-58 230.3 132 86.4
Nitab4.5_0005327g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.1e-57 226.1 132 84.8
Nitab4.5_0009338g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.1e-57 226.1 127 86.6
Nitab4.5_0006834g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.9e-55 219.5 131 84.7
Nitab4.5_0001333g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.3e-55 217.6 132 84.1
Nitab4.5_0000686g0200 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.9e-53 211.1 132 81.1
Nitab4.5_0003987g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.5e-52 208.4 122 82.0
Nitab4.5_0001507g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.3e-47 191.8 132 72.7
Nitab4.5_0013419g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.5e-44 183.3 110 80.9
Nitab4.5_0006018g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.4e-43 177.6 132 72.0
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.1e-34 147.9 107 64.5
Nitab4.5_0000485g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.0e-33 144.8 87 78.2
Nitab4.5_0001650g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.7e-31 137.5 87 77.0
Nitab4.5_0007824g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.4e-28 129.0 76 84.2
Nitab4.5_0002145g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.5e-27 124.8 68 89.7
Nitab4.5_0013343g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.5e-27 124.4 68 89.7
Nitab4.5_0001162g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.2e-26 122.1 80 71.2
Nitab4.5_0003998g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-25 119.4 107 57.0
Nitab4.5_0000023g0750 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.0e-24 117.5 114 56.1
Nitab4.5_0008256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.3e-23 112.1 88 62.5
Nitab4.5_0000620g0250 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.4e-23 111.3 68 82.4
Nitab4.5_0004704g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.3e-22 110.5 105 54.3
Nitab4.5_0009681g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.3e-22 110.5 67 82.1
Nitab4.5_0003780g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.7e-22 110.2 62 88.7
Nitab4.5_0000144g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.5e-20 103.6 67 79.1
Nitab4.5_0001772g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-20 101.7 87 59.8
Nitab4.5_0007325g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.4e-18 94.4 77 61.0
Nitab4.5_0004340g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-17 92.8 87 55.2
Nitab4.5_0000779g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.7e-17 92.0 75 61.3
Nitab4.5_0004758g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.7e-17 92.0 68 66.2
Nitab4.5_0009386g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.9e-16 89.0 80 53.8
Nitab4.5_0001151g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.6e-15 86.3 68 61.8
Nitab4.5_0004670g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.8e-14 82.8 86 52.3
Nitab4.5_0002330g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.2e-14 81.3 53 75.5
Nitab4.5_0002628g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-13 80.9 102 46.1
Nitab4.5_0001474g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.9e-13 78.2 62 69.4
Nitab4.5_0006241g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-12 77.4 132 37.9
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.0e-12 76.6 106 43.4
Nitab4.5_0004779g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.7e-11 73.6 68 60.3
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.2e-11 73.2 106 41.5
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.5e-11 71.6 106 41.5
Nitab4.5_0000216g0350 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.9e-10 70.1 68 54.4
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-10 70.1 100 40.0
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-10 70.1 100 40.0
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-10 70.1 100 40.0
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-10 69.7 100 40.0
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 4.2e-10 68.9 106 40.6
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.2e-10 68.2 125 32.8
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 7.2e-10 68.2 102 39.2
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-09 67.4 98 39.8
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.2e-09 67.4 123 35.8
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.6e-09 67.0 106 39.6
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 2.1e-09 66.6 100 36.0
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-09 66.6 101 39.6
Nitab4.5_0009261g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.7e-09 66.2 120 33.3
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-09 65.5 135 31.9
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 4.7e-09 65.5 97 36.1
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 4.7e-09 65.5 100 37.0
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 1.0e-08 64.3 97 35.1
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.0e-08 64.3 97 35.1
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-08 63.5 105 38.1
Peaxi162Scf00087g00098 Petunia axillaris HOM05D006921 ORTHO05D009185 5.2e-08 62.0 97 34.0
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 6.7e-08 61.6 106 37.7
Sopen09g007310 Solanum pennellii HOM05D000017 ORTHO05D009185 6.7e-08 61.6 99 34.3
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 8.8e-08 61.2 102 37.3
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 8.8e-08 61.2 126 29.4
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.8e-08 61.2 101 31.7
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 1.5e-07 60.5 97 33.0
Nitab4.5_0001926g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-07 60.1 47 61.7
Nitab4.5_0002403g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.4e-07 58.9 113 31.0
Nitab4.5_0003470g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.4e-07 58.9 113 32.7
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 9.7e-07 57.8 132 31.8
Nitab4.5_0006259g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-06 57.0 117 30.8
Nitab4.5_0008075g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-06 57.0 120 30.8
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.7e-06 57.0 99 39.4
Nitab4.5_0000309g0360 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.8e-06 56.2 98 33.7
Peaxi162Scf00164g01219 Petunia axillaris HOM05D000017 ORTHO05D001349 2.8e-06 56.2 101 30.7
Peaxi162Scf00006g00342 Petunia axillaris HOM05D000017 ORTHO05D001349 6.3e-06 55.1 119 29.4
Peaxi162Scf00089g00005 Petunia axillaris HOM05D000017 ORTHO05D001349 6.3e-06 55.1 128 32.0
Peaxi162Scf00449g00046 Petunia axillaris HOM05D006921 ORTHO05D009185 6.3e-06 55.1 92 32.6
Peaxi162Scf00147g01110 Petunia axillaris HOM05D000017 ORTHO05D001349 8.2e-06 54.7 101 29.7
Sopen09g020850 Solanum pennellii HOM05D006921 ORTHO05D009185 8.2e-06 54.7 132 31.1
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.2e-06 54.7 92 34.8
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.2e-06 54.7 97 33.0


User provided reference genes

Program Settings