Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 9.2e-149 530.4 309 100.0
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 1.8e-107 393.3 301 75.4
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 2.3e-107 392.9 300 83.3
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 6.3e-89 331.6 299 70.2
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 8.5e-86 321.2 299 69.2
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 2.1e-84 316.6 299 69.2
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 1.6e-76 290.4 283 68.2
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 7.2e-69 265.0 299 58.9
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 4.8e-65 252.3 292 57.2
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 2.4e-64 250.0 286 46.2
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 9.4e-61 238.0 266 50.4
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 6.1e-60 235.3 283 42.8
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 6.8e-59 231.9 296 43.2
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 4.4e-58 229.2 294 48.3
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.3e-57 227.6 307 52.4
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 4.1e-56 222.6 290 51.0
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 5.0e-54 215.7 292 54.5
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 5.0e-54 215.7 280 54.3
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 8.5e-54 214.9 308 50.6
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.6e-52 210.7 292 53.8
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 2.7e-52 209.9 300 53.3
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 1.5e-50 204.1 299 43.5
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 3.4e-50 203.0 297 47.1
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 1.3e-49 201.1 284 39.8
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 1.7e-49 200.7 297 37.7
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 3.7e-49 199.5 294 46.6
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.4e-48 197.6 295 46.8
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 3.1e-48 196.4 285 51.9
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 3.1e-48 196.4 285 51.9
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 1.2e-47 194.5 285 51.9
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 1.2e-47 194.5 285 51.9
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 2.0e-47 193.7 289 48.1
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 4.5e-47 192.6 294 50.0
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 5.9e-47 192.2 292 51.7
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 3.8e-46 189.5 306 34.6
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 1.1e-45 188.0 289 50.9
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 1.9e-45 187.2 288 50.7
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 2.5e-45 186.8 297 36.4
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.2e-44 184.5 298 39.6
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 3.6e-44 183.0 295 50.2
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 4.7e-44 182.6 297 47.8
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 6.8e-43 178.7 297 46.1
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 8.9e-43 178.3 299 48.2
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 2.6e-42 176.8 288 50.7
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 3.4e-42 176.4 291 47.1
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 5.7e-42 175.6 293 49.1
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 9.8e-42 174.9 302 47.7
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 2.9e-41 173.3 307 47.9
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.4e-40 171.0 286 34.3
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.6e-39 167.5 298 48.3
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.6e-39 167.5 298 48.3
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 2.7e-39 166.8 299 45.8
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 5.0e-38 162.5 198 60.6
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.9e-37 160.6 308 44.2
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 2.5e-37 160.2 283 48.4
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 2.5e-37 160.2 292 47.9
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 3.3e-37 159.8 294 46.3
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 4.3e-37 159.5 303 45.5
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 2.1e-36 157.1 308 43.8
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 2.8e-36 156.8 295 44.7
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 8.0e-36 155.2 273 52.4
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 1.4e-35 154.5 271 47.2
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 5.2e-35 152.5 294 45.6
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 8.9e-35 151.8 288 47.9
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 2.6e-34 150.2 264 49.6
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 1.3e-33 147.9 296 43.2
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 1.9e-32 144.1 289 46.4
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.4e-32 143.7 241 51.5
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 9.2e-32 141.7 306 44.8
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 1.0e-30 138.3 306 43.1
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 1.0e-30 138.3 290 45.2
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 2.3e-30 137.1 288 42.0
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 3.0e-30 136.7 292 43.8
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 9.5e-29 131.7 291 43.0
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 2.8e-28 130.2 285 45.6
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 1.1e-27 128.3 272 45.6
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 8.9e-27 125.2 288 42.4
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 2.2e-25 120.6 136 47.8
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 1.6e-23 114.4 161 37.3
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.1e-23 114.0 193 55.4
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 4.3e-21 106.3 291 40.5
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 1.1e-19 101.7 115 42.6
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 5.2e-19 99.4 166 33.1
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 2.2e-17 94.0 165 34.5
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 3.2e-16 90.1 170 31.8
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 1.2e-15 88.2 135 35.6
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 7.8e-15 85.5 97 47.4
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 8.6e-14 82.0 97 46.4
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 1.6e-12 77.8 189 50.3
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 7.1e-08 62.4 104 34.6
Gohir.D07G184750 Gossypium hirsutum HOM05D007655 ORTHO05D009698 7.8e-07 58.9 105 38.1
Gohir.A06G047500 Gossypium hirsutum HOM05D000424 ORTHO05D009589 1.7e-06 57.8 93 32.3
Gorai.001G205200 Gossypium raimondii HOM05D007655 ORTHO05D009698 1.7e-06 57.8 101 38.6


User provided reference genes

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