Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.1e-125 453.4 243 100.0
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.3e-110 403.3 227 94.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 3.5e-95 352.1 253 76.7
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 8.7e-94 347.4 249 76.7
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 3.2e-80 302.4 210 77.1
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 9.3e-80 300.8 205 81.0
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 6.9e-59 231.5 227 57.7
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 1.2e-58 230.7 255 57.6
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 1.5e-58 230.3 245 58.0
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 7.7e-58 228.0 254 56.7
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 2.5e-56 223.0 257 57.2
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 4.2e-56 222.2 251 55.8
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 7.2e-56 221.5 257 55.3
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 9.4e-56 221.1 257 55.3
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 3.6e-55 219.2 255 54.5
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 4.7e-55 218.8 234 57.3
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.4e-54 217.2 249 56.2
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 5.1e-54 215.3 256 52.3
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.5e-53 213.8 256 50.4
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 4.8e-52 208.8 257 52.5
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 1.4e-51 207.2 256 48.8
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.4e-51 207.2 249 51.4
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 2.4e-51 206.5 244 52.0
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 4.1e-51 205.7 231 53.2
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 4.1e-51 205.7 232 54.7
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 5.9e-50 201.8 253 53.0
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 1.0e-49 201.1 246 50.8
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.3e-49 200.7 248 50.4
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.7e-49 200.3 253 50.6
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.2e-49 199.9 246 50.8
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.2e-48 195.7 250 51.6
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 9.4e-48 194.5 253 48.2
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.7e-47 193.0 256 50.0
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 6.1e-47 191.8 246 50.4
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 5.2e-46 188.7 225 49.8
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 6.7e-46 188.3 255 50.2
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.5e-45 187.2 255 50.2
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.5e-45 187.2 250 48.4
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.5e-45 187.2 246 48.4
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 3.3e-45 186.0 216 50.0
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 4.4e-45 185.7 252 49.6
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 5.7e-45 185.3 255 49.8
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.7e-44 183.7 258 49.2
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.7e-44 183.7 258 49.2
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.2e-44 183.3 258 49.2
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 2.2e-44 183.3 244 47.1
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.2e-44 183.3 166 62.0
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 6.3e-44 181.8 243 50.2
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 1.1e-43 181.0 193 55.4
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 4.1e-43 179.1 234 48.7
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.2e-42 177.6 256 48.0
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.7e-41 173.7 225 49.3
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.7e-41 173.7 233 49.4
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 1.7e-41 173.7 215 50.7
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 2.9e-41 172.9 259 46.7
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 6.5e-41 171.8 245 45.7
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 6.5e-41 171.8 244 48.0
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 1.1e-40 171.0 257 46.7
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 1.9e-40 170.2 211 49.3
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 3.2e-40 169.5 256 46.9
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 4.2e-40 169.1 259 47.5
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 4.2e-40 169.1 223 49.8
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.2e-39 167.5 249 43.8
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 2.7e-39 166.4 261 45.6
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 4.7e-39 165.6 166 55.4
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.4e-38 164.1 205 49.3
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.4e-38 164.1 105 77.1
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.4e-38 164.1 105 77.1
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 1.8e-38 163.7 254 45.7
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 2.3e-38 163.3 250 46.0
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 2.0e-37 160.2 223 49.8
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 2.6e-37 159.8 113 69.0
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 3.4e-37 159.5 249 44.2
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 4.4e-37 159.1 154 57.8
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 4.4e-37 159.1 246 43.9
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 5.7e-37 158.7 243 44.0
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 7.5e-37 158.3 254 44.9
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 2.2e-36 156.8 133 66.9
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.7e-36 156.0 115 69.6
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 4.8e-36 155.6 150 54.7
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 4.8e-36 155.6 150 54.7
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 6.3e-36 155.2 150 54.7
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 6.3e-36 155.2 163 51.5
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 6.3e-36 155.2 250 44.8
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 8.3e-36 154.8 199 46.7
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-35 154.1 116 65.5
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-35 154.1 116 65.5
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.4e-35 154.1 116 65.5
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.4e-35 154.1 116 65.5
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 2.4e-35 153.3 154 53.2
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 7.0e-35 151.8 199 46.7
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.0e-34 150.2 190 48.4
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 1.3e-33 147.5 258 43.0
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 2.9e-33 146.4 177 48.0
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.9e-33 146.4 237 42.6
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 1.1e-32 144.4 164 49.4
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 4.2e-32 142.5 176 51.7
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 4.2e-32 142.5 259 42.1
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 9.4e-32 141.4 257 42.4
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 9.4e-32 141.4 218 43.6
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.2e-31 141.0 157 53.5
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 4.4e-29 132.5 135 57.8
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 5.7e-29 132.1 158 50.0
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.7e-28 130.6 179 46.4
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 1.2e-23 114.4 191 45.0
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 2.1e-23 113.6 83 63.9
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 1.1e-19 101.3 208 36.5
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.6e-15 87.4 180 40.6
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 2.0e-13 80.5 157 41.4
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 4.3e-08 62.8 63 55.6
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 1.1e-06 58.2 130 32.3


User provided reference genes

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