Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002700g0200 Nicotiana tabacum HOM05D006125 ORTHO05D007404 1.5e-40 169.1 86 100.0
Nitab4.5_0009867g0040 Nicotiana tabacum HOM05D006125 ORTHO05D007404 5.5e-35 150.6 79 97.5
PGSC0003DMG400014151 Solanum tuberosum HOM05D006125 ORTHO05D007404 1.6e-34 149.1 86 87.2
CAN.G407.2 Capsicum annuum HOM05D006125 ORTHO05D007404 4.7e-34 147.5 89 84.3
Solyc03g117580.3 Solanum lycopersicum HOM05D006125 ORTHO05D007404 1.8e-33 145.6 87 86.2
Sopen03g036490 Solanum pennellii HOM05D006125 ORTHO05D007404 1.8e-33 145.6 87 86.2
Actinidia25476 Actinidia chinensis HOM05D006125 ORTHO05D007404 4.2e-27 124.4 81 75.3
Cc04_g05190 Coffea canephora HOM05D006125 ORTHO05D007404 1.6e-26 122.5 83 69.9
Dinv21417 Davidia involucrata HOM05D006125 ORTHO05D007404 2.1e-26 122.1 81 75.3
QL07p030560 Quercus lobata HOM05D006125 ORTHO05D007404 2.1e-26 122.1 83 71.1
Migut.I00687 Erythranthe guttata HOM05D006125 ORTHO05D007404 2.7e-26 121.7 86 72.1
QL07p031505 Quercus lobata HOM05D006125 ORTHO05D007404 3.6e-26 121.3 83 71.1
Ciclev10026865m.g Citrus clementina HOM05D006125 ORTHO05D007404 6.1e-26 120.6 84 72.6
SalBow7G4057 Salvia bowleyana HOM05D006125 ORTHO05D007404 1.8e-25 119.0 79 70.9
Zm00001eb176360 Zea mays HOM05D006125 ORTHO05D007404 1.8e-25 119.0 72 76.4
Os12g0556400 Oryza sativa ssp. japonica HOM05D006125 ORTHO05D007404 5.2e-25 117.5 72 73.6
Manes.11G068700 Manihot esculenta HOM05D006125 ORTHO05D007404 6.7e-25 117.1 88 69.3
Oeu009806.1 Olea europaea HOM05D006125 ORTHO05D007404 6.7e-25 117.1 83 68.7
CANSAT56G2558 Cannabis sativa HOM05D006125 ORTHO05D007404 8.8e-25 116.7 83 68.7
Actinidia18251 Actinidia chinensis HOM05D006125 ORTHO05D007404 7.5e-24 113.6 84 69.0
Prupe.3G100100 Prunus persica HOM05D006125 ORTHO05D007404 7.5e-24 113.6 82 68.3
Hma1.2p1_0329F.1_g127170 Hydrangea macrophylla HOM05D006125 ORTHO05D007404 9.7e-24 113.2 80 68.8
Thecc.06G043200 Theobroma cacao HOM05D006125 ORTHO05D007404 9.7e-24 113.2 77 68.8
Gohir.A06G114500 Gossypium hirsutum HOM05D006125 ORTHO05D007404 1.3e-23 112.8 75 69.3
Gohir.D06G119100 Gossypium hirsutum HOM05D006125 ORTHO05D007404 1.3e-23 112.8 75 69.3
Os08g0272000 Oryza sativa ssp. japonica HOM05D006125 ORTHO05D007404 2.2e-23 112.1 75 69.3
AL2G40490 Arabidopsis lyrata HOM05D006125 ORTHO05D007404 2.8e-23 111.7 81 66.7
Phvul.010G162500 Phaseolus vulgaris HOM05D006125 ORTHO05D007404 2.8e-23 111.7 82 68.3
Rhsim08G0204300 Rhododendron simsii HOM05D006125 ORTHO05D007404 6.3e-23 110.5 95 63.2
CiPaw.09G167300 Carya illinoinensis HOM05D006125 ORTHO05D007404 1.1e-22 109.8 82 64.6
Ca_06644_v3 Cicer arietinum L. HOM05D006125 ORTHO05D007404 1.1e-22 109.8 89 64.0
Lalb_Chr04g0264571 Lupinus albus HOM05D006125 ORTHO05D007404 1.1e-22 109.8 70 75.7
Prupe.2G074900 Prunus persica HOM05D006125 ORTHO05D007404 1.1e-22 109.8 84 61.9
MELO3C023472.2 Cucumis melo HOM05D006125 ORTHO05D007404 1.4e-22 109.4 74 66.2
Glyma.08G219900 Glycine max HOM05D006125 ORTHO05D007404 1.4e-22 109.4 71 71.8
Duzib160G0610 Durio zibethinus HOM05D006125 ORTHO05D007404 1.8e-22 109.0 76 65.8
RcHm_v2.0_Chr2g0132751 Rosa chinensis HOM05D006125 ORTHO05D007404 2.4e-22 108.6 73 74.0
Lj3g0014233 Lotus japonicus HOM05D006125 ORTHO05D007404 3.1e-22 108.2 73 69.9
PGR031G3360 Punica granatum HOM05D006125 ORTHO05D007404 3.1e-22 108.2 73 68.5
PGR037G0004 Punica granatum HOM05D006125 ORTHO05D007404 3.1e-22 108.2 73 68.5
ClCG09G003380 Citrullus lanatus HOM05D006125 ORTHO05D007404 4.1e-22 107.8 69 71.0
Sed0014955 Sechium edule HOM05D006125 ORTHO05D007404 4.1e-22 107.8 68 73.5
MD17G1224400 Malus domestica HOM05D006125 ORTHO05D007404 5.3e-22 107.5 67 74.6
MD09G1225600 Malus domestica HOM05D006125 ORTHO05D007404 9.1e-22 106.7 67 73.1
CARHR073580 Cardamine hirsuta HOM05D006125 ORTHO05D007404 1.2e-21 106.3 80 63.8
Sc12g0007910 Simmondsia chinensis HOM05D006125 ORTHO05D007404 1.2e-21 106.3 79 65.8
TAR383G0490 Trochodendron aralioides HOM05D006125 ORTHO05D007404 1.2e-21 106.3 69 71.0
ATR0580G075 Amborella trichopoda HOM05D006125 ORTHO05D007404 1.6e-21 105.9 68 72.1
Eucgr.J03118 Eucalyptus grandis HOM05D006125 ORTHO05D007404 1.6e-21 105.9 77 66.2
Glyma.07G021900 Glycine max HOM05D006125 ORTHO05D007404 1.6e-21 105.9 80 63.8
HanXRQChr05g0153751 Helianthus annuus HOM05D006125 ORTHO05D007404 2.0e-21 105.5 70 68.6
MBI14_g09098_MAGBIO Magnolia biondii HOM05D006125 ORTHO05D007404 2.0e-21 105.5 85 58.8
Psat7g263200 Pisum sativum HOM05D006125 ORTHO05D007404 2.0e-21 105.5 80 66.2
TWI12G0957 Tripterygium wilfordii HOM05D006125 ORTHO05D007404 2.0e-21 105.5 81 63.0
Gorai.010G136700 Gossypium raimondii HOM05D006125 ORTHO05D007404 2.7e-21 105.1 81 63.0
Medtr4g007290 Medicago truncatula HOM05D006125 ORTHO05D007404 3.5e-21 104.8 75 66.7
CSS0032300 Camellia sinensis var. sinensis HOM05D006125 ORTHO05D007404 4.5e-21 104.4 91 62.6
unitig_62.g23831 Utricularia gibba HOM05D006125 ORTHO05D007404 4.5e-21 104.4 80 62.5
ECA246G3825 Erigeron canadensis HOM05D006125 ORTHO05D007404 7.7e-21 103.6 81 64.2
Sed0010339 Sechium edule HOM05D006125 ORTHO05D007404 1.0e-20 103.2 68 72.1
TPR.G29449 Trifolium pratense HOM05D006125 ORTHO05D007404 1.0e-20 103.2 84 60.7
Atru.chr1.2788 Acer truncatum HOM05D006125 ORTHO05D007404 1.3e-20 102.8 75 64.0
HPP92_003757 Vanilla planifolia HOM05D006125 ORTHO05D007404 1.3e-20 102.8 71 67.6
arahy.Tifrunner.gnm1.ann1.CEK6A4 Arachis hypogaea HOM05D006125 ORTHO05D007404 8.5e-20 100.1 80 65.0
Peaxi162Scf00553g00539 Petunia axillaris HOM05D006125 ORTHO05D007404 1.5e-19 99.4 84 67.9
AUR62034053 Chenopodium quinoa HOM05D006125 ORTHO05D007404 1.9e-19 99.0 56 76.8
Duzib235G1153 Durio zibethinus HOM05D006125 ORTHO05D007404 1.9e-19 99.0 61 68.9
arahy.Tifrunner.gnm1.ann1.P1DY4U Arachis hypogaea HOM05D006125 ORTHO05D007404 2.5e-19 98.6 77 64.9
AUR62040628 Chenopodium quinoa HOM05D006125 ORTHO05D007404 2.5e-19 98.6 56 76.8
Manes.04G101402 Manihot esculenta HOM05D006125 ORTHO05D007404 2.5e-19 98.6 57 78.9
Potri.001G043300 Populus trichocarpa HOM05D006125 ORTHO05D007404 5.5e-19 97.4 79 59.5
PSO782G1324 Papaver somniferum HOM05D006125 ORTHO05D007404 1.6e-18 95.9 71 66.2
AT1G80890 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 2.3e-17 92.0 60 66.7
FAN05G4250 Fragaria x ananassa HOM05D006125 ORTHO05D007404 4.0e-17 91.3 69 63.8
FAN14G2502 Fragaria x ananassa HOM05D006125 ORTHO05D007404 4.0e-17 91.3 84 56.0
BraA07t31987Z Brassica rapa HOM05D006125 ORTHO05D007404 1.2e-16 89.7 62 62.9
FvH4_6g28500 Fragaria vesca HOM05D006125 ORTHO05D007404 1.5e-16 89.4 81 56.8
Thhalv10019388m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 3.4e-16 88.2 61 62.3
AL1G28160 Arabidopsis lyrata HOM05D006125 ORTHO05D007404 4.4e-16 87.8 62 62.9
AT1G16000 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 5.7e-16 87.4 61 63.9
A07p44800 Brassica napus HOM05D006125 ORTHO05D007404 5.7e-16 87.4 61 62.3
C06p53620 Brassica napus HOM05D006125 ORTHO05D007404 5.7e-16 87.4 61 62.3
THA.LOC104808176 Tarenaya hassleriana HOM05D006125 ORTHO05D007404 5.7e-16 87.4 58 65.5
Cpa.g.sc10.63 Carica papaya HOM05D006125 ORTHO05D007404 9.8e-16 86.7 83 55.4
FAN02G1155 Fragaria x ananassa HOM05D006125 ORTHO05D007404 1.7e-15 85.9 69 60.9
Carub.0001s1580 Capsella rubella HOM05D006125 ORTHO05D007404 2.8e-15 85.1 86 51.2
BcaC08g47537 Brassica carinata HOM05D006125 ORTHO05D007404 4.8e-15 84.3 60 61.7
BolC6t40378H Brassica oleracea HOM05D006125 ORTHO05D007404 4.8e-15 84.3 60 61.7
Aa31LG4G1200 Aethionema arabicum HOM05D006125 ORTHO05D007404 8.3e-15 83.6 66 60.6
Sp5g34850 Schrenkiella parvula HOM05D006125 ORTHO05D007404 8.3e-15 83.6 68 55.9
BcaC08g45345 Brassica carinata HOM05D006125 ORTHO05D007404 1.8e-14 82.4 57 63.2
C06p29590 Brassica napus HOM05D006125 ORTHO05D007404 1.8e-14 82.4 57 63.2
BolC6t38124H Brassica oleracea HOM05D006125 ORTHO05D007404 1.8e-14 82.4 57 63.2
EL10Ac8g19423 Beta vulgaris HOM05D006125 ORTHO05D007404 3.1e-14 81.6 69 55.1
COL.COLO4_26743 Corchorus olitorius HOM05D006125 ORTHO05D007404 4.1e-14 81.3 43 76.7
Aa31LG7G580 Aethionema arabicum HOM05D006125 ORTHO05D007404 5.4e-14 80.9 62 62.9
BcaB02g08714 Brassica carinata HOM05D006125 ORTHO05D007404 7.0e-14 80.5 61 57.4
A07p26910 Brassica napus HOM05D006125 ORTHO05D007404 7.0e-14 80.5 56 64.3
BraA07t30336Z Brassica rapa HOM05D006125 ORTHO05D007404 1.2e-13 79.7 55 63.6
Thhalv10009235m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 1.2e-13 79.7 61 60.7
CARHR016510 Cardamine hirsuta HOM05D006125 ORTHO05D007404 1.6e-13 79.3 57 66.7
GSVIVG01015983001 Vitis vinifera HOM05D006125 ORTHO05D007404 2.7e-13 78.6 46 65.2
Dinv23278 Davidia involucrata HOM05D006125 ORTHO05D007404 3.5e-13 78.2 59 67.8
TPR.G3325 Trifolium pratense HOM05D006125 ORTHO05D007404 3.5e-13 78.2 74 54.1
Sp1g14310 Schrenkiella parvula HOM05D006125 ORTHO05D007404 1.3e-12 76.3 58 55.2
Sabra01G0029800 Salix brachista HOM05D006125 ORTHO05D007404 2.9e-12 75.1 111 38.7
vmacro19061 Vaccinium macrocarpon HOM05D006125 ORTHO05D007404 8.6e-12 73.6 60 61.7
CDE06G2663 Ceratophyllum demersum HOM05D006125 ORTHO05D007404 1.9e-11 72.4 70 47.1
DCAR_021146 Daucus carota HOM05D006125 ORTHO05D007404 1.9e-11 72.4 40 75.0
CDE03G0106 Ceratophyllum demersum HOM05D006125 ORTHO05D007404 2.5e-11 72.0 76 44.7
Cfa017829 Carpinus fangiana HOM05D006125 ORTHO05D007404 5.5e-11 70.9 55 60.0
HanXRQChr08g0219721 Helianthus annuus HOM05D006125 ORTHO05D007404 5.5e-11 70.9 39 71.8
SMO367G0251 Selaginella moellendorffii HOM05D010715 ORTHO05D015311 5.5e-11 70.9 78 46.2
SGA_v2.0_scaffold5G02790 Striga asiatica HOM05D006125 ORTHO05D007404 7.2e-11 70.5 41 70.7
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 9.5e-11 70.1 58 55.2
SalBow6G4114 Salvia bowleyana HOM05D006125 ORTHO05D007404 1.6e-10 69.3 55 56.4
CsaV3_7G031850 Cucumis sativus L. HOM05D006125 ORTHO05D007404 4.7e-10 67.8 45 57.8
QL04p040226 Quercus lobata HOM05D006125 ORTHO05D007404 4.7e-10 67.8 53 54.7
Aqoxy7G03387 Aquilegia oxysepala HOM05D006125 ORTHO05D007404 4.0e-09 64.7 54 53.7
Haze_20423 Corylus avellana HOM05D006125 ORTHO05D007404 8.9e-09 63.5 57 56.1
SHI11295 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-08 63.2 50 54.0
Pp3c10_10990 Physcomitrium patens HOM05D006125 ORTHO05D007404 2.6e-08 62.0 63 39.7
Potri.003G183501 Populus trichocarpa HOM05D006125 ORTHO05D007404 7.5e-08 60.5 62 45.2
SEGI_23088 Sequoiadendron giganteum HOM05D006125 ORTHO05D007404 9.8e-08 60.1 40 57.5
BolC2t09694H Brassica oleracea HOM05D006125 ORTHO05D007404 3.7e-07 58.2 44 52.3
BcaB05g25217 Brassica carinata HOM05D006125 ORTHO05D007404 1.8e-06 55.8 105 38.1
Sabra03G0134100 Salix brachista HOM05D006125 ORTHO05D007404 3.1e-06 55.1 78 38.5
CBR_g24249 Chara braunii HOM05D006125 ORTHO05D007404 4.1e-06 54.7 58 48.3


User provided reference genes

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