Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 6.6e-179 630.6 311 100.0
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 1.7e-166 589.3 311 94.5
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 3.0e-163 578.6 312 91.0
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 4.3e-162 574.7 311 92.3
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 2.1e-161 572.4 309 92.6
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 1.1e-160 570.1 309 91.9
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 7.1e-157 557.4 309 90.6
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 1.5e-146 523.1 309 82.2
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 1.5e-143 513.1 307 81.8
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 1.1e-141 506.9 314 78.3
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 4.6e-140 501.5 273 88.3
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 6.0e-140 501.1 309 80.6
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 7.8e-140 500.7 306 80.7
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.0e-139 500.4 300 82.0
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.5e-138 496.5 265 89.1
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 1.9e-138 496.1 270 88.9
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 3.3e-138 495.4 267 88.8
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 7.3e-138 494.2 270 88.1
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 7.3e-138 494.2 307 77.9
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 1.3e-137 493.4 310 78.1
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 3.6e-137 491.9 306 79.7
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 4.8e-137 491.5 313 78.6
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 6.2e-137 491.1 303 79.5
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 8.1e-137 490.7 311 80.4
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 2.4e-136 489.2 310 77.7
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 3.1e-136 488.8 308 78.2
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 3.1e-136 488.8 305 79.0
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 4.0e-136 488.4 308 78.2
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 4.0e-136 488.4 280 85.0
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 6.9e-136 487.6 296 80.7
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 9.0e-136 487.3 286 83.6
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 1.2e-135 486.9 314 75.8
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 1.5e-135 486.5 267 86.1
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 2.6e-135 485.7 308 77.9
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 2.6e-135 485.7 307 77.9
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 7.6e-135 484.2 270 87.0
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 7.6e-135 484.2 302 78.8
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 1.3e-134 483.4 308 77.9
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 2.2e-134 482.6 267 85.8
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 3.8e-134 481.9 290 80.0
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 4.9e-134 481.5 271 83.8
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 6.4e-134 481.1 271 84.1
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 6.4e-134 481.1 255 89.4
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 8.4e-134 480.7 316 75.6
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 1.1e-133 480.3 310 77.4
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 2.4e-133 479.2 289 79.6
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 2.4e-133 479.2 279 82.4
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 5.4e-133 478.0 267 84.3
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 2.1e-132 476.1 313 74.8
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 2.1e-132 476.1 313 74.8
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 2.7e-132 475.7 275 82.2
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 4.6e-132 474.9 307 76.5
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 7.9e-132 474.2 315 76.2
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 7.9e-132 474.2 287 80.1
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 1.3e-131 473.4 264 84.5
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 1.3e-131 473.4 277 82.3
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 1.3e-131 473.4 313 77.0
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 1.3e-131 473.4 302 77.5
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 1.8e-131 473.0 309 75.7
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 2.3e-131 472.6 311 75.9
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 3.0e-131 472.2 262 85.5
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 3.0e-131 472.2 310 74.8
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 5.1e-131 471.5 268 84.0
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 6.7e-131 471.1 277 81.9
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 1.1e-130 470.3 267 83.1
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 1.9e-130 469.5 277 81.6
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 2.5e-130 469.2 277 81.6
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 4.3e-130 468.4 300 77.3
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 9.6e-130 467.2 269 83.3
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 1.6e-129 466.5 299 76.3
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 6.2e-129 464.5 277 81.2
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.4e-128 463.4 311 75.2
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 2.4e-128 462.6 243 89.7
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 2.4e-128 462.6 243 89.7
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 9.0e-128 460.7 288 77.4
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 9.0e-128 460.7 307 74.3
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 1.2e-127 460.3 307 74.3
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 1.0e-126 457.2 281 77.9
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 3.8e-126 455.3 310 73.5
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.1e-125 453.8 281 77.6
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 1.9e-125 453.0 243 88.5
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 1.9e-125 453.0 281 77.9
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 1.9e-125 453.0 243 88.1
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 2.5e-125 452.6 273 79.1
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 3.2e-125 452.2 281 77.9
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 4.2e-125 451.8 306 73.5
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 4.2e-125 451.8 291 75.6
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 1.2e-124 450.3 284 76.4
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 6.0e-124 448.0 263 80.2
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 1.3e-123 446.8 267 79.8
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 1.8e-123 446.4 273 79.9
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 3.9e-123 445.3 275 77.5
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 6.7e-123 444.5 287 74.2
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 5.3e-120 434.9 269 78.8
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 2.5e-117 426.0 252 80.2
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 6.1e-116 421.4 322 68.9
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 5.0e-110 401.7 219 89.0
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 1.1e-109 400.6 268 70.5
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 5.3e-104 381.7 283 70.3
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 1.5e-103 380.2 272 68.4
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 5.9e-103 378.3 259 68.7
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 2.2e-102 376.3 243 78.6
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 2.1e-100 369.8 281 62.3
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 4.7e-100 368.6 269 65.8
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 5.7e-98 361.7 236 76.7
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 2.8e-97 359.4 192 89.6
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 3.1e-96 355.9 313 58.1
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 3.1e-96 355.9 190 90.0
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 3.2e-93 345.9 192 84.4
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 5.5e-93 345.1 190 86.3
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 1.6e-92 343.6 192 83.9
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 6.3e-89 331.6 263 62.0
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 4.1e-88 328.9 173 89.6
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 5.5e-85 318.5 224 69.2
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 2.7e-84 316.2 256 61.3
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 2.3e-83 313.2 187 80.7
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 1.7e-81 307.0 243 60.1
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 1.2e-79 300.8 209 73.7
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 1.5e-69 267.3 256 53.9
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.0e-62 244.6 257 55.6
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 1.3e-62 244.2 144 80.6
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 2.3e-62 243.4 188 67.6
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 3.5e-39 166.4 126 65.9
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 1.2e-36 157.9 85 87.1
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 6.2e-36 155.6 276 37.0
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 2.7e-23 113.6 315 28.6
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 6.0e-23 112.5 67 71.6
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 8.7e-22 108.6 65 78.5
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 3.6e-20 103.2 274 32.1
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 3.2e-16 90.1 104 55.8
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 1.2e-15 88.2 70 64.3
CARHR016590 Cardamine hirsuta HOM05D006171 ORTHO05D007294 8.7e-06 55.5 49 55.1


User provided reference genes

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