Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.9e-114 416.0 232 100.0
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 3.5e-108 395.2 231 97.0
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 8.0e-105 384.0 231 91.8
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 8.0e-105 384.0 231 91.3
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 1.4e-104 383.3 231 91.3
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 2.0e-103 379.4 231 92.2
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 9.8e-103 377.1 226 92.9
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 3.5e-84 315.5 214 81.8
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 4.3e-82 308.5 216 78.7
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 7.3e-82 307.8 215 70.7
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 2.3e-80 302.8 214 80.8
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 4.0e-80 302.0 217 75.1
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 8.9e-80 300.8 216 75.0
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 7.5e-79 297.7 217 75.1
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 2.9e-78 295.8 218 75.2
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 2.9e-78 295.8 215 76.7
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 4.9e-78 295.0 215 76.7
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 6.4e-78 294.7 215 76.7
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.1e-77 293.9 216 71.8
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 1.9e-77 293.1 215 76.7
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.4e-77 292.7 219 74.4
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 3.2e-77 292.4 219 73.5
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 3.2e-77 292.4 213 77.0
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 7.0e-77 291.2 215 75.3
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 7.0e-77 291.2 213 76.5
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 1.2e-76 290.4 217 73.7
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.2e-76 290.4 215 76.3
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.2e-76 290.4 218 73.9
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.6e-76 290.0 215 76.3
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.6e-76 290.0 215 76.3
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 2.0e-76 289.7 209 75.6
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 2.7e-76 289.3 217 75.1
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.7e-76 289.3 217 73.7
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 6.0e-76 288.1 217 67.7
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 6.0e-76 288.1 217 67.7
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 6.0e-76 288.1 215 75.8
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 7.8e-76 287.7 226 62.8
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.3e-75 287.0 217 72.8
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 1.7e-75 286.6 216 74.1
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 3.9e-75 285.4 212 74.5
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 5.0e-75 285.0 216 64.8
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 5.0e-75 285.0 221 63.3
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 6.6e-75 284.6 218 65.1
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 6.6e-75 284.6 226 61.9
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 6.6e-75 284.6 217 72.4
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.1e-74 283.9 217 74.2
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.5e-74 283.5 217 71.9
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 4.3e-74 282.0 212 73.6
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 4.3e-74 282.0 212 72.6
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 4.3e-74 282.0 216 75.0
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 7.3e-74 281.2 167 79.0
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-73 280.4 217 71.4
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 1.6e-73 280.0 215 73.0
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 1.6e-73 280.0 215 74.9
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 2.1e-73 279.6 216 73.6
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 2.8e-73 279.3 218 64.2
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 4.7e-73 278.5 210 73.8
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 8.1e-73 277.7 216 73.6
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 8.1e-73 277.7 213 71.8
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.1e-72 277.3 221 70.6
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.1e-72 277.3 218 63.3
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 1.1e-72 277.3 218 61.9
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.4e-72 276.9 207 65.7
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.4e-72 276.9 216 73.1
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.8e-72 276.6 219 70.8
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 3.1e-72 275.8 216 72.2
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.0e-72 275.4 216 61.1
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 4.0e-72 275.4 168 78.0
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 5.2e-72 275.0 216 71.8
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.2e-71 273.9 216 73.1
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.2e-71 273.9 216 71.8
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 1.5e-71 273.5 215 72.1
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 1.5e-71 273.5 215 72.1
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 2.0e-71 273.1 218 61.9
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 2.6e-71 272.7 216 72.2
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 2.6e-71 272.7 214 69.2
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 3.4e-71 272.3 216 72.7
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 4.4e-71 271.9 211 70.6
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 9.9e-71 270.8 211 71.1
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 2.2e-70 269.6 214 72.0
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 6.4e-70 268.1 219 71.7
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 6.4e-70 268.1 209 61.2
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 8.3e-70 267.7 198 76.3
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 2.4e-69 266.2 218 61.0
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 9.2e-69 264.2 218 69.7
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 3.5e-68 262.3 207 72.0
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 6.0e-68 261.5 207 64.7
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 7.8e-68 261.2 216 68.5
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 1.7e-67 260.0 207 72.0
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.7e-67 260.0 207 64.7
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 2.3e-67 259.6 204 73.0
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 3.0e-67 259.2 209 70.3
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 3.9e-67 258.8 194 74.7
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 3.9e-67 258.8 209 71.8
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 3.9e-67 258.8 267 50.9
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.5e-66 256.1 209 69.9
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 3.3e-66 255.8 207 72.0
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.8e-65 252.7 207 71.5
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 4.7e-65 251.9 166 72.9
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 8.1e-65 251.1 207 70.0
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 5.2e-64 248.4 219 55.7
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 5.8e-63 245.0 219 54.3
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 9.9e-63 244.2 207 70.0
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.7e-62 243.4 207 59.4
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 8.7e-59 231.1 210 61.9
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.5e-58 230.3 195 63.6
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 4.3e-58 228.8 222 51.8
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 2.4e-56 223.0 216 68.1
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 9.9e-55 217.6 215 51.2
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 9.3e-53 211.1 215 52.1
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 2.0e-47 193.4 168 58.3
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 1.3e-46 190.7 213 54.0
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 3.5e-44 182.6 176 51.1
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 6.0e-44 181.8 219 51.6
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.4e-40 169.9 217 53.0
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.3e-38 164.1 151 53.6
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 9.0e-32 141.4 202 48.0
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.0e-31 140.2 100 68.0
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 4.5e-23 112.5 97 80.4
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 6.5e-14 82.0 78 52.6
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 5.1e-11 72.4 46 71.7
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-10 68.9 151 34.4
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-09 67.0 120 37.5
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 4.8e-09 65.9 65 50.8
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-08 64.3 123 37.4
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-08 64.3 123 37.4
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-06 57.8 140 29.3
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-06 57.8 140 29.3


User provided reference genes

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