Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002693g0110 Nicotiana tabacum HOM05D000695 ORTHO05D286772 4.3e-50 201.1 104 100.0
PGSC0003DMG400016568 Solanum tuberosum HOM05D008583 ORTHO05D012196 3.9e-11 71.6 44 79.5
Nitab4.5_0002693g0090 Nicotiana tabacum HOM05D000695 ORTHO05D000615 5.1e-11 71.2 55 67.3
Nitab4.5_0001421g0050 Nicotiana tabacum HOM05D000695 ORTHO05D000615 1.1e-10 70.1 47 72.3
Sopen04g023260 Solanum pennellii HOM05D000695 ORTHO05D023157 1.1e-10 70.1 61 60.7
PGSC0003DMG400016563 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.1e-10 70.1 44 77.3
PGSC0003DMG400016564 Solanum tuberosum HOM05D000695 ORTHO05D000615 2.5e-10 68.9 44 77.3
Nitab4.5_0003533g0030 Nicotiana tabacum HOM05D000695 ORTHO05D000615 3.3e-10 68.6 46 76.1
Solyc04g052960.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 4.3e-10 68.2 44 77.3
PGSC0003DMG400016565 Solanum tuberosum HOM05D000695 ORTHO05D000615 4.3e-10 68.2 44 77.3
Solyc04g053010.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 5.7e-10 67.8 41 82.9
Sopen11g006520 Solanum pennellii HOM05D000695 ORTHO05D000615 5.7e-10 67.8 45 73.3
PGSC0003DMG400016562 Solanum tuberosum HOM05D000695 ORTHO05D000615 5.7e-10 67.8 41 82.9
CAN.G321.54 Capsicum annuum HOM05D000695 ORTHO05D000615 7.4e-10 67.4 52 61.5
Solyc04g053030.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 7.4e-10 67.4 44 75.0
Sopen04g023320 Solanum pennellii HOM05D000695 ORTHO05D000615 7.4e-10 67.4 44 75.0
PGSC0003DMG400016567 Solanum tuberosum HOM05D000695 ORTHO05D000615 7.4e-10 67.4 44 75.0
Nitab4.5_0001438g0120 Nicotiana tabacum HOM05D000695 ORTHO05D000615 9.7e-10 67.0 48 68.8
PGSC0003DMG400015030 Solanum tuberosum HOM05D000695 ORTHO05D000615 9.7e-10 67.0 45 73.3
Nitab4.5_0001438g0130 Nicotiana tabacum HOM05D000695 ORTHO05D000615 1.3e-09 66.6 48 66.7
Solyc11g011710.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 1.3e-09 66.6 42 78.6
Sopen11g006530 Solanum pennellii HOM05D000695 ORTHO05D000615 1.3e-09 66.6 42 78.6
PGSC0003DMG400016569 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.3e-09 66.6 44 75.0
PGSC0003DMG400016585 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.3e-09 66.6 44 75.0
PGSC0003DMG400016586 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.3e-09 66.6 44 75.0
Nitab4.5_0003533g0050 Nicotiana tabacum HOM05D000695 ORTHO05D000615 1.7e-09 66.2 46 69.6
Solyc04g053020.2 Solanum lycopersicum HOM05D000695 ORTHO05D000615 1.7e-09 66.2 44 72.7
Sopen04g023300 Solanum pennellii HOM05D000695 ORTHO05D000615 1.7e-09 66.2 41 82.9
Sopen04g023330 Solanum pennellii HOM05D000695 ORTHO05D000615 2.2e-09 65.9 44 72.7
PGSC0003DMG400016584 Solanum tuberosum HOM05D000695 ORTHO05D000615 2.2e-09 65.9 44 70.5
Nitab4.5_0001088g0030 Nicotiana tabacum HOM05D000695 ORTHO05D000615 2.8e-09 65.5 46 67.4
Nitab4.5_0006562g0070 Nicotiana tabacum HOM05D000695 ORTHO05D000615 2.8e-09 65.5 48 68.8
Nitab4.5_0011736g0020 Nicotiana tabacum HOM05D000695 ORTHO05D000615 2.8e-09 65.5 45 71.1
Solyc11g011640.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 2.8e-09 65.5 42 76.2
Solyc11g011690.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 2.8e-09 65.5 45 71.1
Sopen11g006480 Solanum pennellii HOM05D000695 ORTHO05D000615 2.8e-09 65.5 42 76.2
Solyc11g011730.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 3.7e-09 65.1 44 70.5
PGSC0003DMG400016559 Solanum tuberosum HOM05D000695 ORTHO05D000615 3.7e-09 65.1 44 72.7
Nitab4.5_0001650g0050 Nicotiana tabacum HOM05D001174 ORTHO05D001003 4.8e-09 64.7 48 64.6
Nitab4.5_0003533g0040 Nicotiana tabacum HOM05D000695 ORTHO05D000615 4.8e-09 64.7 44 72.7
PGSC0003DMG400013250 Solanum tuberosum HOM05D000695 ORTHO05D000615 4.8e-09 64.7 44 72.7
PGSC0003DMG400016560 Solanum tuberosum HOM05D000695 ORTHO05D000615 4.8e-09 64.7 41 80.5
Sopen04g012620 Solanum pennellii HOM05D000695 ORTHO05D000615 6.3e-09 64.3 45 71.1
PGSC0003DMG400005024 Solanum tuberosum HOM05D000695 ORTHO05D000615 6.3e-09 64.3 44 72.7
PGSC0003DMG400046542 Solanum tuberosum HOM05D000695 ORTHO05D000615 6.3e-09 64.3 41 75.6
PGSC0003DMG400015029 Solanum tuberosum HOM05D000695 ORTHO05D000615 8.2e-09 63.9 45 75.6
Nitab4.5_0005124g0060 Nicotiana tabacum HOM05D000695 ORTHO05D000615 1.1e-08 63.5 48 62.5
PGSC0003DMG400013253 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.1e-08 63.5 44 68.2
PGSC0003DMG400016570 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.1e-08 63.5 45 75.6
Nitab4.5_0005124g0070 Nicotiana tabacum HOM05D000695 ORTHO05D000615 1.4e-08 63.2 44 68.2
PGSC0003DMG400013322 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.4e-08 63.2 44 68.2
Nitab4.5_0001438g0070 Nicotiana tabacum HOM05D000695 ORTHO05D000615 1.8e-08 62.8 48 64.6
Sopen11g006540 Solanum pennellii HOM05D000695 ORTHO05D000615 1.8e-08 62.8 42 73.8
PGSC0003DMG400016596 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.8e-08 62.8 45 75.6
Nitab4.5_0007284g0020 Nicotiana tabacum HOM05D000695 ORTHO05D000615 2.4e-08 62.4 53 60.4
PGSC0003DMG400005004 Solanum tuberosum HOM05D000695 ORTHO05D000615 2.4e-08 62.4 44 70.5
Sopen11g006470 Solanum pennellii HOM05D000695 ORTHO05D000615 3.1e-08 62.0 44 70.5
PGSC0003DMG400013371 Solanum tuberosum HOM05D000695 ORTHO05D000615 3.1e-08 62.0 44 65.9
CAN.G222.122 Capsicum annuum HOM05D000695 ORTHO05D000615 4.1e-08 61.6 52 57.7
Nitab4.5_0001650g0120 Nicotiana tabacum HOM05D000695 ORTHO05D000615 4.1e-08 61.6 44 68.2
Nitab4.5_0009898g0050 Nicotiana tabacum HOM05D000695 ORTHO05D000615 4.1e-08 61.6 48 62.5
CAN.G321.53 Capsicum annuum HOM05D000695 ORTHO05D000615 5.3e-08 61.2 44 68.2
Nitab4.5_0009898g0030 Nicotiana tabacum HOM05D000695 ORTHO05D000615 5.3e-08 61.2 47 63.8
Sopen11g006560 Solanum pennellii HOM05D000695 ORTHO05D000615 5.3e-08 61.2 44 65.9
Sopen04g023270 Solanum pennellii HOM05D000695 ORTHO05D000615 6.9e-08 60.8 45 66.7
PGSC0003DMG400013252 Solanum tuberosum HOM05D000695 ORTHO05D000615 6.9e-08 60.8 44 68.2
Solyc11g011630.3 Solanum lycopersicum HOM05D000695 ORTHO05D000615 9.1e-08 60.5 44 68.2
Solyc11g011660.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 9.1e-08 60.5 44 63.6
PGSC0003DMG400013251 Solanum tuberosum HOM05D000695 ORTHO05D000615 9.1e-08 60.5 44 65.9
PGSC0003DMG400013372 Solanum tuberosum HOM05D000695 ORTHO05D000615 9.1e-08 60.5 44 65.9
CAN.G222.82 Capsicum annuum HOM05D000695 ORTHO05D000615 1.2e-07 60.1 47 61.7
Nitab4.5_0001088g0140 Nicotiana tabacum HOM05D000695 ORTHO05D000615 1.2e-07 60.1 45 64.4
Peaxi162Scf00334g00062 Petunia axillaris HOM05D000695 ORTHO05D000615 1.2e-07 60.1 41 73.2
Solyc04g052980.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 1.2e-07 60.1 45 66.7
CAN.G222.118 Capsicum annuum HOM05D000695 ORTHO05D000615 1.5e-07 59.7 47 59.6
CAN.G58.5 Capsicum annuum HOM05D000695 ORTHO05D000615 1.5e-07 59.7 44 65.9
Peaxi162Scf00334g10111 Petunia axillaris HOM05D000695 ORTHO05D000615 1.5e-07 59.7 45 75.6
Peaxi162Scf00464g00324 Petunia axillaris HOM05D000695 ORTHO05D000615 1.5e-07 59.7 41 73.2
PGSC0003DMG400013318 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.5e-07 59.7 44 63.6
Nitab4.5_0003533g0060 Nicotiana tabacum HOM05D000695 ORTHO05D000615 2.0e-07 59.3 46 60.9
Solyc10g052550.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 2.0e-07 59.3 45 73.3
Solyc10g052565.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 2.6e-07 58.9 45 64.4
CAN.G222.127 Capsicum annuum HOM05D000695 ORTHO05D000615 3.4e-07 58.5 44 65.9
Nitab4.5_0002693g0100 Nicotiana tabacum HOM05D000695 ORTHO05D000615 4.5e-07 58.2 39 76.9
Nitab4.5_0007284g0030 Nicotiana tabacum HOM05D000695 ORTHO05D000615 4.5e-07 58.2 44 65.9
Solyc04g052890.3 Solanum lycopersicum HOM05D000695 ORTHO05D000615 4.5e-07 58.2 44 63.6
Sopen04g023290 Solanum pennellii HOM05D000695 ORTHO05D000615 4.5e-07 58.2 37 75.7
PGSC0003DMG400013249 Solanum tuberosum HOM05D001174 ORTHO05D001003 4.5e-07 58.2 44 65.9
CAN.G222.109 Capsicum annuum HOM05D000695 ORTHO05D000615 5.9e-07 57.8 44 65.9
CAN.G222.126 Capsicum annuum HOM05D000695 ORTHO05D000615 5.9e-07 57.8 42 73.8
CAN.G222.131 Capsicum annuum HOM05D000695 ORTHO05D000615 5.9e-07 57.8 44 65.9
Solyc10g052530.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 5.9e-07 57.8 45 73.3
Sopen10g023290 Solanum pennellii HOM05D000695 ORTHO05D000615 5.9e-07 57.8 45 73.3
Peaxi162Scf00168g01124 Petunia axillaris HOM05D000695 ORTHO05D000615 7.7e-07 57.4 44 63.6
Solyc10g052590.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 7.7e-07 57.4 42 73.8
CAN.G222.129 Capsicum annuum HOM05D000695 ORTHO05D000615 1.0e-06 57.0 41 65.9
CAN.G506.4 Capsicum annuum HOM05D000695 ORTHO05D000615 1.0e-06 57.0 44 63.6
PGSC0003DMG400016566 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.0e-06 57.0 44 70.5
PGSC0003DMG400021980 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.0e-06 57.0 42 73.8
CAN.G222.114 Capsicum annuum HOM05D000695 ORTHO05D000615 1.3e-06 56.6 41 68.3
Thecc.02G050700 Theobroma cacao HOM05D000695 ORTHO05D000615 1.3e-06 56.6 44 63.6
Sopen10g023320 Solanum pennellii HOM05D000695 ORTHO05D000615 1.7e-06 56.2 45 71.1
PGSC0003DMG400005027 Solanum tuberosum HOM05D000695 ORTHO05D000615 1.7e-06 56.2 37 73.0
CAN.G506.6 Capsicum annuum HOM05D000695 ORTHO05D000615 2.2e-06 55.8 44 59.1
Solyc04g052910.3 Solanum lycopersicum HOM05D000695 ORTHO05D000615 2.2e-06 55.8 44 61.4
Solyc04g052990.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 2.2e-06 55.8 36 75.0
Sopen04g023310 Solanum pennellii HOM05D000695 ORTHO05D000615 2.2e-06 55.8 40 72.5
PGSC0003DMG400039638 Solanum tuberosum HOM05D000695 ORTHO05D000615 2.2e-06 55.8 45 71.1
Nitab4.5_0001088g0080 Nicotiana tabacum HOM05D000695 ORTHO05D000615 2.9e-06 55.5 42 64.3
PGSC0003DMG400016594 Solanum tuberosum HOM05D000695 ORTHO05D000615 2.9e-06 55.5 36 72.2
CAN.G222.115 Capsicum annuum HOM05D000695 ORTHO05D000615 3.8e-06 55.1 44 63.6
CAN.G222.119 Capsicum annuum HOM05D000695 ORTHO05D000615 3.8e-06 55.1 44 61.4
Nitab4.5_0001421g0070 Nicotiana tabacum HOM05D000695 ORTHO05D000615 3.8e-06 55.1 42 66.7
Solyc10g052560.1 Solanum lycopersicum HOM05D000695 ORTHO05D000615 5.0e-06 54.7 42 71.4
Nitab4.5_0010400g0010 Nicotiana tabacum HOM05D000695 ORTHO05D000615 6.5e-06 54.3 33 72.7
Peaxi162Scf00464g00323 Petunia axillaris HOM05D000695 ORTHO05D000615 6.5e-06 54.3 44 61.4
PGSC0003DMG400036633 Solanum tuberosum HOM05D000695 ORTHO05D000615 8.5e-06 53.9 36 69.4
PGSC0003DMG404013254 Solanum tuberosum HOM05D000695 ORTHO05D000615 8.5e-06 53.9 36 69.4
GSVIVG01023916001 Vitis vinifera HOM05D000695 ORTHO05D438300 8.5e-06 53.9 34 73.5


User provided reference genes

Program Settings