Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002691g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.9e-48 194.9 99 100.0
CAN.G929.2 Capsicum annuum HOM05D001070 ORTHO05D002096 5.0e-24 114.4 60 91.7
Nitab4.5_0023521g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 5.0e-24 114.4 60 90.0
Nitab4.5_0004137g0050 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.6e-22 109.4 60 90.0
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 2.3e-21 105.5 56 85.7
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 2.3e-21 105.5 56 85.7
Nn031s41609 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.9e-21 103.6 60 81.7
Nn064s42217 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.9e-21 103.6 60 81.7
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.9e-21 103.6 60 81.7
Nn212s45207 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.9e-21 103.6 60 81.7
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.9e-21 103.6 60 81.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.2e-20 103.2 55 87.3
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 1.2e-20 103.2 57 91.2
Peaxi162Scf00080g00524 Petunia axillaris HOM05D001070 ORTHO05D002096 2.0e-20 102.4 86 66.3
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 3.4e-20 101.7 50 96.0
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.4e-20 101.7 50 96.0
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.4e-20 101.7 50 96.0
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.4e-20 101.7 50 96.0
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.4e-20 101.7 50 96.0
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.4e-20 101.7 50 96.0
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.4e-20 101.7 60 83.3
AL7G50370 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
A04p09360 Brassica napus HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolC2t10590H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC28t60312H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC28t60368H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC29t60500H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC29t60620H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC29t60623H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC35t60697H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC35t60698H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC37t60788H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC44t60817H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC44t60828H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC45t60915H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BolSC46t60964H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BraSC103t45423Z Brassica rapa HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BraSC138t45540Z Brassica rapa HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BraSC159t45727Z Brassica rapa HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BraSC25t45916Z Brassica rapa HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BraSC48t46237Z Brassica rapa HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
BraSC54t46367Z Brassica rapa HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
CARHR282400 Cardamine hirsuta HOM05D001070 ORTHO05D002096 4.4e-20 101.3 60 80.0
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 5.8e-20 100.9 58 81.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 5.8e-20 100.9 58 81.0
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.8e-20 100.9 60 80.0
Migut.D01245 Erythranthe guttata HOM05D001070 ORTHO05D002096 7.5e-20 100.5 52 90.4
Nn029s41580 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.3e-19 99.8 53 86.8
Solyc01g017240.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.9e-19 98.6 60 78.3
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 3.7e-19 98.2 61 78.7
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 3.7e-19 98.2 55 85.5
PSO541G0682 Papaver somniferum HOM05D001070 ORTHO05D002096 3.7e-19 98.2 58 79.3
PGR081G0002 Punica granatum HOM05D001070 ORTHO05D002096 3.7e-19 98.2 60 78.3
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.7e-19 98.2 60 78.3
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 6.4e-19 97.4 50 90.0
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 6.4e-19 97.4 50 90.0
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 1.4e-18 96.3 54 79.6
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.9e-18 95.9 57 78.9
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.9e-18 95.9 51 92.2
Nn2g13236 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.4e-18 95.5 56 80.4
Solyc11g044670.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.2e-18 95.1 50 90.0
Gohir.1Z049492 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.1e-18 94.7 60 75.0
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.1e-18 94.7 60 75.0
Gohir.A09G046100 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.1e-18 94.7 60 75.0
Gohir.D13G086633 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.1e-18 94.7 60 75.0
RcHm_v2.0_Chr7g0221181 Rosa chinensis HOM05D001070 ORTHO05D002096 9.2e-18 93.6 60 75.0
HanXRQChr00c0336g0573731 Helianthus annuus HOM05D001070 ORTHO05D002096 1.2e-17 93.2 60 73.3
HanXRQChr00c0561g0575891 Helianthus annuus HOM05D001070 ORTHO05D002096 1.6e-17 92.8 52 80.8
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.6e-17 92.8 51 88.2
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 3.5e-17 91.7 60 73.3
Gohir.D03G074712 Gossypium hirsutum HOM05D001070 ORTHO05D002096 3.5e-17 91.7 60 73.3
HanXRQChr17g0557701 Helianthus annuus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 60 71.7
Hund08795 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund17849 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund27460 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund27646 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund27754 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund27829 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund28436 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund28590 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund28611 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund29319 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund29401 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund29519 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Hund29746 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.5e-17 91.7 67 64.2
Gohir.A04G057652 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.6e-17 91.3 60 71.7
Gohir.A11G056832 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.6e-17 91.3 60 71.7
Hund22091 Selenicereus undatus HOM05D001070 ORTHO05D002096 6.0e-17 90.9 67 64.2
Gohir.A10G117450 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.7e-16 89.4 60 71.7
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 6.6e-16 87.4 60 70.0
Hund29395 Selenicereus undatus HOM05D001070 ORTHO05D002096 8.6e-16 87.0 60 68.3
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 7.3e-15 84.0 65 64.6
Lsat_1_v5_gn_6_14481 Lactuca sativa HOM05D001070 ORTHO05D002096 1.8e-13 79.3 54 64.8
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 8.9e-13 77.0 43 86.0
Gohir.D05G248050 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.2e-12 76.6 47 70.2
HPP92_028431 Vanilla planifolia HOM05D001070 ORTHO05D002096 4.4e-12 74.7 57 64.9
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 5.8e-12 74.3 73 52.1
Gorai.009G258900 Gossypium raimondii HOM05D001070 ORTHO05D002096 9.9e-12 73.6 43 72.1
HanXRQChr09g0258561 Helianthus annuus HOM05D001070 ORTHO05D002096 9.9e-12 73.6 41 78.0
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 9.9e-12 73.6 50 78.0
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.2e-11 72.4 39 87.2
HanXRQChr17g0557821 Helianthus annuus HOM05D001070 ORTHO05D002096 2.9e-11 72.0 40 77.5
CSS0027235 Camellia sinensis var. sinensis HOM05D001070 ORTHO05D002096 3.7e-11 71.6 42 83.3
Lju5009P0T27 Lonicera japonica HOM05D001070 ORTHO05D002096 3.7e-11 71.6 65 61.5
HanXRQChr14g0428451 Helianthus annuus HOM05D001070 ORTHO05D002096 4.9e-11 71.2 41 75.6
HanXRQChr14g0428511 Helianthus annuus HOM05D001070 ORTHO05D002096 4.9e-11 71.2 41 75.6
HanXRQChr11g0347371 Helianthus annuus HOM05D001070 ORTHO05D002096 6.4e-11 70.9 41 75.6
Gohir.A09G216580 Gossypium hirsutum HOM05D001070 ORTHO05D002096 8.3e-11 70.5 40 77.5
HanXRQChr14g0430911 Helianthus annuus HOM05D001070 ORTHO05D002096 1.1e-10 70.1 38 78.9
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.4e-10 69.7 65 53.8
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.9e-10 69.3 46 71.7
HanXRQChr11g0336631 Helianthus annuus HOM05D001070 ORTHO05D002096 5.4e-10 67.8 41 75.6
Medtr1g110440 Medicago truncatula HOM05D001070 ORTHO05D002096 5.4e-10 67.8 66 51.5
Hund27834 Selenicereus undatus HOM05D001070 ORTHO05D002096 4.6e-09 64.7 68 51.5
HanXRQChr17g0569781 Helianthus annuus HOM05D001070 ORTHO05D002096 7.8e-09 63.9 42 71.4
HanXRQChr12g0376641 Helianthus annuus HOM05D001070 ORTHO05D002096 3.0e-08 62.0 35 80.0
Oeu011446.1 Olea europaea HOM05D001070 ORTHO05D002096 1.1e-07 60.1 35 77.1
Oeu011447.1 Olea europaea HOM05D001070 ORTHO05D002096 1.1e-07 60.1 35 77.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.9e-07 59.3 34 79.4
MELO3C030628.2 Cucumis melo HOM05D001070 ORTHO05D002096 4.3e-07 58.2 36 69.4
Solyc01g017480.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 9.5e-07 57.0 38 73.7


User provided reference genes

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