Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002691g0030 Nicotiana tabacum HOM05D000814 ORTHO05D010801 2.3e-67 258.8 139 100.0
Nitab4.5_0000021g0270 Nicotiana tabacum HOM05D000814 ORTHO05D010801 1.5e-50 203.0 151 77.5
Peaxi162Scf01650g00054 Petunia axillaris HOM05D000814 ORTHO05D010801 6.2e-44 181.0 151 68.2
CAN.G65.137 Capsicum annuum HOM05D000017 ORTHO05D010801 7.3e-37 157.5 162 58.0
Sopen06g029300 Solanum pennellii HOM05D000814 ORTHO05D010801 7.3e-37 157.5 157 61.8
PGSC0003DMG400027027 Solanum tuberosum HOM05D000814 ORTHO05D010801 1.2e-36 156.8 157 61.8
Solyc06g072940.3 Solanum lycopersicum HOM05D000814 ORTHO05D010801 1.6e-36 156.4 155 61.9
Nitab4.5_0003012g0120 Nicotiana tabacum HOM05D000814 ORTHO05D010801 1.2e-31 140.2 152 61.2
Peaxi162Scf00815g00245 Petunia axillaris HOM05D000814 ORTHO05D010801 1.6e-28 129.8 141 58.9
Nitab4.5_0000115g0240 Nicotiana tabacum HOM05D000814 ORTHO05D010801 2.1e-28 129.4 149 59.7
Actinidia28269 Actinidia chinensis HOM05D001955 ORTHO05D010801 1.3e-22 110.2 161 49.7
Rhsim09G0211600 Rhododendron simsii HOM05D000814 ORTHO05D010801 3.9e-22 108.6 170 48.8
Cc02_g00510 Coffea canephora HOM05D000814 ORTHO05D010801 1.1e-19 100.5 162 50.0
SalBow4G0636 Salvia bowleyana HOM05D000814 ORTHO05D010801 1.7e-17 93.2 155 43.9
Migut.F00113 Erythranthe guttata HOM05D000814 ORTHO05D010801 2.9e-17 92.4 151 47.0
Hma1.2p1_0115F.1_g055880 Hydrangea macrophylla HOM05D000814 ORTHO05D010801 1.1e-16 90.5 155 47.1
Dinv17272 Davidia involucrata HOM05D000265 ORTHO05D000161 1.4e-16 90.1 154 47.4
TAR375G0489 Trochodendron aralioides HOM05D000814 ORTHO05D010801 2.1e-15 86.3 151 42.4
CiPaw.07G182300 Carya illinoinensis HOM05D000814 ORTHO05D010801 4.6e-15 85.1 150 42.7
QL09p026761 Quercus lobata HOM05D000814 ORTHO05D010801 6.0e-15 84.7 159 39.0
FAN03G2606 Fragaria x ananassa HOM05D000814 ORTHO05D010801 5.1e-14 81.6 155 42.6
FAN10G0979 Fragaria x ananassa HOM05D000814 ORTHO05D010801 5.1e-14 81.6 155 42.6
Oeu061050.1 Olea europaea HOM05D000814 ORTHO05D010801 1.9e-13 79.7 155 41.9
FAN01G2037 Fragaria x ananassa HOM05D000814 ORTHO05D010801 2.5e-13 79.3 155 41.9
FAN10G4056 Fragaria x ananassa HOM05D000814 ORTHO05D010801 3.3e-13 79.0 155 41.9
RcHm_v2.0_Chr1g0383381 Rosa chinensis HOM05D000814 ORTHO05D010801 5.6e-13 78.2 149 43.0
FvH4_7g33410 Fragaria vesca HOM05D000814 ORTHO05D010801 2.8e-12 75.9 155 40.6
Lj3A891T44 Lonicera japonica HOM05D000814 ORTHO05D010801 1.4e-11 73.6 154 39.6
MD07G1304200 Malus domestica HOM05D000814 ORTHO05D010801 1.4e-11 73.6 153 41.2
Nn6g33675 Nelumbo nucifera HOM05D000814 ORTHO05D010801 2.9e-09 65.9 153 34.6
Prupe.2G322800 Prunus persica HOM05D000814 ORTHO05D010801 4.9e-09 65.1 84 51.2
Manes.08G165450 Manihot esculenta HOM05D000814 ORTHO05D010801 4.2e-08 62.0 85 50.6
SalBow4G0353 Salvia bowleyana HOM05D000814 ORTHO05D010801 7.1e-08 61.2 91 45.1
MD10G1255700 Malus domestica HOM05D000814 ORTHO05D010801 9.3e-08 60.8 154 37.0
HPP92_014868 Vanilla planifolia HOM05D000814 ORTHO05D010801 2.1e-07 59.7 91 42.9
SHI24445 Sapria himalayana HOM05D000814 ORTHO05D010801 1.7e-06 56.6 120 35.8
Zm00001eb024150 Zea mays HOM05D000814 ORTHO05D010801 8.7e-06 54.3 99 39.4


User provided reference genes

Program Settings