Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.4e-167 592.8 284 100.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 6.5e-117 424.5 300 72.0
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 2.1e-115 419.5 300 71.3
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 2.1e-115 419.5 300 72.0
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.8e-112 409.1 301 71.4
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 1.4e-111 406.8 296 71.6
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 2.7e-110 402.5 300 69.0
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.4e-95 351.7 264 72.0
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 5.9e-94 348.2 291 61.5
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.3e-93 347.1 290 62.4
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 6.6e-93 344.7 289 60.6
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.1e-92 344.0 275 64.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 3.3e-92 342.4 295 61.7
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 4.3e-92 342.0 290 61.7
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.3e-92 342.0 290 61.7
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 5.6e-92 341.7 283 61.1
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.1e-91 339.7 283 59.7
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 3.6e-91 339.0 278 61.9
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 6.2e-91 338.2 283 59.7
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.0e-90 337.4 283 60.8
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.0e-90 337.4 295 59.0
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.0e-90 337.4 289 61.6
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 6.8e-90 334.7 248 67.7
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 6.8e-90 334.7 261 64.4
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 2.0e-89 333.2 244 66.4
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 2.6e-89 332.8 287 58.5
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 2.6e-89 332.8 281 61.2
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 4.4e-89 332.0 270 62.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 5.8e-89 331.6 257 63.8
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 7.5e-89 331.3 296 59.5
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 7.5e-89 331.3 283 58.7
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 7.5e-89 331.3 283 59.4
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 9.8e-89 330.9 281 61.6
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.7e-88 330.1 277 62.8
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 1.7e-88 330.1 276 60.5
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 2.9e-88 329.3 248 66.5
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 3.7e-88 328.9 281 60.9
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 3.7e-88 328.9 256 63.7
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 3.7e-88 328.9 282 59.2
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 4.9e-88 328.6 283 58.3
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 6.4e-88 328.2 258 62.0
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.4e-87 327.0 283 59.0
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 3.2e-87 325.9 267 62.5
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 3.2e-87 325.9 282 59.9
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 3.2e-87 325.9 255 63.5
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.1e-87 325.5 316 56.0
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 5.4e-87 325.1 283 58.7
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 9.2e-87 324.3 277 58.1
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.6e-86 323.6 259 62.2
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.0e-86 323.2 293 57.0
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 2.7e-86 322.8 270 59.6
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 6.0e-86 321.6 294 57.5
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.0e-85 320.9 283 58.3
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.3e-85 320.5 283 59.7
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.3e-85 319.7 297 56.2
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 2.3e-85 319.7 292 55.5
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 5.0e-85 318.5 284 57.4
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 5.0e-85 318.5 319 54.5
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 2.5e-84 316.2 274 58.8
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 4.3e-84 315.5 257 58.8
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 4.3e-84 315.5 254 61.8
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.2e-83 313.9 272 58.5
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 2.1e-83 313.2 282 57.4
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 2.1e-83 313.2 289 55.4
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 3.6e-83 312.4 254 58.3
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 6.2e-83 311.6 294 55.8
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 8.1e-83 311.2 259 59.5
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.1e-82 310.8 273 60.1
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.1e-82 310.8 277 59.9
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 1.8e-82 310.1 277 59.6
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.0e-81 306.6 275 58.9
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 2.6e-81 306.2 276 57.2
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 3.4e-81 305.8 270 59.6
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 4.4e-81 305.4 276 57.2
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 7.5e-81 304.7 290 56.2
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.3e-80 303.9 276 56.5
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.3e-80 303.9 276 56.5
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 1.3e-80 303.9 251 58.2
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.7e-80 303.5 264 58.7
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 2.2e-80 303.1 276 56.2
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.4e-79 300.4 298 53.4
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 5.4e-79 298.5 324 50.3
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 7.1e-79 298.1 284 54.9
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 6.0e-78 295.0 305 52.1
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 8.6e-77 291.2 257 55.3
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.6e-75 287.0 218 67.0
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 2.8e-75 286.2 203 69.5
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.4e-74 283.9 265 59.2
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 4.0e-74 282.3 262 55.3
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 6.8e-74 281.6 261 57.5
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 5.8e-73 278.5 354 45.8
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.3e-72 277.3 285 56.1
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 1.9e-71 273.5 283 55.5
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 3.0e-69 266.2 256 54.7
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 3.4e-65 252.7 273 50.2
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 1.3e-64 250.8 251 51.4
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 1.4e-63 247.3 218 58.3
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.4e-63 247.3 256 49.2
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 4.2e-63 245.7 248 50.8
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 7.1e-63 245.0 216 56.9
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 2.1e-62 243.4 256 48.0
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 9.3e-55 218.0 386 39.1
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 3.4e-49 199.5 160 58.8
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.4e-49 199.5 148 64.9
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 6.4e-48 195.3 312 37.2
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 8.4e-48 194.9 203 51.7
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 2.6e-41 173.3 163 54.0
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 2.5e-39 166.8 189 48.7
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 4.2e-39 166.0 148 54.7
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.6e-38 162.5 143 63.6
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 5.5e-31 139.0 126 61.1
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.1e-23 114.8 117 50.4
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 1.9e-23 114.0 247 30.8
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.6e-22 110.9 118 48.3
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.1e-18 98.2 74 67.6
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.5e-15 87.0 55 78.2
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 1.8e-13 80.9 225 25.8
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 6.5e-08 62.4 38 73.7
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.5e-07 61.2 40 75.0
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 2.1e-06 57.4 67 46.3


User provided reference genes

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