Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.0e-179 633.3 306 100.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 4.5e-148 528.1 305 84.6
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.3e-147 526.6 306 85.0
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 1.5e-146 523.1 305 83.9
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 4.1e-141 505.0 306 82.7
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 1.6e-140 503.1 306 81.4
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.6e-122 441.4 288 78.1
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.2e-112 408.3 301 71.4
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.0e-111 406.4 302 65.9
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 2.6e-111 406.0 297 68.4
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 4.4e-111 405.2 307 68.1
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.9e-110 402.5 289 66.8
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 8.3e-110 401.0 289 66.8
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.4e-109 399.4 291 68.7
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 5.4e-109 398.3 294 68.0
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 7.0e-109 397.9 289 67.1
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 7.0e-109 397.9 292 68.8
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.2e-109 397.5 293 67.2
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.2e-108 397.1 293 67.9
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.6e-108 396.7 293 67.9
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 4.6e-108 395.2 292 66.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 6.0e-108 394.8 301 67.8
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 7.8e-108 394.4 292 67.1
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 5.1e-107 391.7 297 67.7
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 1.1e-106 390.6 294 64.6
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.5e-106 390.2 289 66.4
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 1.5e-106 390.2 292 65.8
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 3.3e-106 389.0 302 66.9
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.3e-106 388.7 308 63.3
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 4.3e-106 388.7 305 63.6
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 5.6e-106 388.3 293 64.5
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 5.6e-106 388.3 288 68.1
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 7.3e-106 387.9 326 62.0
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.2e-105 387.1 293 65.5
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.6e-105 386.7 305 63.9
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 1.6e-105 386.7 305 63.6
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 2.1e-105 386.3 287 69.7
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 2.8e-105 386.0 289 67.8
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 2.8e-105 386.0 287 68.6
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 2.8e-105 386.0 292 67.5
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 3.6e-105 385.6 293 63.8
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 6.2e-105 384.8 290 65.2
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 1.1e-104 384.0 297 66.0
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.8e-104 383.3 306 66.7
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.0e-104 382.1 293 65.5
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 8.9e-104 380.9 300 64.0
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 1.5e-103 380.2 298 62.8
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.5e-103 380.2 296 63.9
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 3.4e-103 379.0 296 63.9
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 3.4e-103 379.0 286 67.1
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 3.4e-103 379.0 304 63.8
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 4.4e-103 378.6 292 63.4
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.7e-102 376.7 286 66.8
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.9e-102 375.9 296 63.2
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 8.3e-102 374.4 294 62.9
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 8.3e-102 374.4 308 62.7
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.4e-101 373.6 340 57.1
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 5.4e-101 371.7 295 62.7
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 7.1e-101 371.3 290 62.8
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 7.1e-101 371.3 292 62.7
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 2.1e-100 369.8 291 63.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 2.7e-100 369.4 300 61.3
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 5.1e-99 365.2 289 63.0
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.9e-98 363.2 304 60.9
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 4.7e-97 358.6 301 59.1
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 8.1e-97 357.8 293 61.1
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.1e-96 357.5 287 61.7
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.4e-96 357.1 295 61.4
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 2.4e-96 356.3 291 59.5
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.4e-96 356.3 294 62.2
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.4e-96 356.3 293 61.1
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 2.4e-96 356.3 294 61.9
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 5.2e-96 355.1 293 60.1
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.2e-95 354.0 300 59.7
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 2.0e-95 353.2 301 57.5
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 2.0e-95 353.2 323 56.7
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.0e-95 353.2 295 60.0
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 2.2e-94 349.7 291 60.1
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 4.9e-94 348.6 293 59.4
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 6.4e-94 348.2 291 60.1
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 8.4e-94 347.8 301 60.5
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 8.4e-94 347.8 224 75.4
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 5.4e-93 345.1 291 58.8
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 7.1e-93 344.7 291 59.5
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 7.1e-93 344.7 291 59.5
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 3.0e-91 339.3 261 65.1
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 7.3e-90 334.7 291 57.4
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 7.3e-90 334.7 291 61.5
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 4.0e-88 328.9 299 54.2
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.7e-86 323.6 301 58.5
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 2.4e-85 319.7 367 48.2
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 5.3e-80 302.0 229 66.4
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.5e-79 298.9 291 54.6
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 6.4e-78 295.0 288 54.5
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 6.7e-75 285.0 286 51.7
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.6e-73 280.4 286 50.7
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 8.1e-73 278.1 287 50.9
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 2.0e-71 273.5 287 51.2
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 2.0e-71 273.5 305 47.9
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 1.0e-70 271.2 270 53.3
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 7.9e-68 261.5 183 67.8
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.3e-67 260.0 228 59.6
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 2.1e-65 253.4 443 39.5
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 2.2e-57 226.9 201 57.7
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 3.7e-57 226.1 184 57.6
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 5.3e-56 222.2 297 43.8
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 5.5e-53 212.2 173 58.4
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 4.6e-52 209.1 343 37.6
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 2.0e-47 193.7 208 52.9
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 9.4e-45 184.9 143 67.1
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 3.1e-40 169.9 168 54.2
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 1.2e-26 124.8 393 23.9
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 2.0e-23 114.0 233 31.3
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 2.2e-22 110.5 122 50.0
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 4.7e-20 102.8 71 71.8
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 4.7e-20 102.8 124 45.2
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 3.4e-18 96.7 67 64.2
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.7e-15 87.0 53 81.1


User provided reference genes

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