Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002684g0040 Nicotiana tabacum HOM05D000007 ORTHO05D013549 2.7e-163 578.6 279 100.0
Peaxi162Scf00001g04112 Petunia axillaris HOM05D000007 ORTHO05D013549 2.8e-80 302.8 339 51.9
Peaxi162Scf00001g00418 Petunia axillaris HOM05D000007 ORTHO05D013549 1.1e-76 290.8 339 49.9
Peaxi162Scf00001g04121 Petunia axillaris HOM05D000007 ORTHO05D013549 7.4e-73 278.1 326 49.7
CAN.G175.11 Capsicum annuum HOM05D000004 ORTHO05D013549 3.7e-56 222.6 271 49.4
PGSC0003DMG400028432 Solanum tuberosum HOM05D000007 ORTHO05D013549 8.0e-51 204.9 328 40.9
CAN.G411.76 Capsicum annuum HOM05D000007 ORTHO05D000039 5.7e-49 198.7 328 42.1
PGSC0003DMG400028431 Solanum tuberosum HOM05D000007 ORTHO05D013549 1.6e-46 190.7 329 39.2
Sopen02g021380 Solanum pennellii HOM05D000007 ORTHO05D013549 4.5e-46 189.1 328 38.1
Solyc02g072423.1 Solanum lycopersicum HOM05D000007 ORTHO05D013549 7.7e-46 188.3 328 38.4
Solyc02g072420.1 Solanum lycopersicum HOM05D000007 ORTHO05D013549 2.5e-44 183.3 330 38.5
Sopen02g021370 Solanum pennellii HOM05D000007 ORTHO05D013549 5.5e-44 182.2 330 38.8
Nitab4.5_0002395g0010 Nicotiana tabacum HOM05D000007 ORTHO05D013549 7.2e-44 181.8 269 46.5
CAN.G175.10 Capsicum annuum HOM05D000007 ORTHO05D013549 3.6e-43 179.5 217 49.3
Sopen02g021360 Solanum pennellii HOM05D000007 ORTHO05D013549 1.0e-29 134.8 244 36.9
CAN.G411.80 Capsicum annuum HOM05D000007 ORTHO05D013549 3.5e-22 109.8 108 50.9
Oeu009216.3 Olea europaea HOM05D000007 ORTHO05D000017 1.7e-21 107.5 328 27.4
Oeu030915.1 Olea europaea HOM05D000007 ORTHO05D000039 2.8e-19 100.1 341 24.0
CAN.G175.9 Capsicum annuum HOM05D000007 ORTHO05D013549 7.5e-17 92.0 127 47.2
Oeu031249.1 Olea europaea HOM05D000007 ORTHO05D000039 3.5e-14 83.2 326 26.4
Oeu002398.1 Olea europaea HOM05D000007 ORTHO05D000039 5.1e-13 79.3 215 28.4
DCAR_004302 Daucus carota HOM05D000007 ORTHO05D000039 8.6e-13 78.6 217 30.0
Prupe.3G013500 Prunus persica HOM05D000007 ORTHO05D000039 2.5e-12 77.0 200 29.0
RcHm_v2.0_Chr1g0344741 Rosa chinensis HOM05D000007 ORTHO05D000039 7.3e-12 75.5 216 29.2
Nitab4.5_0005219g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.1e-11 73.9 217 28.1
Manes.07G039200 Manihot esculenta HOM05D000007 ORTHO05D000039 8.1e-11 72.0 222 26.6
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 1.1e-10 71.6 183 26.2
Lj2P943T5 Lonicera japonica HOM05D000007 ORTHO05D000017 1.1e-10 71.6 183 26.2
RcHm_v2.0_Chr1g0344471 Rosa chinensis HOM05D000007 ORTHO05D000039 3.1e-10 70.1 212 26.4
FvH4_3g40660 Fragaria vesca HOM05D000007 ORTHO05D000017 8.9e-10 68.6 222 28.4
FAN16G3614 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.9e-10 68.6 222 28.4
PSO339G2134 Papaver somniferum HOM05D000007 ORTHO05D000017 8.9e-10 68.6 216 26.4
PSO017G0579 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-09 68.2 260 24.2
FAN11G2499 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.5e-09 67.8 221 27.6
QL04p045916 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-09 67.4 246 24.4
CAN.G58.20 Capsicum annuum HOM05D000007 ORTHO05D000017 5.8e-09 65.9 229 26.2
HanXRQChr02g0058161 Helianthus annuus HOM05D000007 ORTHO05D000017 7.6e-09 65.5 187 30.5
PSO675G4126 Papaver somniferum HOM05D000007 ORTHO05D000017 7.6e-09 65.5 219 25.1
Haze_20972 Corylus avellana HOM05D000007 ORTHO05D000039 1.3e-08 64.7 153 32.7
HanXRQChr12g0361101 Helianthus annuus HOM05D000007 ORTHO05D000017 1.3e-08 64.7 188 27.1
PSO541G3853 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-08 64.7 185 26.5
QL04p045658 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-08 64.7 220 25.5
SGA_v2.0_scaffold5G02615 Striga asiatica HOM05D000007 ORTHO05D000039 1.3e-08 64.7 242 27.3
Cfa017234 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.2e-08 63.9 153 32.0
arahy.Tifrunner.gnm1.ann1.F3ZHRM Arachis hypogaea HOM05D000007 ORTHO05D000017 2.9e-08 63.5 220 26.4
PSO384G4310 Papaver somniferum HOM05D000007 ORTHO05D000017 2.9e-08 63.5 133 32.3
QL09p022536 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-08 63.5 233 25.3
HanXRQChr02g0058331 Helianthus annuus HOM05D000007 ORTHO05D000017 4.9e-08 62.8 199 27.6
QL04p045941 Quercus lobata HOM05D000007 ORTHO05D000039 4.9e-08 62.8 153 28.8
Medtr5g091150 Medicago truncatula HOM05D000007 ORTHO05D000039 6.4e-08 62.4 150 26.0
Nitab4.5_0001655g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.4e-08 62.4 142 29.6
Oeu041753.1 Olea europaea HOM05D058779 ORTHO05D000039 6.4e-08 62.4 236 24.2
SGA_v2.0_scaffold5G02617 Striga asiatica HOM05D000007 ORTHO05D000039 6.4e-08 62.4 213 25.8
arahy.Tifrunner.gnm1.ann1.DDZ1HR Arachis hypogaea HOM05D000007 ORTHO05D000017 8.4e-08 62.0 220 25.9
RcHm_v2.0_Chr2g0154611 Rosa chinensis HOM05D000007 ORTHO05D000017 8.4e-08 62.0 228 24.6
DCAR_010588 Daucus carota HOM05D000007 ORTHO05D000039 1.1e-07 61.6 227 27.3
FAN16G3104 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-07 61.6 147 29.3
PSO801G0827 Papaver somniferum HOM05D000007 ORTHO05D000017 1.4e-07 61.2 155 27.7
Lj3C654T4 Lonicera japonica HOM05D000007 ORTHO05D000017 1.9e-07 60.8 238 24.4
Lj3C804T1 Lonicera japonica HOM05D000007 ORTHO05D000017 1.9e-07 60.8 180 28.9
Rhsim09G0013700 Rhododendron simsii HOM05D000007 ORTHO05D000039 1.9e-07 60.8 260 23.8
FAN16G3199 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.4e-07 60.5 157 27.4
Atru.chr1.1381 Acer truncatum HOM05D000007 ORTHO05D000039 3.2e-07 60.1 226 24.8
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 3.2e-07 60.1 151 25.2
Medtr4g108820 Medicago truncatula HOM05D000007 ORTHO05D000017 3.2e-07 60.1 184 29.3
Oeu050288.1 Olea europaea HOM05D000007 ORTHO05D000017 3.2e-07 60.1 191 27.2
CAN.G949.5 Capsicum annuum HOM05D000007 ORTHO05D000017 4.1e-07 59.7 150 30.0
DCAR_004837 Daucus carota HOM05D000007 ORTHO05D000039 4.1e-07 59.7 184 28.8
FAN23G1318 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.1e-07 59.7 228 27.2
Lj1C663T4 Lonicera japonica HOM05D000007 ORTHO05D000039 4.1e-07 59.7 143 30.1
PSO339G5797 Papaver somniferum HOM05D000007 ORTHO05D000017 4.1e-07 59.7 144 27.8
Migut.N00067 Erythranthe guttata HOM05D000007 ORTHO05D000017 5.4e-07 59.3 210 27.1
Lj2P695T9 Lonicera japonica HOM05D000007 ORTHO05D000017 5.4e-07 59.3 147 29.3
AUR62015902 Chenopodium quinoa HOM05D000007 ORTHO05D000017 7.1e-07 58.9 220 23.2
AUR62019385 Chenopodium quinoa HOM05D000007 ORTHO05D012960 7.1e-07 58.9 142 27.5
MD12G1213000 Malus domestica HOM05D000007 ORTHO05D000039 7.1e-07 58.9 184 25.0
ECA234G0956 Erigeron canadensis HOM05D000007 ORTHO05D000039 1.2e-06 58.2 133 23.3
QL04p037119 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-06 58.2 153 27.5
RcHm_v2.0_Chr2g0154601 Rosa chinensis HOM05D000007 ORTHO05D000017 1.2e-06 58.2 227 25.1
Ciclev10012020m.g Citrus clementina HOM05D000007 ORTHO05D000017 1.6e-06 57.8 156 26.3
DCAR_010444 Daucus carota HOM05D000007 ORTHO05D018280 1.6e-06 57.8 161 26.7
FAN26G3234 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-06 57.8 173 27.2
Lj1C663T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-06 57.8 143 30.1
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.1e-06 57.4 268 22.8
PSO541G5905 Papaver somniferum HOM05D000007 ORTHO05D000017 2.1e-06 57.4 145 26.2
TAR624G0498 Trochodendron aralioides HOM05D000007 ORTHO05D000017 2.1e-06 57.4 214 28.5
Haze_05543 Corylus avellana HOM05D000007 ORTHO05D000017 2.7e-06 57.0 158 30.4
Eucgr.H02734 Eucalyptus grandis HOM05D000007 ORTHO05D000017 2.7e-06 57.0 212 23.1
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 2.7e-06 57.0 141 28.4
Psat4g059960 Pisum sativum HOM05D000007 ORTHO05D000039 3.5e-06 56.6 163 28.2
Haze_13292 Corylus avellana HOM05D000007 ORTHO05D000039 4.6e-06 56.2 170 26.5
Dinv30114 Davidia involucrata HOM05D000007 ORTHO05D000039 4.6e-06 56.2 141 29.1
Duzib114G0799 Durio zibethinus HOM05D000007 ORTHO05D000039 4.6e-06 56.2 223 24.2
FvH4_6g06663 Fragaria vesca HOM05D000007 ORTHO05D000039 4.6e-06 56.2 222 25.7
FvH4_6g33740 Fragaria vesca HOM05D000007 ORTHO05D000017 4.6e-06 56.2 227 25.6
FvH4_6g40070 Fragaria vesca HOM05D000027 ORTHO05D000066 4.6e-06 56.2 215 26.5
FAN09G3678 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.6e-06 56.2 227 25.6
FAN14G1591 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.6e-06 56.2 215 26.5
FAN14G2437 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.6e-06 56.2 227 25.6
Peaxi162Scf00912g00112 Petunia axillaris HOM05D000007 ORTHO05D000017 4.6e-06 56.2 142 30.3
QL04p019522 Quercus lobata HOM05D000007 ORTHO05D000039 4.6e-06 56.2 161 26.7
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 4.6e-06 56.2 151 25.2
Thecc.10G169400 Theobroma cacao HOM05D000007 ORTHO05D000039 4.6e-06 56.2 165 26.7
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.6e-06 56.2 153 28.1
COL.COLO4_11920 Corchorus olitorius HOM05D000007 ORTHO05D000039 6.0e-06 55.8 154 28.6
FAN05G1410 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.0e-06 55.8 227 26.4
FAN09G0423 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.0e-06 55.8 215 26.0
MD07G1058900 Malus domestica HOM05D000007 ORTHO05D000017 6.0e-06 55.8 139 25.9
Medtr3g083640 Medicago truncatula HOM05D000007 ORTHO05D000017 6.0e-06 55.8 216 24.5
PSO675G0549 Papaver somniferum HOM05D000007 ORTHO05D000017 6.0e-06 55.8 154 24.7
Psat4g060000 Pisum sativum HOM05D000007 ORTHO05D000039 6.0e-06 55.8 163 28.2
CAN.G650.17 Capsicum annuum HOM05D000007 ORTHO05D000039 7.8e-06 55.5 141 28.4
Dinv44143 Davidia involucrata HOM05D000007 ORTHO05D000039 7.8e-06 55.5 244 24.2
PSO832G0042 Papaver somniferum HOM05D000007 ORTHO05D000017 7.8e-06 55.5 149 27.5
RcHm_v2.0_Chr5g0001381 Rosa chinensis HOM05D000007 ORTHO05D000017 7.8e-06 55.5 149 26.2
GSVIVG01031692001 Vitis vinifera HOM05D000007 ORTHO05D000017 7.8e-06 55.5 215 25.1


User provided reference genes

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