Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.5e-77 291.6 151 100.0
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.4e-70 267.7 156 90.4
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.5e-67 258.8 157 89.2
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 2.1e-61 239.2 155 81.9
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 1.0e-60 236.9 155 81.3
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.7e-60 234.2 157 80.3
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.5e-59 232.3 157 80.3
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 4.8e-58 228.0 155 79.4
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.4e-57 225.7 140 82.9
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.9e-55 218.0 122 91.0
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 8.4e-55 217.2 142 81.7
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.4e-54 216.5 119 92.4
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 3.2e-54 215.3 120 90.8
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 7.1e-54 214.2 128 82.8
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 7.1e-54 214.2 141 78.0
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 9.3e-54 213.8 144 78.5
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.2e-53 213.4 120 90.0
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 2.7e-53 212.2 121 86.0
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.7e-53 212.2 120 90.0
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.5e-53 211.8 143 77.6
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 3.5e-53 211.8 143 76.9
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 3.5e-53 211.8 122 85.2
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 4.6e-53 211.5 118 90.7
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 6.0e-53 211.1 157 72.6
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 6.0e-53 211.1 119 87.4
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 6.0e-53 211.1 129 81.4
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 6.0e-53 211.1 158 72.2
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 7.9e-53 210.7 158 71.5
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 7.9e-53 210.7 143 76.9
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 7.9e-53 210.7 141 78.0
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.0e-52 210.3 130 80.0
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.3e-52 209.9 117 89.7
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 1.8e-52 209.5 117 90.6
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.8e-52 209.5 117 90.6
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 160 71.9
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 160 71.9
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 160 71.9
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.8e-52 209.5 117 88.9
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.8e-52 209.5 142 76.8
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 2.3e-52 209.1 143 77.6
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 3.0e-52 208.8 117 89.7
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 3.9e-52 208.4 146 76.7
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 5.1e-52 208.0 120 88.3
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 5.1e-52 208.0 137 77.4
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 5.1e-52 208.0 144 77.1
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.1e-52 208.0 115 89.6
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 5.1e-52 208.0 149 75.2
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 6.7e-52 207.6 153 71.2
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 8.7e-52 207.2 158 71.5
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 8.7e-52 207.2 155 72.3
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.1e-51 206.8 137 79.6
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.1e-51 206.8 117 88.9
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 1.1e-51 206.8 130 83.1
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 3.3e-51 205.3 137 75.9
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 4.3e-51 204.9 138 79.0
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 4.3e-51 204.9 136 79.4
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 7.4e-51 204.1 148 73.6
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 7.4e-51 204.1 116 87.1
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 7.4e-51 204.1 117 88.0
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.6e-51 203.8 140 76.4
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.6e-51 203.8 140 76.4
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 1.3e-50 203.4 116 86.2
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 1.3e-50 203.4 116 86.2
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.3e-50 203.4 116 86.2
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.3e-50 203.4 116 86.2
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.3e-50 203.4 122 84.4
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.3e-50 203.4 122 84.4
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.3e-50 203.4 120 85.8
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 1.3e-50 203.4 121 84.3
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.3e-50 203.4 120 85.8
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.1e-50 202.6 137 75.9
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 2.1e-50 202.6 119 86.6
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.1e-50 202.6 153 71.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 3.7e-50 201.8 117 88.0
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 4.8e-50 201.4 161 68.3
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 6.2e-50 201.1 117 87.2
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 6.2e-50 201.1 126 81.0
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 2.4e-49 199.1 122 82.0
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 2.4e-49 199.1 118 87.3
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 3.1e-49 198.7 120 85.0
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 9.0e-49 197.2 117 86.3
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 9.0e-49 197.2 117 86.3
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.0e-49 197.2 140 74.3
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 9.0e-49 197.2 121 84.3
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.5e-48 196.4 116 85.3
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 2.0e-48 196.1 116 84.5
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 3.4e-48 195.3 116 84.5
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 2.9e-47 192.2 115 87.0
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 6.5e-47 191.0 106 87.7
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 4.6e-45 184.9 116 79.3
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 3.1e-41 172.2 121 70.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.7e-39 166.4 120 74.2
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 2.5e-38 162.5 93 88.2
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 1.6e-37 159.8 91 89.0
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.6e-37 159.8 91 85.7
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.0e-36 157.1 123 69.1
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.3e-36 156.8 93 83.9
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.3e-36 156.8 104 72.1
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 6.7e-36 154.5 112 72.3
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.9e-35 152.9 115 69.6
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.8e-34 149.1 97 76.3
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 6.3e-34 147.9 102 73.5
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 6.3e-34 147.9 87 83.9
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 1.5e-32 143.3 104 69.2
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.0e-32 142.9 89 80.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.4e-32 142.1 88 79.5
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.2e-31 139.4 102 70.6
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.5e-30 136.0 113 63.7
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.0e-15 87.4 64 75.0
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 5.5e-14 81.6 74 54.1
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.5e-11 73.6 110 41.8
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 3.8e-07 58.9 107 37.4
SMO171G0068 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 9.4e-06 54.3 107 34.6


User provided reference genes

Program Settings