Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002682g0080 Nicotiana tabacum HOM05D006032 ORTHO05D007544 1.3e-146 523.1 268 100.0
Nitab4.5_0006802g0050 Nicotiana tabacum HOM05D006032 ORTHO05D007544 1.2e-144 516.5 268 98.1
PGSC0003DMG400001748 Solanum tuberosum HOM05D006032 ORTHO05D007544 1.0e-127 460.3 269 90.0
Sopen09g002430 Solanum pennellii HOM05D006032 ORTHO05D007544 1.1e-126 456.8 267 89.5
CAN.G1091.3 Capsicum annuum HOM05D006032 ORTHO05D007544 6.1e-125 451.1 273 86.8
Cc02_g38440 Coffea canephora HOM05D006032 ORTHO05D007544 1.9e-118 429.5 266 80.8
Hma1.2p1_2961F.1_g330870 Hydrangea macrophylla HOM05D006032 ORTHO05D007544 6.8e-116 421.0 266 80.8
Lj7A509T108 Lonicera japonica HOM05D006032 ORTHO05D007544 3.4e-115 418.7 270 80.0
DCAR_006944 Daucus carota HOM05D006032 ORTHO05D007544 3.7e-114 415.2 267 81.3
CSS0027447 Camellia sinensis var. sinensis HOM05D006032 ORTHO05D007544 6.0e-112 407.9 267 77.2
Atru.chr5.551 Acer truncatum HOM05D006032 ORTHO05D007544 1.5e-110 403.3 267 77.2
SalBow3G2277 Salvia bowleyana HOM05D006032 ORTHO05D007544 1.5e-110 403.3 267 77.9
MSTRG.20857 Avicennia marina HOM05D006032 ORTHO05D007544 7.3e-110 401.0 267 77.9
Ciclev10021696m.g Citrus clementina HOM05D006032 ORTHO05D007544 7.3e-110 401.0 270 76.7
COL.COLO4_12764 Corchorus olitorius HOM05D006032 ORTHO05D007544 1.8e-108 396.4 267 76.0
HanXRQChr06g0170291 Helianthus annuus HOM05D006032 ORTHO05D007544 5.2e-108 394.8 263 77.6
Nn1g01650 Nelumbo nucifera HOM05D006032 ORTHO05D007544 8.9e-108 394.0 265 74.7
Oeu054338.1 Olea europaea HOM05D006032 ORTHO05D007544 8.9e-108 394.0 264 75.4
ECA236G4677 Erigeron canadensis HOM05D006032 ORTHO05D007544 5.8e-107 391.3 263 76.0
Haze_15552 Corylus avellana HOM05D006032 ORTHO05D007544 8.3e-106 387.5 265 74.0
MELO3C006088.2 Cucumis melo HOM05D006032 ORTHO05D007544 1.1e-105 387.1 275 74.5
Lsat_1_v5_gn_7_3801 Lactuca sativa HOM05D006032 ORTHO05D007544 1.4e-105 386.7 266 75.2
ClCG05G001320 Citrullus lanatus HOM05D006032 ORTHO05D007544 4.1e-105 385.2 274 75.5
Migut.B01790 Erythranthe guttata HOM05D006032 ORTHO05D007544 4.1e-105 385.2 266 75.2
PGR031G1164 Punica granatum HOM05D006032 ORTHO05D007544 4.1e-105 385.2 272 73.9
Cfa003882 Carpinus fangiana HOM05D006032 ORTHO05D007544 2.7e-104 382.5 265 73.6
TWI59G0434 Tripterygium wilfordii HOM05D006032 ORTHO05D007544 3.5e-104 382.1 263 74.9
Thecc.01G353900 Theobroma cacao HOM05D006032 ORTHO05D007544 4.6e-104 381.7 267 73.8
CsaV3_3G008690 Cucumis sativus L. HOM05D006032 ORTHO05D007544 1.7e-103 379.8 275 73.1
SGA_v2.0_scaffold95G28814 Striga asiatica HOM05D006032 ORTHO05D007544 1.7e-103 379.8 276 72.5
GSVIVG01027006001 Vitis vinifera HOM05D006032 ORTHO05D007544 3.0e-103 379.0 269 72.9
Manes.01G253200 Manihot esculenta HOM05D006032 ORTHO05D007544 2.5e-102 375.9 266 72.9
Glyma.09G255500 Glycine max HOM05D006032 ORTHO05D007544 7.3e-102 374.4 271 70.8
Cpa.g.sc184.23 Carica papaya HOM05D006032 ORTHO05D007544 6.2e-101 371.3 270 70.7
QL04p055082 Quercus lobata HOM05D006032 ORTHO05D007544 6.2e-101 371.3 269 73.2
Glyma.18G237400 Glycine max HOM05D006032 ORTHO05D007544 1.1e-100 370.5 271 71.2
CiPaw.01G065600 Carya illinoinensis HOM05D006032 ORTHO05D007544 1.4e-100 370.2 266 72.6
CANSAT56G0440 Cannabis sativa HOM05D006032 ORTHO05D007544 2.4e-100 369.4 270 70.7
Rhsim12G0138500 Rhododendron simsii HOM05D006032 ORTHO05D007544 3.1e-100 369.0 273 70.7
Sed0022476 Sechium edule HOM05D006032 ORTHO05D007544 3.1e-100 369.0 273 72.9
Gorai.001G158300 Gossypium raimondii HOM05D006032 ORTHO05D007544 8.9e-100 367.5 263 72.2
Gohir.A07G140700 Gossypium hirsutum HOM05D006032 ORTHO05D007544 1.5e-99 366.7 269 70.6
Gohir.D07G146100 Gossypium hirsutum HOM05D006032 ORTHO05D007544 1.5e-99 366.7 263 72.2
Lalb_Chr19g0126911 Lupinus albus HOM05D006032 ORTHO05D007544 1.5e-99 366.7 267 69.7
Potri.002G154600 Populus trichocarpa HOM05D006032 ORTHO05D007544 3.4e-99 365.5 272 70.6
Sabra02G0122600 Salix brachista HOM05D006032 ORTHO05D007544 3.4e-99 365.5 274 70.8
Eucgr.D02319 Eucalyptus grandis HOM05D006032 ORTHO05D007544 5.8e-99 364.8 264 70.5
arahy.Tifrunner.gnm1.ann1.S0M071 Arachis hypogaea HOM05D006032 ORTHO05D007544 9.9e-99 364.0 274 69.7
arahy.Tifrunner.gnm1.ann1.XQ5AKE Arachis hypogaea HOM05D006032 ORTHO05D007544 9.9e-99 364.0 273 69.2
BcaB01g02282 Brassica carinata HOM05D006032 ORTHO05D007544 9.9e-99 364.0 266 71.1
Carub.0006s3637 Capsella rubella HOM05D006032 ORTHO05D007544 4.9e-98 361.7 267 68.9
VMungo1383G0296 Vigna mungo HOM05D006032 ORTHO05D007544 4.9e-98 361.7 269 70.6
Thhalv10028885m.g Eutrema salsugineum HOM05D006032 ORTHO05D007544 1.1e-97 360.5 268 69.4
CARHR249010 Cardamine hirsuta HOM05D006032 ORTHO05D007544 1.9e-97 359.8 271 68.6
Sp6g00830 Schrenkiella parvula HOM05D006032 ORTHO05D007544 1.9e-97 359.8 268 68.3
BcaC04g24141 Brassica carinata HOM05D006032 ORTHO05D007544 3.2e-97 359.0 266 69.9
Prupe.2G175800 Prunus persica HOM05D006032 ORTHO05D007544 3.2e-97 359.0 266 70.7
BcaB01g02152 Brassica carinata HOM05D006032 ORTHO05D007544 9.2e-97 357.5 264 70.5
C03p38990 Brassica napus HOM05D006032 ORTHO05D007544 9.2e-97 357.5 264 68.9
THA.LOC104817034 Tarenaya hassleriana HOM05D006032 ORTHO05D007544 9.2e-97 357.5 273 68.5
PSO782G5129 Papaver somniferum HOM05D006032 ORTHO05D007544 1.2e-96 357.1 274 69.3
AL6G52090 Arabidopsis lyrata HOM05D006032 ORTHO05D007544 1.6e-96 356.7 267 68.5
BcaC01g06855 Brassica carinata HOM05D006032 ORTHO05D007544 1.6e-96 356.7 264 69.3
BolC3t16171H Brassica oleracea HOM05D006032 ORTHO05D007544 1.6e-96 356.7 264 69.3
Phvul.008G059200 Phaseolus vulgaris HOM05D006032 ORTHO05D007544 1.6e-96 356.7 272 69.5
Sc01g0003280 Simmondsia chinensis HOM05D006032 ORTHO05D007544 6.0e-96 354.8 257 69.3
TAR629G0912 Trochodendron aralioides HOM05D006032 ORTHO05D007544 6.0e-96 354.8 265 68.3
AT4G01310 Arabidopsis thaliana HOM05D006032 ORTHO05D007544 7.8e-96 354.4 261 69.0
PSO478G3538 Papaver somniferum HOM05D006032 ORTHO05D007544 3.0e-95 352.4 274 69.0
Peaxi162Scf00815g00338 Petunia axillaris HOM05D006032 ORTHO05D007544 3.0e-95 352.4 183 95.1
Aqoxy7G00233 Aquilegia oxysepala HOM05D006032 ORTHO05D007544 3.9e-95 352.1 263 70.0
MD01G1069800 Malus domestica HOM05D006032 ORTHO05D007544 1.1e-94 350.5 263 69.2
Lj4g0026145 Lotus japonicus HOM05D006032 ORTHO05D007544 1.9e-94 349.7 277 66.8
ATR0661G584 Amborella trichopoda HOM05D006032 ORTHO05D007544 2.5e-94 349.4 232 75.0
Ca_00819_v3 Cicer arietinum L. HOM05D006032 ORTHO05D007544 7.3e-94 347.8 274 66.8
MD07G1132700 Malus domestica HOM05D006032 ORTHO05D007544 2.1e-93 346.3 263 69.6
Medtr7g078800 Medicago truncatula HOM05D006032 ORTHO05D007544 2.1e-93 346.3 266 67.7
FvH4_7g15110 Fragaria vesca HOM05D006032 ORTHO05D007544 4.7e-93 345.1 261 68.6
AUR62022608 Chenopodium quinoa HOM05D006032 ORTHO05D007544 6.2e-93 344.7 263 68.1
CDE12G0723 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 8.1e-93 344.4 252 69.4
AUR62004402 Chenopodium quinoa HOM05D006032 ORTHO05D007544 8.1e-93 344.4 263 67.7
FAN10G0977 Fragaria x ananassa HOM05D006032 ORTHO05D007544 8.1e-93 344.4 261 67.4
FAN10G2244 Fragaria x ananassa HOM05D006032 ORTHO05D007544 8.1e-93 344.4 261 67.4
FAN06G2046 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.1e-92 344.0 261 68.2
FAN06G3864 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.1e-92 344.0 261 68.2
FAN03G1341 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.4e-92 343.6 259 68.0
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 1.8e-92 343.2 251 70.9
CDE04G3178 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 1.8e-92 343.2 226 73.0
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 2.4e-92 342.8 251 70.9
RcHm_v2.0_Chr1g0357301 Rosa chinensis HOM05D006032 ORTHO05D007544 3.1e-92 342.4 261 67.8
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 5.3e-92 341.7 262 66.8
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 5.3e-92 341.7 262 66.8
Psat3g107160 Pisum sativum HOM05D006032 ORTHO05D007544 6.9e-92 341.3 272 66.5
TPR.G22296 Trifolium pratense HOM05D006032 ORTHO05D007544 9.0e-92 340.9 273 66.3
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 2.2e-90 336.3 246 68.7
HPP92_025634 Vanilla planifolia HOM05D006032 ORTHO05D007544 1.9e-89 333.2 237 70.0
unitig_22.g5344 Utricularia gibba HOM05D003213 ORTHO05D003693 5.4e-89 331.6 218 74.8
EL10Ac1g00366 Beta vulgaris HOM05D006032 ORTHO05D007544 1.2e-88 330.5 309 59.5
Potri.014G089100 Populus trichocarpa HOM05D006032 ORTHO05D007544 1.5e-86 323.6 261 65.9
Hund27251 Selenicereus undatus HOM05D006032 ORTHO05D007544 4.8e-85 318.5 233 68.7
vmacro20901 Vaccinium macrocarpon HOM05D006032 ORTHO05D007544 1.1e-81 307.4 270 62.2
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 3.2e-81 305.8 263 62.7
Os03g0125000 Oryza sativa ssp. japonica HOM05D006032 ORTHO05D007544 3.5e-80 302.4 218 67.4
Zm00001eb001840 Zea mays HOM05D006032 ORTHO05D007544 1.8e-79 300.1 221 66.5
Dinv32511 Davidia involucrata HOM05D006032 ORTHO05D007544 4.8e-77 292.0 228 66.2
Solyc09g007560.4 Solanum lycopersicum HOM05D006032 ORTHO05D007544 2.0e-75 286.6 177 86.4
A03p31970 Brassica napus HOM05D006032 ORTHO05D007544 5.1e-71 271.9 196 72.4
BraA03t12369Z Brassica rapa HOM05D006032 ORTHO05D007544 5.1e-71 271.9 196 72.4
FAN01G2970 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.4e-68 263.8 191 68.6
MBI04_g41504_MAGBIO Magnolia biondii HOM05D006032 ORTHO05D007544 1.4e-68 263.8 265 56.6
Mapoly0001s0334 Marchantia polymorpha HOM05D006032 ORTHO05D007544 1.7e-66 256.9 239 54.0
AagrBONN_evm.TU.Sc2ySwM_228.1445 Anthoceros agrestis HOM05D006032 ORTHO05D007544 2.3e-63 246.5 194 57.2
Pp3c1_25850 Physcomitrium patens HOM05D006032 ORTHO05D007544 1.9e-62 243.4 251 48.6
Pp3c2_17110 Physcomitrium patens HOM05D006032 ORTHO05D007544 1.9e-62 243.4 222 50.0
SMO358G0099 Selaginella moellendorffii HOM05D006032 ORTHO05D007544 9.7e-62 241.1 180 61.1
MSTRG.17292 Avicennia marina HOM05D006032 ORTHO05D007544 3.6e-56 222.6 134 84.3
SEGI_08351 Sequoiadendron giganteum HOM05D006032 ORTHO05D007544 3.3e-54 216.1 141 71.6
Haze_27649 Corylus avellana HOM05D006032 ORTHO05D007544 4.1e-44 182.6 153 52.9
Rhsim01G0165400 Rhododendron simsii HOM05D006032 ORTHO05D007544 9.1e-44 181.4 164 63.4
COL.COLO4_27391 Corchorus olitorius HOM05D006032 ORTHO05D007544 3.8e-42 176.0 113 75.2
Cfa021143 Carpinus fangiana HOM05D006032 ORTHO05D001488 2.7e-40 169.9 165 46.1
C02p38190 Brassica napus HOM05D006032 ORTHO05D007544 1.5e-38 164.1 265 40.8
BolC2t09834H Brassica oleracea HOM05D006032 ORTHO05D007544 1.5e-38 164.1 265 40.8
BcaC03g16053 Brassica carinata HOM05D006032 ORTHO05D007544 2.6e-38 163.3 265 40.8
Sabra14G0064700 Salix brachista HOM05D006032 ORTHO05D007544 3.7e-37 159.5 115 66.1
Nitab4.5_0000681g0060 Nicotiana tabacum HOM05D006032 ORTHO05D007544 1.0e-31 141.4 70 97.1
Actinidia02824 Actinidia chinensis HOM05D006032 ORTHO05D007544 5.2e-31 139.0 89 78.7
Nitab4.5_0000681g0050 Nicotiana tabacum HOM05D006032 ORTHO05D007544 7.5e-30 135.2 76 90.8
SMO196G0051 Selaginella moellendorffii HOM05D006032 ORTHO05D007544 1.7e-26 124.0 179 36.9
VMungo1309G2152 Vigna mungo HOM05D006032 ORTHO05D007544 1.1e-20 104.8 70 74.3
Cfa024600 Carpinus fangiana HOM05D006032 ORTHO05D122942 2.1e-16 90.5 170 32.9
VMungo0647G0507 Vigna mungo HOM05D006032 ORTHO05D007227 1.0e-15 88.2 58 74.1
Rhsim12G0138600 Rhododendron simsii HOM05D006032 ORTHO05D007544 2.0e-14 84.0 92 56.5
Psat2g092280 Pisum sativum HOM05D006032 ORTHO05D007544 4.4e-14 82.8 60 68.3
unitig_8.g3788 Utricularia gibba HOM05D006032 ORTHO05D007544 2.7e-11 73.6 102 44.1
Dinv43855 Davidia involucrata HOM05D006032 ORTHO05D007544 1.0e-10 71.6 39 84.6
FvH4_5g19211 Fragaria vesca HOM05D006032 ORTHO05D197553 2.6e-06 57.0 43 69.8


User provided reference genes

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