Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 7.6e-121 437.2 222 100.0
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.6e-97 359.0 205 89.3
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.3e-91 340.1 222 77.9
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.2e-89 333.6 222 76.1
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 4.2e-87 325.1 222 74.8
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 3.4e-60 235.7 223 54.3
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 7.5e-60 234.6 221 55.7
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 2.2e-59 233.0 224 55.8
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 8.3e-59 231.1 226 55.8
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.4e-58 230.3 221 52.9
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 2.0e-57 226.5 222 53.2
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 7.7e-57 224.6 219 55.7
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 1.0e-56 224.2 222 52.3
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 1.1e-55 220.7 227 52.4
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 2.1e-54 216.5 221 52.5
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 3.6e-54 215.7 224 51.8
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 1.0e-53 214.2 228 51.3
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.8e-53 213.4 224 53.6
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.8e-53 213.4 223 51.1
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 5.7e-52 208.4 220 48.6
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 5.7e-52 208.4 230 51.7
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.3e-51 207.2 236 50.8
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 2.2e-51 206.5 225 51.1
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 8.3e-51 204.5 227 50.7
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.1e-50 204.1 226 50.9
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 1.4e-50 203.8 209 53.6
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 2.4e-50 203.0 231 51.5
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 5.4e-50 201.8 227 49.8
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-49 200.3 220 50.9
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-49 200.3 220 50.9
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 4.6e-49 198.7 253 45.1
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 5.9e-49 198.4 222 51.8
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 8.6e-48 194.5 213 48.8
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 1.1e-47 194.1 231 48.1
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 3.1e-45 186.0 246 48.0
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 8.9e-45 184.5 249 45.0
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 1.3e-43 180.6 269 42.8
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 2.9e-43 179.5 224 47.3
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 2.9e-43 179.5 261 42.9
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 6.4e-43 178.3 247 46.6
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 7.8e-41 171.4 247 42.9
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.1e-39 167.5 209 45.9
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.4e-37 160.6 226 42.5
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 5.2e-37 158.7 222 46.4
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 2.2e-35 153.3 235 43.0
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 3.7e-35 152.5 219 40.6
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.7e-32 143.7 126 58.7
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 8.9e-29 131.3 195 44.6
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 2.6e-28 129.8 258 35.7
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 1.1e-26 124.4 200 39.5
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 3.2e-26 122.9 164 47.6
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 7.8e-25 118.2 176 44.3
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 7.8e-25 118.2 164 45.7
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 5.1e-24 115.5 161 46.0
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 6.6e-24 115.2 161 45.3
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 6.6e-24 115.2 161 45.3
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 2.5e-23 113.2 217 39.6
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 4.4e-20 102.4 75 62.7
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.8e-17 91.7 74 56.8
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 3.9e-16 89.4 147 40.8
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 8.7e-16 88.2 199 36.7
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 4.5e-12 75.9 122 39.3
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 8.7e-08 61.6 36 69.4


User provided reference genes

Program Settings