Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002669g0010 Nicotiana tabacum HOM05D003667 ORTHO05D004397 9.1e-70 266.9 149 100.0
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.8e-33 146.4 107 78.5
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 2.6e-32 142.5 103 75.7
Solyc05g040090.1 Solanum lycopersicum HOM05D003667 ORTHO05D004397 1.8e-25 119.8 96 69.8
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.2e-24 117.1 108 68.5
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 3.4e-24 115.5 108 65.7
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 1.7e-23 113.2 108 61.1
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 2.9e-23 112.5 109 67.9
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 4.9e-23 111.7 94 63.8
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 5.4e-22 108.2 101 60.4
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 1.0e-20 104.0 101 59.4
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.3e-20 103.6 95 62.1
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.3e-20 103.6 95 62.1
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 3.0e-20 102.4 101 60.4
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 3.9e-20 102.1 126 50.0
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 3.9e-20 102.1 101 59.4
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 8.7e-20 100.9 127 48.8
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 8.7e-20 100.9 127 48.8
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 8.7e-20 100.9 127 48.8
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 1.9e-19 99.8 126 49.2
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 1.9e-19 99.8 101 58.4
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 3.3e-19 99.0 120 49.2
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 3.3e-19 99.0 94 57.4
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 3.3e-19 99.0 101 52.5
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 3.3e-19 99.0 101 55.4
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 4.3e-19 98.6 94 57.4
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 4.3e-19 98.6 94 57.4
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 5.6e-19 98.2 99 55.6
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 7.3e-19 97.8 95 58.9
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 7.3e-19 97.8 128 44.5
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 1.6e-18 96.7 129 46.5
Oeu063104.1 Olea europaea HOM05D003667 ORTHO05D004397 2.1e-18 96.3 94 56.4
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 2.8e-18 95.9 127 47.2
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 2.8e-18 95.9 95 53.7
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 2.8e-18 95.9 96 58.3
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 2.8e-18 95.9 101 56.4
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 2.8e-18 95.9 94 57.4
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 3.6e-18 95.5 101 57.4
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 3.6e-18 95.5 97 55.7
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 4.8e-18 95.1 95 56.8
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 4.8e-18 95.1 99 50.5
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 6.2e-18 94.7 103 55.3
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 6.2e-18 94.7 103 56.3
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 6.2e-18 94.7 93 54.8
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 8.1e-18 94.4 94 56.4
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 1.1e-17 94.0 101 51.5
CSS0038188 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.1e-17 94.0 95 56.8
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 1.1e-17 94.0 97 54.6
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.1e-17 94.0 121 51.2
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 1.1e-17 94.0 101 51.5
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 1.1e-17 94.0 100 58.0
Rhsim02G0195800 Rhododendron simsii HOM05D003667 ORTHO05D004397 1.1e-17 94.0 100 58.0
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 1.1e-17 94.0 95 55.8
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 1.1e-17 94.0 94 55.3
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 1.4e-17 93.6 95 55.8
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 1.4e-17 93.6 120 44.2
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 1.4e-17 93.6 87 58.6
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 1.4e-17 93.6 103 49.5
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 1.8e-17 93.2 95 53.7
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 2.4e-17 92.8 103 48.5
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 2.4e-17 92.8 94 54.3
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 2.4e-17 92.8 94 56.4
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 3.1e-17 92.4 101 55.4
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 3.1e-17 92.4 103 53.4
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 3.1e-17 92.4 101 55.4
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 4.0e-17 92.0 95 53.7
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 4.0e-17 92.0 101 58.4
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 5.3e-17 91.7 95 52.6
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 6.9e-17 91.3 113 46.0
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 6.9e-17 91.3 96 54.2
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 9.0e-17 90.9 96 51.0
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 1.2e-16 90.5 101 47.5
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 1.2e-16 90.5 101 47.5
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.2e-16 90.5 120 47.5
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 1.5e-16 90.1 101 45.5
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 1.5e-16 90.1 126 42.1
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 2.0e-16 89.7 103 53.4
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 2.0e-16 89.7 120 46.7
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 2.0e-16 89.7 120 46.7
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 2.0e-16 89.7 120 46.7
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 2.6e-16 89.4 101 46.5
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 2.6e-16 89.4 101 46.5
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 2.6e-16 89.4 101 46.5
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 4.5e-16 88.6 101 55.4
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 4.5e-16 88.6 99 47.5
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 5.8e-16 88.2 121 45.5
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 7.6e-16 87.8 101 48.5
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 7.6e-16 87.8 103 55.3
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 9.9e-16 87.4 95 47.4
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 9.9e-16 87.4 100 56.0
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.3e-15 87.0 101 44.6
arahy.Tifrunner.gnm1.ann1.835HL2 Arachis hypogaea HOM05D004313 ORTHO05D004397 1.3e-15 87.0 101 50.5
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 1.3e-15 87.0 124 41.1
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 1.3e-15 87.0 101 48.5
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 3.8e-15 85.5 123 39.0
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 3.8e-15 85.5 120 43.3
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 6.4e-15 84.7 107 46.7
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 1.4e-14 83.6 95 51.6
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 1.4e-14 83.6 99 49.5
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 1.9e-14 83.2 98 44.9
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 1.9e-14 83.2 95 52.6
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 2.4e-14 82.8 95 52.6
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 3.2e-14 82.4 122 37.7
Lalb_Chr10g0106511 Lupinus albus HOM05D003667 ORTHO05D004397 4.2e-14 82.0 112 47.3
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 4.2e-14 82.0 102 56.9
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 5.4e-14 81.6 98 42.9
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 5.4e-14 81.6 101 44.6
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 5.4e-14 81.6 116 43.1
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 5.4e-14 81.6 94 50.0
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 7.1e-14 81.3 95 57.9
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 9.3e-14 80.9 95 57.9
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 9.3e-14 80.9 94 46.8
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 1.2e-13 80.5 116 41.4
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.6e-13 80.1 98 42.9
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 2.1e-13 79.7 109 44.0
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 4.6e-13 78.6 101 48.5
arahy.Tifrunner.gnm1.ann1.SS7A45 Arachis hypogaea HOM05D000726 ORTHO05D004397 6.0e-13 78.2 107 48.6
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 7.9e-13 77.8 101 42.6
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 1.3e-12 77.0 90 52.2
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 2.3e-12 76.3 114 38.6
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 2.3e-12 76.3 120 41.7
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 2.3e-12 76.3 101 46.5
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 3.0e-12 75.9 114 38.6
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 5.1e-12 75.1 120 41.7
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 8.7e-12 74.3 107 49.5
Ah.08g213170 Amaranthus hybridus HOM05D003667 ORTHO05D004397 1.9e-11 73.2 126 35.7
arahy.Tifrunner.gnm1.ann1.SJAT5A Arachis hypogaea HOM05D003667 ORTHO05D003672 7.4e-11 71.2 101 46.5
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 2.1e-10 69.7 91 44.0
CAN.G1036.8 Capsicum annuum HOM05D003667 ORTHO05D004397 4.8e-10 68.6 45 71.1
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 8.1e-10 67.8 99 39.4
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 1.4e-09 67.0 70 51.4
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 4.5e-08 62.0 101 38.6
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.2e-07 59.7 91 37.4
AagrBONN_evm.TU.Sc2ySwM_368.3326 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.2e-07 59.7 91 36.3
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.9e-07 59.3 99 36.4
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 3.8e-07 58.9 74 60.8
C04p25660 Brassica napus HOM05D003667 ORTHO05D004397 2.4e-06 56.2 78 39.7
C05p50890 Brassica napus HOM05D003667 ORTHO05D004397 2.4e-06 56.2 78 39.7
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 3.2e-06 55.8 91 36.3
VMungo0720G0063 Vigna mungo HOM05D003667 ORTHO05D004397 3.2e-06 55.8 88 38.6


User provided reference genes

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