Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002667g0080 Nicotiana tabacum HOM05D008093 ORTHO05D009840 3.1e-44 181.4 91 100.0
Nitab4.5_0000856g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 7.9e-40 166.8 91 93.4
Nitab4.5_0013695g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 2.0e-35 152.1 93 83.9
Peaxi162Scf00589g00323 Petunia axillaris HOM05D008093 ORTHO05D009840 7.9e-32 140.2 98 76.5
PGSC0003DMG400028663 Solanum tuberosum HOM05D008093 ORTHO05D009840 1.1e-30 136.3 98 74.5
Solyc11g005930.2 Solanum lycopersicum HOM05D008093 ORTHO05D009840 4.8e-29 131.0 97 74.2
Nitab4.5_0002667g0090 Nicotiana tabacum HOM05D008093 ORTHO05D009840 6.2e-29 130.6 97 73.2
Sopen11g001870 Solanum pennellii HOM05D008093 ORTHO05D009840 1.4e-28 129.4 98 71.4
Cc07_g18370 Coffea canephora HOM05D008093 ORTHO05D009840 3.7e-21 104.8 92 60.9
CsaV3_2G018270 Cucumis sativus L. HOM05D008093 ORTHO05D009840 6.9e-20 100.5 91 58.2
ClCG02G000540 Citrullus lanatus HOM05D008093 ORTHO05D009840 1.2e-19 99.8 89 62.9
QL06p028766 Quercus lobata HOM05D008093 ORTHO05D009840 1.5e-19 99.4 98 59.2
Oeu042288.1 Olea europaea HOM05D008093 ORTHO05D009840 1.0e-18 96.7 90 57.8
Dinv24346 Davidia involucrata HOM05D008093 ORTHO05D009840 2.9e-18 95.1 92 57.6
Actinidia06628 Actinidia chinensis HOM05D008093 ORTHO05D009840 3.8e-18 94.7 88 56.8
Hma1.2p1_0476F.1_g160900 Hydrangea macrophylla HOM05D008093 ORTHO05D009840 3.8e-18 94.7 89 62.9
Oeu033661.1 Olea europaea HOM05D008093 ORTHO05D009840 3.8e-18 94.7 89 53.9
Gohir.A05G385600 Gossypium hirsutum HOM05D008093 ORTHO05D009840 5.0e-18 94.4 90 54.4
MELO3C023245.2 Cucumis melo HOM05D008093 ORTHO05D009840 6.5e-18 94.0 91 57.1
MD02G1150700 Malus domestica HOM05D008093 ORTHO05D009840 1.4e-17 92.8 92 54.3
Potri.005G058800 Populus trichocarpa HOM05D008093 ORTHO05D009840 1.4e-17 92.8 91 56.0
Thecc.01G130900 Theobroma cacao HOM05D008093 ORTHO05D009840 3.2e-17 91.7 95 51.6
CiPaw.04G083000 Carya illinoinensis HOM05D008093 ORTHO05D009840 9.3e-17 90.1 99 54.5
QL06p028768 Quercus lobata HOM05D008093 ORTHO05D009840 9.3e-17 90.1 73 64.4
Sc09g0002370 Simmondsia chinensis HOM05D008093 ORTHO05D009840 1.2e-16 89.7 110 51.8
Nn5g28574 Nelumbo nucifera HOM05D008093 ORTHO05D009840 1.6e-16 89.4 90 54.4
MD15G1265300 Malus domestica HOM05D008093 ORTHO05D009840 2.1e-16 89.0 92 53.3
Gorai.012G034100 Gossypium raimondii HOM05D008093 ORTHO05D009840 2.7e-16 88.6 69 60.9
Manes.12G154600 Manihot esculenta HOM05D008093 ORTHO05D009840 2.7e-16 88.6 90 53.3
Duzib264G0739 Durio zibethinus HOM05D008093 ORTHO05D009840 3.6e-16 88.2 94 53.2
FvH4_1g13550 Fragaria vesca HOM05D008093 ORTHO05D009840 3.6e-16 88.2 100 52.0
FAN26G1298 Fragaria x ananassa HOM05D008093 ORTHO05D009840 3.6e-16 88.2 100 52.0
Gohir.D04G022800 Gossypium hirsutum HOM05D008093 ORTHO05D009840 3.6e-16 88.2 69 60.9
Sed0027082 Sechium edule HOM05D008093 ORTHO05D009840 3.6e-16 88.2 97 54.6
RcHm_v2.0_Chr2g0101941 Rosa chinensis HOM05D008093 ORTHO05D009840 4.6e-16 87.8 97 54.6
Ciclev10002949m.g Citrus clementina HOM05D008093 ORTHO05D009840 6.1e-16 87.4 98 51.0
COL.COLO4_35729 Corchorus olitorius HOM05D008093 ORTHO05D009840 6.1e-16 87.4 101 48.5
Cfa002886 Carpinus fangiana HOM05D008093 ORTHO05D009840 7.9e-16 87.0 86 55.8
CiPaw.04G083200 Carya illinoinensis HOM05D008093 ORTHO05D009840 7.9e-16 87.0 99 52.5
Glyma.08G156600 Glycine max HOM05D008093 ORTHO05D009840 3.9e-15 84.7 94 48.9
Phvul.002G271900 Phaseolus vulgaris HOM05D008093 ORTHO05D009840 3.9e-15 84.7 101 50.5
arahy.Tifrunner.gnm1.ann1.IYM9ZI Arachis hypogaea HOM05D008093 ORTHO05D009840 6.7e-15 84.0 96 46.9
Medtr8g093620 Medicago truncatula HOM05D008093 ORTHO05D009840 8.8e-15 83.6 84 53.6
FAN28G2095 Fragaria x ananassa HOM05D008093 ORTHO05D009840 1.1e-14 83.2 100 51.0
Glyma.05G191500 Glycine max HOM05D008093 ORTHO05D009840 5.7e-14 80.9 105 46.7
MBI03_g00424_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 5.7e-14 80.9 91 52.7
VMungo0251G0054 Vigna mungo HOM05D008093 ORTHO05D009840 7.4e-14 80.5 102 48.0
Potri.007G109200 Populus trichocarpa HOM05D008093 ORTHO05D009840 1.3e-13 79.7 103 46.6
Lalb_Chr07g0184461 Lupinus albus HOM05D008093 ORTHO05D009840 2.2e-13 79.0 93 48.4
EL10Ac4g09593 Beta vulgaris HOM05D008093 ORTHO05D009840 2.8e-13 78.6 102 44.1
Lalb_Chr12g0203141 Lupinus albus HOM05D008093 ORTHO05D009840 3.7e-13 78.2 100 45.0
Prupe.7G152300 Prunus persica HOM05D008093 ORTHO05D009840 4.8e-13 77.8 106 45.3
Ca_17640_v3 Cicer arietinum L. HOM05D008093 ORTHO05D009840 6.3e-13 77.4 88 53.4
Aqoxy5G02237 Aquilegia oxysepala HOM05D008093 ORTHO05D009840 8.2e-13 77.0 97 47.4
Psat7g045640 Pisum sativum HOM05D008093 ORTHO05D009840 8.2e-13 77.0 88 51.1
Eucgr.L03270 Eucalyptus grandis HOM05D008093 ORTHO05D009840 2.4e-12 75.5 90 46.7
FAN23G2512 Fragaria x ananassa HOM05D008093 ORTHO05D009840 3.1e-12 75.1 62 61.3
AUR62006838 Chenopodium quinoa HOM05D008093 ORTHO05D009840 4.1e-12 74.7 50 74.0
Lj4g0016515 Lotus japonicus HOM05D008093 ORTHO05D009840 4.1e-12 74.7 113 40.7
FAN19G1201 Fragaria x ananassa HOM05D008093 ORTHO05D009840 5.3e-12 74.3 62 59.7
MBI06_g29669_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 7.7e-11 70.5 56 62.5
GSVIVG01026494001 Vitis vinifera HOM05D008093 ORTHO05D009840 1.7e-10 69.3 77 51.9
ATR1136G205 Amborella trichopoda HOM05D008093 ORTHO05D009840 5.0e-10 67.8 90 46.7
CARHR241540 Cardamine hirsuta HOM05D010996 ORTHO05D009840 8.5e-10 67.0 97 43.3
Os12g0187800 Oryza sativa ssp. japonica HOM05D008093 ORTHO05D009840 8.5e-10 67.0 52 61.5
AT4G33467 Arabidopsis thaliana HOM05D010996 ORTHO05D009840 1.4e-09 66.2 93 49.5
AL7G18090 Arabidopsis lyrata HOM05D010996 ORTHO05D009840 2.5e-09 65.5 91 42.9
THA.LOC104819498 Tarenaya hassleriana HOM05D010996 ORTHO05D009840 2.5e-09 65.5 91 44.0
Zm00001eb409100 Zea mays HOM05D008093 ORTHO05D009840 2.5e-09 65.5 47 68.1
Sabra07G0089300 Salix brachista HOM05D008093 ORTHO05D009840 4.2e-09 64.7 44 68.2
Zm00001eb138530 Zea mays HOM05D008093 ORTHO05D009840 7.2e-09 63.9 45 66.7
A03p62020 Brassica napus HOM05D010996 ORTHO05D009840 1.6e-08 62.8 95 42.1
BraA03t15242Z Brassica rapa HOM05D010996 ORTHO05D009840 1.6e-08 62.8 95 42.1
Eucgr.H04961 Eucalyptus grandis HOM05D008093 ORTHO05D009840 2.1e-08 62.4 50 54.0
arahy.Tifrunner.gnm1.ann1.Y5JHNR Arachis hypogaea HOM05D008093 ORTHO05D009840 2.7e-08 62.0 47 57.4
C01p05220 Brassica napus HOM05D010996 ORTHO05D009840 3.6e-08 61.6 98 44.9
BolC1t00501H Brassica oleracea HOM05D010996 ORTHO05D009840 3.6e-08 61.6 98 44.9
BcaC09g52160 Brassica carinata HOM05D010996 ORTHO05D009840 7.9e-08 60.5 94 41.5
C07p59670 Brassica napus HOM05D010996 ORTHO05D009840 2.3e-07 58.9 97 43.3
Sp7g31170 Schrenkiella parvula HOM05D010996 ORTHO05D009840 2.3e-07 58.9 99 43.4
A01p04810 Brassica napus HOM05D010996 ORTHO05D009840 6.7e-07 57.4 97 42.3
BraA01t00464Z Brassica rapa HOM05D010996 ORTHO05D009840 6.7e-07 57.4 97 42.3
Thhalv10026675m.g Eutrema salsugineum HOM05D010996 ORTHO05D009840 1.1e-06 56.6 91 42.9
Aa31sc146G10 Aethionema arabicum HOM05D010996 ORTHO05D009840 1.5e-06 56.2 58 48.3
Carub.0007s0701 Capsella rubella HOM05D010996 ORTHO05D009840 2.0e-06 55.8 92 43.5
Psat5g082600 Pisum sativum HOM05D009255 ORTHO05D011239 2.0e-06 55.8 66 42.4
Cpa.g.sc42.146 Carica papaya HOM05D008093 ORTHO05D009840 4.4e-06 54.7 51 54.9
Thecc.08G142600 Theobroma cacao HOM05D029484 ORTHO05D011239 4.4e-06 54.7 74 37.8
Gohir.A02G067700 Gossypium hirsutum HOM05D029484 ORTHO05D011239 5.7e-06 54.3 58 48.3
Gorai.005G083100 Gossypium raimondii HOM05D029484 ORTHO05D011239 5.7e-06 54.3 58 48.3
BcaNung02175 Brassica carinata HOM05D010996 ORTHO05D009840 7.4e-06 53.9 50 56.0
BcaNung05339 Brassica carinata HOM05D000119 ORTHO05D000054 7.4e-06 53.9 50 56.0


User provided reference genes

Program Settings