Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.5e-282 975.7 563 100.0
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.3e-251 872.1 547 93.2
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 2.1e-239 832.4 545 89.0
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 5.8e-234 814.3 581 83.3
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 3.5e-223 778.5 533 86.5
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 5.0e-201 704.9 546 74.0
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 5.7e-197 691.4 527 74.4
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 3.8e-193 678.7 563 73.9
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 2.0e-189 666.4 559 73.7
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 3.9e-182 642.1 591 67.9
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 8.5e-177 624.4 586 68.4
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 9.7e-173 610.9 582 67.0
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 8.0e-167 591.3 578 68.2
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 3.0e-166 589.3 592 68.4
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 5.2e-166 588.6 558 66.7
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 6.3e-164 581.6 465 77.8
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 1.4e-163 580.5 595 64.4
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 2.3e-161 573.2 588 66.7
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 5.0e-161 572.0 587 64.7
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 1.9e-160 570.1 596 64.1
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 4.2e-160 568.9 515 68.0
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 1.6e-159 567.0 603 61.7
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 2.3e-158 563.1 530 69.1
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.2e-157 560.8 582 64.4
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 1.5e-157 560.5 563 65.2
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 2.2e-156 556.6 568 65.1
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 1.1e-155 554.3 583 62.4
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 1.6e-154 550.4 548 63.9
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 3.5e-154 549.3 583 63.3
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 4.5e-154 548.9 581 64.2
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 1.1e-152 544.3 564 64.7
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 2.5e-152 543.1 563 63.8
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 1.2e-151 540.8 590 60.7
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.2e-151 540.8 368 87.8
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 2.1e-151 540.0 572 60.1
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 4.7e-151 538.9 542 64.8
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 6.1e-151 538.5 578 64.0
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 8.0e-151 538.1 543 66.1
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 1.0e-150 537.7 617 56.7
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 1.0e-150 537.7 546 66.3
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 2.3e-150 536.6 543 65.9
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 5.2e-150 535.4 568 61.6
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 3.4e-149 532.7 557 65.0
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 7.5e-149 531.6 556 64.2
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 1.3e-148 530.8 584 63.2
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.9e-147 526.9 540 65.0
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 1.3e-145 520.8 574 61.7
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 1.1e-144 517.7 554 59.6
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.2e-143 514.2 553 60.6
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.6e-143 513.8 676 52.5
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 6.2e-143 511.9 585 61.0
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 5.2e-142 508.8 581 56.8
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 6.8e-142 508.4 547 63.8
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 2.6e-141 506.5 537 61.1
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 1.3e-140 504.2 576 61.5
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 6.4e-140 501.9 559 60.8
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 2.4e-139 500.0 573 61.6
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 3.2e-139 499.6 562 55.7
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 7.1e-139 498.4 568 59.2
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 9.2e-139 498.0 510 62.5
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 4.6e-138 495.7 595 56.6
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.7e-137 493.8 546 61.2
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 8.6e-137 491.5 586 56.1
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 2.5e-136 490.0 573 55.7
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 7.3e-136 488.4 551 59.3
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 7.6e-133 478.4 552 59.2
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 3.7e-132 476.1 518 63.9
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.9e-131 473.8 532 61.7
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 7.8e-130 468.4 576 57.5
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.3e-129 467.6 580 59.5
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 8.6e-129 464.9 559 54.2
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 4.3e-128 462.6 506 61.7
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 4.3e-128 462.6 478 61.9
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 1.6e-127 460.7 547 55.8
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 1.4e-126 457.6 507 63.1
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.8e-126 457.2 530 60.4
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 2.4e-126 456.8 409 70.9
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 4.4e-125 452.6 568 53.2
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 5.8e-125 452.2 587 58.6
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 5.8e-125 452.2 460 66.3
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 9.9e-125 451.4 565 56.3
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 9.3e-123 444.9 586 52.2
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 3.9e-121 439.5 585 57.4
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 1.9e-120 437.2 550 52.4
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 4.3e-120 436.0 451 65.0
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 1.3e-119 434.5 575 55.5
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 3.4e-117 426.4 570 54.6
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 4.2e-115 419.5 566 51.4
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 4.3e-112 409.5 572 53.0
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 2.8e-111 406.8 384 63.3
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 4.8e-111 406.0 546 56.2
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 8.1e-111 405.2 570 53.2
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 1.8e-110 404.1 576 54.3
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 3.1e-110 403.3 571 51.7
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 1.5e-109 401.0 559 54.4
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 2.6e-109 400.2 571 51.5
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 2.6e-109 400.2 571 51.5
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 4.5e-109 399.4 529 56.9
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.9e-107 394.0 494 52.6
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 6.0e-106 389.0 564 51.6
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 5.7e-96 355.9 452 56.4
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 2.2e-92 344.0 214 85.5
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 5.3e-86 322.8 357 66.1
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 1.5e-80 304.7 252 67.1
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 5.7e-80 302.8 207 78.3
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 2.5e-75 287.3 493 51.7
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 5.5e-75 286.2 202 74.8
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 2.0e-61 241.1 249 55.4
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 3.8e-60 236.9 249 55.4
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 1.9e-59 234.6 249 55.0
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 1.2e-58 231.9 271 50.2
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 4.8e-55 219.9 280 48.6
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 1.1e-54 218.8 342 45.0
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 4.1e-54 216.9 237 54.0
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 5.0e-52 209.9 339 42.8
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 2.5e-43 181.0 183 59.0
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 4.7e-42 176.8 249 47.4
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 1.1e-38 165.6 230 44.3
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 7.8e-37 159.5 236 42.4
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 1.3e-36 158.7 285 40.7
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.5e-35 154.5 172 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 1.6e-34 151.8 285 37.9
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 5.2e-33 146.7 148 62.2
Nitab4.5_0005739g0060 Nicotiana tabacum HOM05D004479 ORTHO05D029161 1.9e-30 138.3 95 78.9
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 5.4e-30 136.7 105 69.5
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 1.5e-24 118.6 188 47.3
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.5e-24 118.6 154 46.8
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 7.5e-24 116.3 93 65.6
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 7.5e-24 116.3 208 41.3
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 2.9e-23 114.4 139 54.0
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 3.5e-21 107.5 60 88.3
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 1.3e-20 105.5 69 79.7
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 2.3e-20 104.8 99 60.6
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 5.6e-19 100.1 97 55.7
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 3.4e-16 90.9 152 40.1
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 4.4e-16 90.5 133 44.4
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 3.2e-14 84.3 103 54.4
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 3.0e-12 77.8 109 47.7
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 2.5e-11 74.7 142 39.4
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 9.6e-11 72.8 152 35.5
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 1.2e-10 72.4 52 69.2
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 2.8e-10 71.2 44 77.3
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 3.6e-10 70.9 39 87.2
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 3.6e-10 70.9 39 87.2
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 3.6e-10 70.9 39 87.2
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 3.6e-10 70.9 74 59.5
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 3.6e-10 70.9 191 36.6
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 1.4e-09 68.9 74 54.1
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 2.4e-09 68.2 39 84.6
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 6.8e-09 66.6 87 49.4
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 8.9e-09 66.2 113 42.5
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 8.9e-09 66.2 124 41.1
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 5.8e-08 63.5 69 53.6
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 3.8e-07 60.8 40 82.5
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 3.8e-07 60.8 40 82.5
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 3.8e-07 60.8 40 82.5
Lj5C22T9 Lonicera japonica HOM05D004479 ORTHO05D029161 4.9e-07 60.5 69 62.3
SHI13126 Sapria himalayana HOM05D000105 ORTHO05D000023 6.4e-07 60.1 71 52.1
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 8.4e-07 59.7 41 75.6
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 1.1e-06 59.3 121 41.3
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 1.1e-06 59.3 43 74.4
SHI36675 Sapria himalayana HOM05D004479 ORTHO05D005597 1.9e-06 58.5 54 59.3
COL.COLO4_18371 Corchorus olitorius HOM05D004479 ORTHO05D005597 2.4e-06 58.2 83 42.2
SHI35501 Sapria himalayana HOM05D004479 ORTHO05D005597 3.2e-06 57.8 103 38.8
COL.COLO4_27264 Corchorus olitorius HOM05D004479 ORTHO05D005597 5.4e-06 57.0 59 49.2


User provided reference genes

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