Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 4.6e-200 701.0 358 100.0
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 3.2e-177 625.2 347 91.9
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 6.4e-154 547.7 347 80.4
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 4.6e-152 541.6 345 80.0
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.1e-148 530.4 342 79.5
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.7e-133 479.9 379 67.0
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 4.7e-112 408.7 249 72.7
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 1.4e-108 397.1 249 71.9
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 3.1e-108 396.0 248 73.0
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 1.7e-106 390.2 247 71.7
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 5.0e-106 388.7 251 70.5
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 1.5e-105 387.1 249 68.7
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.9e-105 386.7 287 64.8
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 1.9e-105 386.7 271 65.7
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 2.5e-105 386.3 249 70.3
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 3.6e-104 382.5 249 69.1
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 4.7e-104 382.1 252 67.5
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 6.1e-104 381.7 249 68.7
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 6.1e-104 381.7 252 69.4
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.8e-103 380.2 252 67.9
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 2.3e-103 379.8 249 67.5
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 4.0e-103 379.0 252 67.1
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 6.8e-103 378.3 249 66.3
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 2.0e-102 376.7 252 67.9
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 5.7e-102 375.2 253 66.8
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 5.7e-102 375.2 257 66.5
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 9.8e-102 374.4 298 59.4
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.3e-101 374.0 252 65.1
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.3e-101 374.0 249 67.1
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.7e-101 373.6 252 65.1
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 3.7e-101 372.5 284 59.2
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 8.3e-101 371.3 254 65.7
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.1e-100 370.9 255 65.5
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.1e-100 370.9 237 70.9
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 5.4e-100 368.6 249 65.5
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 9.1e-100 367.9 254 66.1
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 2.0e-99 366.7 253 64.8
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 2.0e-99 366.7 253 67.2
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 2.0e-99 366.7 247 68.8
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.0e-98 364.4 249 65.1
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 1.0e-98 364.4 260 65.0
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 1.3e-98 364.0 250 64.4
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.3e-98 364.0 252 67.1
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.7e-98 363.6 251 64.5
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 1.7e-98 363.6 234 68.4
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 2.9e-98 362.8 249 64.7
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 2.5e-97 359.8 249 64.3
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 4.2e-97 359.0 254 64.2
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 5.5e-97 358.6 249 63.9
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 5.5e-97 358.6 254 64.6
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 2.8e-96 356.3 249 64.7
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 8.0e-96 354.8 249 61.8
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 1.0e-95 354.4 250 64.8
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.0e-95 354.4 336 53.3
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.4e-95 354.0 249 65.1
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 5.2e-95 352.1 250 63.2
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 2.0e-94 350.1 250 63.6
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 2.0e-94 350.1 250 63.6
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 3.4e-94 349.4 266 63.2
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 7.5e-94 348.2 250 63.6
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 9.8e-94 347.8 251 63.7
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.3e-93 347.4 294 58.5
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.2e-93 346.7 269 61.3
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.4e-92 344.0 232 68.1
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 1.8e-92 343.6 236 66.9
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 3.1e-92 342.8 232 67.7
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.6e-90 335.1 281 59.1
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 3.3e-89 332.8 250 62.0
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 7.3e-89 331.6 228 65.4
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 9.5e-89 331.3 250 62.8
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 9.5e-89 331.3 250 62.8
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 8.0e-88 328.2 232 64.7
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.3e-85 320.9 259 61.0
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 1.1e-84 317.8 241 58.1
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 1.6e-83 313.9 246 59.3
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 4.3e-81 305.8 251 58.6
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 3.6e-80 302.8 249 58.6
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 5.8e-78 295.4 249 56.6
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 4.6e-75 285.8 209 63.6
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.3e-74 283.5 256 55.9
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-73 280.0 205 60.5
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.3e-69 267.7 274 51.8
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.4e-63 247.7 222 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 5.2e-55 219.2 255 42.4
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 9.0e-55 218.4 181 58.0
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 2.6e-54 216.9 252 43.3
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 2.7e-51 206.8 144 65.3
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 6.6e-50 202.2 132 65.9
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 2.8e-48 196.8 255 40.0
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 8.4e-45 185.3 246 39.0
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.6e-40 171.0 165 55.2
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.6e-38 163.7 106 65.1
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 4.2e-36 156.4 123 58.5
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 4.8e-32 142.9 83 71.1
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 4.9e-29 132.9 83 71.1
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.5e-29 132.5 278 30.9
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.1e-25 121.7 139 50.4
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 1.4e-23 114.8 84 58.3
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 1.7e-21 107.8 61 70.5
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 7.4e-17 92.4 52 69.2
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 7.4e-17 92.4 52 69.2
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 7.4e-17 92.4 48 83.3
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 2.4e-15 87.4 72 59.7
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 2.4e-15 87.4 72 59.7
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.3e-13 81.6 60 55.0
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 6.1e-11 72.8 45 66.7
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 6.1e-11 72.8 45 66.7
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 4.4e-09 66.6 65 44.6
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 5.7e-09 66.2 53 56.6
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.7e-08 64.7 42 64.3
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 2.8e-08 63.9 42 64.3
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 3.1e-07 60.5 46 54.3
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 7.0e-07 59.3 32 75.0


User provided reference genes

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